; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G004860 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G004860
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGBBH-like_N domain-containing protein
Genome locationchr05:6161463..6166263
RNA-Seq ExpressionLsi05G004860
SyntenyLsi05G004860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450051.1 PREDICTED: uncharacterized protein LOC103491759 isoform X1 [Cucumis melo]7.3e-1147.06Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS
        ML L R+FRTIHTT++APQ+TTFALHAPKY   E+           KF      D  +F +  E  ++ I S    +   K  S+G +         VI 
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS

Query:  GRRHVGIMSAEPVGNYGVR
        GRRHVGIMSAEPVGNYGVR
Subjt:  GRRHVGIMSAEPVGNYGVR

XP_022935010.1 uncharacterized protein LOC111442002 isoform X1 [Cucurbita moschata]1.9e-1147.9Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS
        MLAL+R FRTIHTT+DAPQVT+FAL APKY   E+           KF      D  +F +  E  ++ + S    +   K  S+G +         VIS
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS

Query:  GRRHVGIMSAEPVGNYGVR
        GRRHVGIMSAEPVGNYGVR
Subjt:  GRRHVGIMSAEPVGNYGVR

XP_022984013.1 uncharacterized protein LOC111482460 isoform X1 [Cucurbita maxima]7.3e-1146.22Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS
        MLAL R FRTIHTT+D+PQ+T+FAL APKY   E+           KF      D  +F +  E  ++ + S    +   K  S+G +         VIS
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS

Query:  GRRHVGIMSAEPVGNYGVR
        GRRHVGIMSAEPVGNYGVR
Subjt:  GRRHVGIMSAEPVGNYGVR

XP_031737737.1 uncharacterized protein LOC101219823 isoform X1 [Cucumis sativus]6.6e-1247.9Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS
        ML L R+FRTIHTT+DAPQ+TTFALHAPKY   E+           KF      D  +F +  E  ++ + S    +   K  S+G +         VIS
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS

Query:  GRRHVGIMSAEPVGNYGVR
        GRRHVGIMSAEPVGNYGVR
Subjt:  GRRHVGIMSAEPVGNYGVR

XP_038891561.1 uncharacterized protein LOC120080945 isoform X1 [Benincasa hispida]2.5e-1148.74Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS
        MLAL+RVFRTIHTTIDAPQ+TTFAL APKY   E+           KF      D  +F +  E  ++ + S    +   K  S+G +         VIS
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS

Query:  GRRHVGIMSAEPVGNYGVR
        GRRHV IMSAEPVGNYGVR
Subjt:  GRRHVGIMSAEPVGNYGVR

TrEMBL top hitse value%identityAlignment
A0A1S3BNF3 uncharacterized protein LOC103491759 isoform X13.5e-1147.06Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS
        ML L R+FRTIHTT++APQ+TTFALHAPKY   E+           KF      D  +F +  E  ++ I S    +   K  S+G +         VI 
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS

Query:  GRRHVGIMSAEPVGNYGVR
        GRRHVGIMSAEPVGNYGVR
Subjt:  GRRHVGIMSAEPVGNYGVR

A0A6J1F4E2 uncharacterized protein LOC111442002 isoform X21.0e-1047.01Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS
        MLAL+R FRTIHTT+DAPQVT+FAL APKY   E+           KF      D  +F +  E  ++ + S    +   K  S+G +         VIS
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS

Query:  GRRHVGIMSAEPVGNYG
        GRRHVGIMSAEPVGNYG
Subjt:  GRRHVGIMSAEPVGNYG

A0A6J1F9C8 uncharacterized protein LOC111442002 isoform X19.3e-1247.9Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS
        MLAL+R FRTIHTT+DAPQVT+FAL APKY   E+           KF      D  +F +  E  ++ + S    +   K  S+G +         VIS
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS

Query:  GRRHVGIMSAEPVGNYGVR
        GRRHVGIMSAEPVGNYGVR
Subjt:  GRRHVGIMSAEPVGNYGVR

A0A6J1J985 uncharacterized protein LOC111482460 isoform X23.9e-1045.3Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS
        MLAL R FRTIHTT+D+PQ+T+FAL APKY   E+           KF      D  +F +  E  ++ + S    +   K  S+G +         VIS
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS

Query:  GRRHVGIMSAEPVGNYG
        GRRHVGIMSAEPVGNYG
Subjt:  GRRHVGIMSAEPVGNYG

A0A6J1J9C4 uncharacterized protein LOC111482460 isoform X13.5e-1146.22Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS
        MLAL R FRTIHTT+D+PQ+T+FAL APKY   E+           KF      D  +F +  E  ++ + S    +   K  S+G +         VIS
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVIS

Query:  GRRHVGIMSAEPVGNYGVR
        GRRHVGIMSAEPVGNYGVR
Subjt:  GRRHVGIMSAEPVGNYGVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G27340.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).3.7e-0595.45Show/hide
Query:  VISGRRHVGIMSAEPVGNYGVR
        VISGRR+VGIMSAEPVGNYGVR
Subjt:  VISGRRHVGIMSAEPVGNYGVR

AT3G27340.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 693 Blast hits to 693 proteins in 282 species: Archae - 0; Bacteria - 530; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).2.2e-0591.67Show/hide
Query:  VISGRRHVGIMSAEPVGNYGVRDQ
        VISGRR+VGIMSAEPVGNYGVR Q
Subjt:  VISGRRHVGIMSAEPVGNYGVRDQ

AT3G27340.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 945 Blast hits to 945 proteins in 390 species: Archae - 0; Bacteria - 710; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink).3.7e-0595.45Show/hide
Query:  VISGRRHVGIMSAEPVGNYGVR
        VISGRR+VGIMSAEPVGNYGVR
Subjt:  VISGRRHVGIMSAEPVGNYGVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGCTTTGCGTAGAGTTTTCCGGACGATCCATACCACCATCGATGCTCCTCAAGTTACCACTTTCGCTCTTCACGCCCCCAAATATCAACTAGGAGAGATATTAAT
CCATGGAGATCTTCTTTCCAGCTTGTCGAAGTTTCGAAATAGCCTCCCAATGGATGCTGAAATCTTTGTGGTTTTGATGGAGCTGGGGTGGGTGGGTATAGCTAGTTGGG
TTTGGGCGAGTGGTCAAGGGAAGGGCACTTCTTTGGGCGTGCAAATGTGTTCGAACTCCACTAGATTTGTGGTAATTTCTGGACGACGTCATGTCGGTATCATGTCTGCC
GAACCAGTTGGGAACTATGGGGTAAGGGACCAGGGAGATAAAAGAAGACAAGTTGTCTCAGCACTGGCTGATGAAAAAGTTTCAATCGTTGCTGTGAAGCAAGAACCTGA
GCGTGGAAATAGACATGTTGCTGTAGCTCCTTGCAAGATTATCTAA
mRNA sequenceShow/hide mRNA sequence
TTATATCTTACTTAATTTTTCTTTTTACAAAATTTAATCTTTTTTAAAATTTAAAAATAAGATAAATAACTCGATACCTATTTGGATAATTGGTAAATTTATTTGAAAGT
TTGGAAATTCATATTAGTGTGGAAATAGAAATTCGCTAAAGATTTTGAAAAATATTGAGAGTGCTATTTCTGACCATTTTCTTTCTGATTAATCGGCCATAGAAAACGGA
GGTGGAAGCAACAGCGACGGTAGAGGAAGGGAAGGAGTGCACATTCAGAGAAATCATGTTAGCTTTGCGTAGAGTTTTCCGGACGATCCATACCACCATCGATGCTCCTC
AAGTTACCACTTTCGCTCTTCACGCCCCCAAATATCAACTAGGAGAGATATTAATCCATGGAGATCTTCTTTCCAGCTTGTCGAAGTTTCGAAATAGCCTCCCAATGGAT
GCTGAAATCTTTGTGGTTTTGATGGAGCTGGGGTGGGTGGGTATAGCTAGTTGGGTTTGGGCGAGTGGTCAAGGGAAGGGCACTTCTTTGGGCGTGCAAATGTGTTCGAA
CTCCACTAGATTTGTGGTAATTTCTGGACGACGTCATGTCGGTATCATGTCTGCCGAACCAGTTGGGAACTATGGGGTAAGGGACCAGGGAGATAAAAGAAGACAAGTTG
TCTCAGCACTGGCTGATGAAAAAGTTTCAATCGTTGCTGTGAAGCAAGAACCTGAGCGTGGAAATAGACATGTTGCTGTAGCTCCTTGCAAGATTATCTAA
Protein sequenceShow/hide protein sequence
MLALRRVFRTIHTTIDAPQVTTFALHAPKYQLGEILIHGDLLSSLSKFRNSLPMDAEIFVVLMELGWVGIASWVWASGQGKGTSLGVQMCSNSTRFVVISGRRHVGIMSA
EPVGNYGVRDQGDKRRQVVSALADEKVSIVAVKQEPERGNRHVAVAPCKII