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Lsi05G005050 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G005050
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationchr05:6340681..6343432
RNA-Seq ExpressionLsi05G005050
SyntenyLsi05G005050
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596757.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]4.7e-2987.5Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCCIRPP
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKK+GGQPESPG  P+AK  ADP KPQAKKWFCCI+ P
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCCIRPP

XP_004148258.1 protein NOI4 [Cucumis sativus]1.0e-3190.79Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCCIR-PPTES
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK P+AK+ ADPGKPQAKKWFCCI+ PPT+S
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCCIR-PPTES

XP_008449047.1 PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]3.5e-3292.11Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCCIR-PPTES
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK PQAK+ ADPGKPQAKKWFCCI+ PPT+S
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCCIR-PPTES

XP_022950564.1 RPM1-interacting protein 4-like [Cucurbita moschata]4.7e-2987.5Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCCIRPP
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKK+GGQPESPG  P+AK  ADP KPQAKKWFCCI+ P
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCCIRPP

XP_038905925.1 protein NOI4-like [Benincasa hispida]1.5e-3597.33Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCCIRPPTES
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK PQAKH ADPGKPQAKKWFCCIRPPTES
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCCIRPPTES

TrEMBL top hitse value%identityAlignment
A0A0A0L7F7 AvrRpt-cleavage domain-containing protein4.9e-3290.79Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCCIR-PPTES
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK P+AK+ ADPGKPQAKKWFCCI+ PPT+S
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCCIR-PPTES

A0A1S3BL66 RPM1-interacting protein 4-like1.7e-3292.11Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCCIR-PPTES
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK PQAK+ ADPGKPQAKKWFCCI+ PPT+S
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCCIR-PPTES

A0A5E4EUE3 PREDICTED: RPM1-interacting 42.1e-2779.22Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK-PPQAKHGADPGKPQAKKWFCCI-RPPTES
        MSEKG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+PESPGK  P  +HG +PG+P +KKWFCCI +PP ES
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK-PPQAKHGADPGKPQAKKWFCCI-RPPTES

A0A6J1GG65 RPM1-interacting protein 4-like2.3e-2987.5Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCCIRPP
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKK+GGQPESPG  P+AK  ADP KPQAKKWFCCI+ P
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCCIRPP

M5WH67 AvrRpt-cleavage domain-containing protein2.1e-2779.22Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK-PPQAKHGADPGKPQAKKWFCCI-RPPTES
        MSEKG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+PESPGK  P  +HG +PG+P +KKWFCCI +PP ES
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK-PPQAKHGADPGKPQAKKWFCCI-RPPTES

SwissProt top hitse value%identityAlignment
O22633 Protein NOI41.9e-2572Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQA---KHGADPGKPQAKKWFCCIRPP
        MS+KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SPGK  +      G DP KPQ KKW CC++ P
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQA---KHGADPGKPQAKKWFCCIRPP

Q8GYN5 RPM1-interacting protein 44.0e-0739.39Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCC
        EK   +PKFG+WD NNP+SA+G+T IFNK R+E+ +G       + P  +   +P    +    CC
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCC

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein2.0e-2270.83Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK--PPQAKHGADPGKPQAKKWFCCIR
        M++KG+PLPKFGEWDVN+P+SAEGFTVIFNKAR+EKK GG+ +SPGK  P   K+G    KP AKKWFCCIR
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK--PPQAKHGADPGKPQAKKWFCCIR

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein3.0e-2173.13Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQA---KHGADPGKPQAKK
        MS+KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SPGK  +      G DP KPQ  K
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQA---KHGADPGKPQAKK

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein4.3e-2072.31Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQA---KHGADPGKPQAKK
        +KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SPGK  +      G DP KPQ  K
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQA---KHGADPGKPQAKK

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein2.0e-2571.23Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQA---KHGADPGKPQAKKWFCCIRPP
        +KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SPGK  +      G DP KPQ KKW CC++ P
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQA---KHGADPGKPQAKKWFCCIRPP

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein2.1e-1460Show/hide
Query:  KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT----GGQPESPGKPPQAKHGADPG------KPQAK-KWFC
        KG+PLPKFGEWDVNNPASAEGFTVIF+KA DEKKT    G  P S    PQ    +D         P+AK KWFC
Subjt:  KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT----GGQPESPGKPPQAKHGADPG------KPQAK-KWFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAGAAGGGTCAGCCACTACCGAAGTTTGGGGAATGGGATGTTAATAATCCTGCTTCTGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGAGATGAGAAGAA
GACCGGTGGCCAACCCGAATCACCTGGAAAGCCACCTCAGGCGAAACATGGAGCAGATCCTGGCAAACCTCAGGCTAAGAAATGGTTCTGCTGCATACGCCCACCTACAG
AATCTTGA
mRNA sequenceShow/hide mRNA sequence
GACGAAATAAAAAGGCGCTGTCCGTTGTGTAATAAGCACGATTTGGCCGAAACAAAACTTTCTTCTTCTTCTTGTCTCTCTCGCTCGCTCCTCTCCTGCGTCTGGTGTGG
CCATCCTCTTTCTTCCCTTCTTCGATTCTTCGTTTACTGGCAAACTAACTTTCTCGAATTCAATGTCGGAGAAGGGTCAGCCACTACCGAAGTTTGGGGAATGGGATGTT
AATAATCCTGCTTCTGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGAGATGAGAAGAAGACCGGTGGCCAACCCGAATCACCTGGAAAGCCACCTCAGGCGAAACA
TGGAGCAGATCCTGGCAAACCTCAGGCTAAGAAATGGTTCTGCTGCATACGCCCACCTACAGAATCTTGATGGTATTACCTTTCTGTAGATAACCACCGTATTGCGCTAA
GATCGTCTCCGCTGCTTTTCGATAGAAAATGAGATTTTTAAAGCTGTGATCAGCCTGCTACAGTATTTGCTTCATAGTCTGAGTCATGGAGGAAAAAAGTAGAAGAATTT
TACCTTCTTTATTTGTGGTGCTGATGTGGTGAATTGTCAGTAGAAGCTGAGCTATGCTATCTCATTTCTCTGCTCCCTTTTTTGTCCCTTTTTTTGTTGTCTTTTTTAAT
GCATTTTGCTCTTTATATCTGATATTGAATCTCTATTATTGTTTGTGAAATTGTTTCTCTCTTTTTATTTTCATTTTCCTCTGTAGATGATTTTTTGCTACTCCAAAACA
CCTTTGGGCGCCCCCCCCCC
Protein sequenceShow/hide protein sequence
MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAKKWFCCIRPPTES