CuGenDBv2

Gene ID	Lsi05G004840
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	C2H2-type domain-containing protein
Genome location	chr05:6156927..6160975
RNA-Seq Expression	Lsi05G004840
Synteny	Lsi05G004840
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR013087 - Zinc finger C2H2-type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0056275.1 Zinc finger family protein [Cucumis melo var. makuwa]

1.2e-112

75.61

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Query:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF
        MGRRS+ VALLVFS LLSLR HTVSSTLPLQSL Q +        STPKQDWNNAHE+HCSRERSRAAWK+IEEYL+PFVEKKK+EISTKCRLHPDNDMF
Subjt:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF

Query:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI
        RDQEQHKSHLDFNDWKCGYCRKRFYEEKY+DQHFDNRHYNLLN SR+RCLADLCGALHCDHVID VSQKSKCNPAAAARNKHM            L  + 
Subjt:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI

Query:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        F V  G L S HL                  +EFFLRQFCDAHTCSGKPKPFSRGRQ RTS FYIVISVLT+LFV+FFYVF YLY R
Subjt:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR

XP_004145681.1 uncharacterized protein LOC101219582 [Cucumis sativus]

8.3e-111

74.22

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Query:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF
        MGRRS+ VALL+FS LLSLR HTVSSTLPLQSL Q +        STPKQDWNNAHE+HCSRERSRAAWK+IEEYL+PFVEKKK++ISTKCRLHPDNDMF
Subjt:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF

Query:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI
        RDQEQHKSHLDFNDWKCGYCRKRFYEEKY+DQHFDNRHYNLLN SR+RCLADLCGALHCDHVID VSQKSKCNPAAAARNKHM            L  + 
Subjt:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI

Query:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        F V  G L S HL                  +EFFL QFCDAHTCSGKPKPFSRGRQ R S FYIVISVLT+LFV+FFYVF YLY R
Subjt:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR

XP_008450049.1 PREDICTED: uncharacterized protein LOC103491758 [Cucumis melo]

2.0e-112

75.61

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Query:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF
        MGRRS+ VALLVFS LLSLR HTVSSTLPLQS   LN  +     STPKQDWNNAHE+HCSRERSRAAWK+IEEYL+PFVEKKK+EISTKCRLHPDNDMF
Subjt:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF

Query:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI
        RDQEQHKSHLDFNDWKCGYCRKRFYEEKY+DQHFDNRHYNLLN SR+RCLADLCGALHCDHVID VSQKSKCNPAAAARNKHM            L  + 
Subjt:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI

Query:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        F V  G L S HL                  +EFFLRQFCDAHTCSGKPKPFSRGRQ RTS FYIVISVLT+LFV+FFYVF YLY R
Subjt:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR

XP_022154197.1 uncharacterized protein LOC111021515 [Momordica charantia]

1.0e-105

70.45

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Query:  ITSTMGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPD
        +T+TMGRRS+WVALLV   LL +R H VSSTLPLQ LIQ +  +  L  STPKQD+NNAHE+HCSRERSR AWKIIEEYL+PFV K+K++IST CRLHPD
Subjt:  ITSTMGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPD

Query:  NDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVL
        NDMFRDQEQHKSHLDFN+WKCGYCRKRFYEEKYLDQHFDNRHY+LLN SR +CLAD+CGALHCD V++TVSQKSKCNPAAAAR KHM           VL
Subjt:  NDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVL

Query:  WPAIFTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR
          + F VA G   + HL                  +EFFLRQFCDAHTCSGKPKPFS+G++ RTS FYIVIS+LTVLFVLFFYVFIYLYKR
Subjt:  WPAIFTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR

XP_038891552.1 uncharacterized protein LOC120080934 [Benincasa hispida]

2.6e-112

75.96

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Query:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF
        MGRRSVWVALLVF  LLSLR HTVSS LPLQ+L Q   +      STPKQDWNNAHE+HCSRERSRAAWKIIEEYL+PFVEKKK++IS+KCRLHPDNDMF
Subjt:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF

Query:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI
        RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLN SRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHM            L  + 
Subjt:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI

Query:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        F V  G   + HL                  +EFFLRQFCDAHTCSGKPKPFSRGRQ R + FYIVISVLTVLFVLFFYVFIYLYKR
Subjt:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L8D2 C2H2-type domain-containing protein

4.0e-111

74.22

Show/hide

Query:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF
        MGRRS+ VALL+FS LLSLR HTVSSTLPLQSL Q +        STPKQDWNNAHE+HCSRERSRAAWK+IEEYL+PFVEKKK++ISTKCRLHPDNDMF
Subjt:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF

Query:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI
        RDQEQHKSHLDFNDWKCGYCRKRFYEEKY+DQHFDNRHYNLLN SR+RCLADLCGALHCDHVID VSQKSKCNPAAAARNKHM            L  + 
Subjt:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI

Query:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        F V  G L S HL                  +EFFL QFCDAHTCSGKPKPFSRGRQ R S FYIVISVLT+LFV+FFYVF YLY R
Subjt:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR

A0A1S3BMS8 uncharacterized protein LOC103491758

9.5e-113

75.61

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Query:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF
        MGRRS+ VALLVFS LLSLR HTVSSTLPLQS   LN  +     STPKQDWNNAHE+HCSRERSRAAWK+IEEYL+PFVEKKK+EISTKCRLHPDNDMF
Subjt:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF

Query:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI
        RDQEQHKSHLDFNDWKCGYCRKRFYEEKY+DQHFDNRHYNLLN SR+RCLADLCGALHCDHVID VSQKSKCNPAAAARNKHM            L  + 
Subjt:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI

Query:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        F V  G L S HL                  +EFFLRQFCDAHTCSGKPKPFSRGRQ RTS FYIVISVLT+LFV+FFYVF YLY R
Subjt:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR

A0A5A7URM7 Zinc finger family protein

5.6e-113

75.61

Show/hide

Query:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF
        MGRRS+ VALLVFS LLSLR HTVSSTLPLQSL Q +        STPKQDWNNAHE+HCSRERSRAAWK+IEEYL+PFVEKKK+EISTKCRLHPDNDMF
Subjt:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF

Query:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI
        RDQEQHKSHLDFNDWKCGYCRKRFYEEKY+DQHFDNRHYNLLN SR+RCLADLCGALHCDHVID VSQKSKCNPAAAARNKHM            L  + 
Subjt:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI

Query:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        F V  G L S HL                  +EFFLRQFCDAHTCSGKPKPFSRGRQ RTS FYIVISVLT+LFV+FFYVF YLY R
Subjt:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR

A0A6J1DL16 uncharacterized protein LOC111021515

5.1e-106

70.45

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Query:  ITSTMGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPD
        +T+TMGRRS+WVALLV   LL +R H VSSTLPLQ LIQ +  +  L  STPKQD+NNAHE+HCSRERSR AWKIIEEYL+PFV K+K++IST CRLHPD
Subjt:  ITSTMGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPD

Query:  NDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVL
        NDMFRDQEQHKSHLDFN+WKCGYCRKRFYEEKYLDQHFDNRHY+LLN SR +CLAD+CGALHCD V++TVSQKSKCNPAAAAR KHM           VL
Subjt:  NDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVL

Query:  WPAIFTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR
          + F VA G   + HL                  +EFFLRQFCDAHTCSGKPKPFS+G++ RTS FYIVIS+LTVLFVLFFYVFIYLYKR
Subjt:  WPAIFTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR

A0A6J1F459 uncharacterized protein LOC111441996

3.3e-105

71.08

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Query:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF
        MGRRS+WVALLV S LL  R H VSSTLPLQSL Q +        STPKQD NNAHE+HCSRERSRAAWKIIEEYL+PF++KK++++STKCRLHPDNDMF
Subjt:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF

Query:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI
        RDQEQHKSHLDFNDWKCGYC+K+FYEEKYLDQHF NRHY+LLN SRS+CLAD CGALHCD VIDT+SQKSKCNPAAAARNKHM            L  + 
Subjt:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI

Query:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        F +  G   + HL                  +EFFLRQFCDAHTCSGKPKPFSRGRQ RTS FYIVISVLTV+FVLFFYVFIYLYKR
Subjt:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G40710.1 zinc finger (C2H2 type) family protein

8.6e-66

47.55

Show/hide

Query:  IQLNFWALELMFSTPKQDW-------NNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYE
        I   FW   L  S  +Q+        +  HEIHCSRERSR AWKII+EYL+P+VEK+++++ + CR+H DND++R+QE+HK   D N+W+CG+C+K FYE
Subjt:  IQLNFWALELMFSTPKQDW-------NNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYE

Query:  EKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMV--LLTAVFPSMRVLWPAIFTVASGFLHSPHLTTLTTSIIYLM
        EKYLD+HFD+RHYNLLNAS  +CL+DLCGALHCD V+DT   KSKCNPAAAA+N+H+   L  + FP  +         ++  LH               
Subjt:  EKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMV--LLTAVFPSMRVLWPAIFTVASGFLHSPHLTTLTTSIIYLM

Query:  KHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKRYL
                +FFLRQFCDAHTCSG  KP S+ +  + S  YI+ S++ ++ +L +Y F+YL++R L
Subjt:  KHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKRYL

AT5G63280.1 C2H2-like zinc finger protein

8.6e-66

46.34

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Query:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF
        MGR  +W +L V   LL L LH        QS+ Q    +        + + +NA EIHCSRERSRAAW+II++YL PFVE++++EI   CRLHPDND++
Subjt:  MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMF

Query:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI
        RDQE HK H+D  +WKCGYC+K F +EK+LD+HF  RHYNLLN + ++CLADLCGALHCD V+ +   KSKCNP A A+N+H+    A          + 
Subjt:  RDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAI

Query:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        F V+ G    P  + L               +E FLRQFCDAHTC+G  KPF RG + ++  FY+ IS+LT++ +  FY+ ++L++R
Subjt:  FTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGTAAGAATCGGTTGCGTTCAGTTCCGCTCGACGCTCGTGGAGGTTCCATTACATCGACGATGGGAAGGCGATCCGTATGGGTTGCACTTCTCGTCTTTTCTTTTCT
TCTTTCTTTGCGACTACACACAGTTTCTTCCACTCTTCCTCTTCAATCATTGATTCAGTTAAATTTTTGGGCTTTGGAGTTGATGTTCAGTACTCCGAAGCAGGATTGGA
ACAATGCTCATGAGATACATTGCTCGAGAGAAAGGAGTAGGGCGGCGTGGAAAATAATTGAGGAGTATCTAATACCCTTTGTGGAAAAAAAGAAATTCGAGATTTCTACT
AAGTGTAGGCTTCACCCTGATAATGACATGTTCAGAGATCAAGAACAGCACAAGAGCCATCTAGATTTTAATGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGA
AGAGAAGTATCTCGATCAGCACTTTGACAATAGACACTATAATTTGCTCAATGCGAGTCGAAGCAGGTGCTTGGCAGATCTTTGTGGTGCATTGCACTGTGACCATGTGA
TAGATACAGTATCACAGAAAAGTAAATGCAATCCTGCTGCTGCTGCGAGAAATAAACATATGGTCTTGCTGACAGCTGTTTTCCCGTCGATGAGGGTGCTTTGGCCAGCC
ATCTTCACGGTAGCTTCAGGATTTCTCCACTCTCCTCATTTAACAACTTTAACTACTTCCATCATTTATCTAATGAAACACTTTTGGTGTAATTCAAATGAATTCTTCTT
GCGCCAGTTCTGTGATGCACACACATGTAGCGGAAAGCCAAAACCTTTCTCCAGAGGTCGACAGGCTAGGACGAGTGCGTTCTACATTGTGATTTCAGTTTTGACAGTCC
TTTTCGTGCTGTTTTTCTATGTCTTCATTTACTTGTATAAGAGGTATCTTTCCTTCGCCTACCTTCATTTGTATGATCATAAGATCTTGAACTTTGGTTTGACGGTCGGG
TTCGTCTTACAGGGGAATGAGAACTCGACCACAGGTGCTGAAGCGTCTCTCACAAAGTGGAAGAAAGAAAAAACCTTCATAGATAGAACCTTTTTGCCCTTTCAATAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MSKNRLRSVPLDARGGSITSTMGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEIST
KCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPA
IFTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKRYLSFAYLHLYDHKILNFGLTVG
FVLQGNENSTTGAEASLTKWKKEKTFIDRTFLPFQ

Lsi05G004840 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome