; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G004800 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G004800
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionmucin-1
Genome locationchr05:6106259..6106813
RNA-Seq ExpressionLsi05G004800
SyntenyLsi05G004800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066977.1 mucin-1 [Cucumis melo var. makuwa]2.2e-4877.2Show/hide
Query:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASSE-SSPSPTASAP-SSSSEAPTSESPTSSPKSSPSVSPSPA
        MASQSV+VFALIF+AAVAGVFA+APTESPS SPSPKASPSDS+SPSP+SSSPA SPKASSE +SPSP AS+P SSSS+APTS+SPTSSPKSSPSVSPSPA
Subjt:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASSE-SSPSPTASAP-SSSSEAPTSESPTSSPKSSPSVSPSPA

Query:  TDSP-----ADSPADSNADTPTAASPDTDVSSPPSPNAADGP-VADGPF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF
        TDSP     ADSPAD+ ADTPTAASPD+DVSSPPSP+AAD P  ADGP  ADGP ADSPADSPAG  +S  + LK+TSAV GG +A  G +AF
Subjt:  TDSP-----ADSPADSNADTPTAASPDTDVSSPPSPNAADGP-VADGPF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF

XP_008450043.1 PREDICTED: mucin-1 [Cucumis melo]2.2e-4877.2Show/hide
Query:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASSE-SSPSPTASAP-SSSSEAPTSESPTSSPKSSPSVSPSPA
        MASQSV+VFALIF+AAVAGVFA+APTESPS SPSPKASPSDS+SPSP+SSSPA SPKASSE +SPSP AS+P SSSS+APTS+SPTSSPKSSPSVSPSPA
Subjt:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASSE-SSPSPTASAP-SSSSEAPTSESPTSSPKSSPSVSPSPA

Query:  TDSP-----ADSPADSNADTPTAASPDTDVSSPPSPNAADGP-VADGPF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF
        TDSP     ADSPAD+ ADTPTAASPD+DVSSPPSP+AAD P  ADGP  ADGP ADSPADSPAG  +S  + LK+TSAV GG +A  G +AF
Subjt:  TDSP-----ADSPADSNADTPTAASPDTDVSSPPSPNAADGP-VADGPF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF

XP_022934589.1 mucin-1-like [Cucurbita moschata]1.0e-3255.65Show/hide
Query:  MASQS-VIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASS---------------------------------------SPADSPKASS
        MASQS V+VFALIF+AAVAG FA+APT +PS SP+PK++PSDS++ SP+SS                                       +PAD+P ASS
Subjt:  MASQS-VIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASS---------------------------------------SPADSPKASS

Query:  ESSPSPTASAPSSSSEAPTSESPTSSPKSSPSVSPSPATDSPADSPADSNADTPTAASPDTDVSSPPS--PNAADGPVADGPF-------------ADGP
        ESSPSP+ASAP+S SEAP S SP SSP SSPSVSPSPATDSPA SPADS +    AASPD+D SSPPS  P+AAD PVADGP              ADG 
Subjt:  ESSPSPTASAPSSSSEAPTSESPTSSPKSSPSVSPSPATDSPADSPADSNADTPTAASPDTDVSSPPS--PNAADGPVADGPF-------------ADGP

Query:  VADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF
        ++DSPADSP G   S  S LK+TSA   GAVAV GLFAF
Subjt:  VADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF

XP_031737954.1 classical arabinogalactan protein 11 [Cucumis sativus]3.6e-4671.29Show/hide
Query:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASSE-SSPSPTASAPSSSSEAPTSESPTSSPKSSPSVSPSPAT
        MASQ+V+VFALIFLAAVAGVFA+APTESPS SPSPKASPSDS+SPSP+SSSPA SPKAS E +SPSP AS+PSSSS+APTS SPTSSP SSPSVSPSPAT
Subjt:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASSE-SSPSPTASAPSSSSEAPTSESPTSSPKSSPSVSPSPAT

Query:  DSP----------ADSPADSNADTPTAASPDTDVSSPPSPNAADGPVADGP-------------FADGPV-ADSPADSPAGAHRSDASGLKITSAVAGGA
        DSP          ADSPADS ADTPTAASPD+DVSSPPSP+AAD P ADGP              ADGPV ADSPADSPA +  S  + LK+TSA+  G 
Subjt:  DSP----------ADSPADSNADTPTAASPDTDVSSPPSPNAADGPVADGP-------------FADGPV-ADSPADSPAGAHRSDASGLKITSAVAGGA

Query:  VAVVGLFAF
        VA VG FAF
Subjt:  VAVVGLFAF

XP_038887418.1 classical arabinogalactan protein 6-like [Benincasa hispida]4.9e-3567.55Show/hide
Query:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASSESSPSPTASAPSSSSEAPTSESPTSSPKSSPSVSPSPATD
        MASQSV +FALIFLAAVA V A+APT+SPSASPSPKASPSDSKSPSP+SSSPA +PKASSESSPSP ASAPSSSS+APTS+SPT SP SSPSVSPSPA D
Subjt:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASSESSPSPTASAPSSSSEAPTSESPTSSPKSSPSVSPSPATD

Query:  SPADS----PADSNADTPTAASPDTDVSSPPSPNAADGPVADGPFADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF
        SPADS    PADS+ADTPTAASPD         +A+D                          S ASGLK+T AVAGGAVAVVGL AF
Subjt:  SPADS----PADSNADTPTAASPDTDVSSPPSPNAADGPVADGPFADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF

TrEMBL top hitse value%identityAlignment
A0A0A0LDP4 Uncharacterized protein1.2e-3976.74Show/hide
Query:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASSE-SSPSPTASAPSSSSEAPTSESPTSSPKSSPSVSPSPAT
        MASQ+V+VFALIFLAAVAGVFA+APTESPS SPSPKASPSDS+SPSP+SSSPA SPKAS E +SPSP AS+PSSSS+APTS SPTSSP SSPSVSPSPAT
Subjt:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASSE-SSPSPTASAPSSSSEAPTSESPTSSPKSSPSVSPSPAT

Query:  DSP----------ADSPADSNADTPTAASPDTDVSSPPSPNAADGPVADGP-FADGP-VADSP--ADSPAGA
        DSP          ADSPADS ADTPTAASPD+DVSSPPSP+AAD P ADGP  ADGP  AD P  AD P  A
Subjt:  DSP----------ADSPADSNADTPTAASPDTDVSSPPSPNAADGPVADGP-FADGP-VADSP--ADSPAGA

A0A1S3BND1 mucin-11.1e-4877.2Show/hide
Query:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASSE-SSPSPTASAP-SSSSEAPTSESPTSSPKSSPSVSPSPA
        MASQSV+VFALIF+AAVAGVFA+APTESPS SPSPKASPSDS+SPSP+SSSPA SPKASSE +SPSP AS+P SSSS+APTS+SPTSSPKSSPSVSPSPA
Subjt:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASSE-SSPSPTASAP-SSSSEAPTSESPTSSPKSSPSVSPSPA

Query:  TDSP-----ADSPADSNADTPTAASPDTDVSSPPSPNAADGP-VADGPF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF
        TDSP     ADSPAD+ ADTPTAASPD+DVSSPPSP+AAD P  ADGP  ADGP ADSPADSPAG  +S  + LK+TSAV GG +A  G +AF
Subjt:  TDSP-----ADSPADSNADTPTAASPDTDVSSPPSPNAADGP-VADGPF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF

A0A5A7VIK3 Mucin-11.1e-4877.2Show/hide
Query:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASSE-SSPSPTASAP-SSSSEAPTSESPTSSPKSSPSVSPSPA
        MASQSV+VFALIF+AAVAGVFA+APTESPS SPSPKASPSDS+SPSP+SSSPA SPKASSE +SPSP AS+P SSSS+APTS+SPTSSPKSSPSVSPSPA
Subjt:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASSE-SSPSPTASAP-SSSSEAPTSESPTSSPKSSPSVSPSPA

Query:  TDSP-----ADSPADSNADTPTAASPDTDVSSPPSPNAADGP-VADGPF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF
        TDSP     ADSPAD+ ADTPTAASPD+DVSSPPSP+AAD P  ADGP  ADGP ADSPADSPAG  +S  + LK+TSAV GG +A  G +AF
Subjt:  TDSP-----ADSPADSNADTPTAASPDTDVSSPPSPNAADGP-VADGPF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF

A0A6J1F318 mucin-1-like4.9e-3355.65Show/hide
Query:  MASQS-VIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASS---------------------------------------SPADSPKASS
        MASQS V+VFALIF+AAVAG FA+APT +PS SP+PK++PSDS++ SP+SS                                       +PAD+P ASS
Subjt:  MASQS-VIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASS---------------------------------------SPADSPKASS

Query:  ESSPSPTASAPSSSSEAPTSESPTSSPKSSPSVSPSPATDSPADSPADSNADTPTAASPDTDVSSPPS--PNAADGPVADGPF-------------ADGP
        ESSPSP+ASAP+S SEAP S SP SSP SSPSVSPSPATDSPA SPADS +    AASPD+D SSPPS  P+AAD PVADGP              ADG 
Subjt:  ESSPSPTASAPSSSSEAPTSESPTSSPKSSPSVSPSPATDSPADSPADSNADTPTAASPDTDVSSPPS--PNAADGPVADGPF-------------ADGP

Query:  VADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF
        ++DSPADSP G   S  S LK+TSA   GAVAV GLFAF
Subjt:  VADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF

A0A6J1J779 mucin-1-like2.7e-3153.23Show/hide
Query:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASS--------------------------------------------------
        MASQSV+VFALIF+AAVAG FA+APT SPS SP+PK++PSDS++ SP+SS                                                  
Subjt:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASS--------------------------------------------------

Query:  ---------SPADSPKASSESSPSPTASAPSSSSEAPTSESPTSSPKSSPSVSPSPATDSPADSPADSNADTPTAASPDTDVSSPPS--PNAADGPVADG
                 +PAD+P ASSESSPSP ASAP+S SEAP S SP SSP SSPSVSPSP TDSPA SPADS +    AASPD+D SSPPS  P+AAD PVADG
Subjt:  ---------SPADSPKASSESSPSPTASAPSSSSEAPTSESPTSSPKSSPSVSPSPATDSPADSPADSNADTPTAASPDTDVSSPPS--PNAADGPVADG

Query:  PF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGG--AVAVVGLFAF
        P   DGP +DSPAD+P G   S  S LK+TSA   G  AVAV GLFAF
Subjt:  PF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGG--AVAVVGLFAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCAATCTGTTATTGTTTTTGCTCTGATATTCCTCGCGGCTGTCGCCGGAGTTTTTGCTCAGGCACCGACCGAATCCCCTTCGGCATCTCCCTCGCCAAAAGC
TTCCCCATCGGACTCTAAATCGCCTTCTCCGGCTTCTTCTTCTCCCGCAGACTCTCCAAAGGCCTCATCTGAGTCGTCGCCATCCCCGACAGCTTCTGCTCCGTCTTCGT
CCTCCGAGGCTCCAACCAGCGAATCACCTACCAGCTCCCCGAAATCCTCCCCTTCCGTTTCTCCTTCTCCGGCTACTGACTCCCCCGCTGACTCTCCTGCTGACTCCAAT
GCTGACACCCCGACCGCTGCCTCGCCAGATACCGACGTCTCTTCTCCTCCATCCCCTAATGCCGCAGATGGCCCCGTTGCTGATGGCCCTTTTGCCGATGGCCCCGTTGC
TGATTCTCCTGCTGATTCGCCCGCTGGTGCTCATCGCAGCGACGCTTCAGGTCTGAAAATCACCTCTGCCGTTGCCGGTGGTGCCGTCGCCGTTGTCGGACTCTTTGCAT
TCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCAATCTGTTATTGTTTTTGCTCTGATATTCCTCGCGGCTGTCGCCGGAGTTTTTGCTCAGGCACCGACCGAATCCCCTTCGGCATCTCCCTCGCCAAAAGC
TTCCCCATCGGACTCTAAATCGCCTTCTCCGGCTTCTTCTTCTCCCGCAGACTCTCCAAAGGCCTCATCTGAGTCGTCGCCATCCCCGACAGCTTCTGCTCCGTCTTCGT
CCTCCGAGGCTCCAACCAGCGAATCACCTACCAGCTCCCCGAAATCCTCCCCTTCCGTTTCTCCTTCTCCGGCTACTGACTCCCCCGCTGACTCTCCTGCTGACTCCAAT
GCTGACACCCCGACCGCTGCCTCGCCAGATACCGACGTCTCTTCTCCTCCATCCCCTAATGCCGCAGATGGCCCCGTTGCTGATGGCCCTTTTGCCGATGGCCCCGTTGC
TGATTCTCCTGCTGATTCGCCCGCTGGTGCTCATCGCAGCGACGCTTCAGGTCTGAAAATCACCTCTGCCGTTGCCGGTGGTGCCGTCGCCGTTGTCGGACTCTTTGCAT
TCTGA
Protein sequenceShow/hide protein sequence
MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASSESSPSPTASAPSSSSEAPTSESPTSSPKSSPSVSPSPATDSPADSPADSN
ADTPTAASPDTDVSSPPSPNAADGPVADGPFADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF