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Lsi05G005120 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G005120
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionouter envelope protein 80, chloroplastic-like
Genome locationchr05:6414022..6415837
RNA-Seq ExpressionLsi05G005120
SyntenyLsi05G005120
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0045040 - protein insertion into mitochondrial outer membrane (biological process)
GO:0001401 - SAM complex (cellular component)
GO:0009527 - plastid outer membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000184 - Bacterial surface antigen (D15)
IPR039910 - Surface antigen D15-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8528103.1 hypothetical protein F0562_035028 [Nyssa sinensis]9.0e-0872.09Show/hide
Query:  LANSAHIEATVIGGTNSVRGYKEGVIGSGQSYVVGCGEISFPL
        + N +  EA  IGGTNSVRGY+EG +GSG+SYVVGCGEISFPL
Subjt:  LANSAHIEATVIGGTNSVRGYKEGVIGSGQSYVVGCGEISFPL

XP_022155206.1 zinc finger protein WIP6 [Momordica charantia]1.4e-0864.29Show/hide
Query:  TIAMHIGPPLSAP------AVHPVDAHYWITTSAQILVSSTQFSYFVCTKTFNRYN
        T+AMHIGPPL+A       A  PVD  YWI T AQILV  TQFS  VC+KTFNRYN
Subjt:  TIAMHIGPPLSAP------AVHPVDAHYWITTSAQILVSSTQFSYFVCTKTFNRYN

XP_023546764.1 zinc finger protein WIP6-like isoform X1 [Cucurbita pepo subsp. pepo]9.0e-0860.34Show/hide
Query:  TIAMHIGPPLSA--------PAVHPVDAHYWITTSAQILVSSTQFSYFVCTKTFNRYN
        T+AMHIGPP +A         A  PVD  YWI T AQILV  TQFS  VC+KTFNRYN
Subjt:  TIAMHIGPPLSA--------PAVHPVDAHYWITTSAQILVSSTQFSYFVCTKTFNRYN

XP_024159864.1 outer envelope protein 80, chloroplastic [Rosa chinensis]9.0e-0862.5Show/hide
Query:  VFSVSKYWKDAFALANSAHIEATVIGGTNSVRGYKEGVIGSGQSYVVGCGEISFPL
        +FSVS        + N    EA VIGGTNSVRGY+EG +GSG+SY VGCGEISFPL
Subjt:  VFSVSKYWKDAFALANSAHIEATVIGGTNSVRGYKEGVIGSGQSYVVGCGEISFPL

XP_038875923.1 zinc finger protein WIP6-like [Benincasa hispida]2.1e-0969.64Show/hide
Query:  TIAMHIGPP-----LSAPAVHPVD-AHYWITTSAQILVSSTQFSYFVCTKTFNRYN
        T+AMHIGPP      S PAV P+D AHYWI T AQILV  TQFS  VCTKTFNRYN
Subjt:  TIAMHIGPP-----LSAPAVHPVD-AHYWITTSAQILVSSTQFSYFVCTKTFNRYN

TrEMBL top hitse value%identityAlignment
A0A2P6QLX7 Putative bacterial surface antigen (D15)4.3e-0862.5Show/hide
Query:  VFSVSKYWKDAFALANSAHIEATVIGGTNSVRGYKEGVIGSGQSYVVGCGEISFPL
        +FSVS        + N    EA VIGGTNSVRGY+EG +GSG+SY VGCGEISFPL
Subjt:  VFSVSKYWKDAFALANSAHIEATVIGGTNSVRGYKEGVIGSGQSYVVGCGEISFPL

A0A5B7AVS1 POTRA domain-containing protein4.3e-0872.09Show/hide
Query:  LANSAHIEATVIGGTNSVRGYKEGVIGSGQSYVVGCGEISFPL
        + N +  EA  IGGTNSVRGY+EG +GSG+SYVVGCGEISFPL
Subjt:  LANSAHIEATVIGGTNSVRGYKEGVIGSGQSYVVGCGEISFPL

A0A5B7AWA5 POTRA domain-containing protein4.3e-0872.09Show/hide
Query:  LANSAHIEATVIGGTNSVRGYKEGVIGSGQSYVVGCGEISFPL
        + N +  EA  IGGTNSVRGY+EG +GSG+SYVVGCGEISFPL
Subjt:  LANSAHIEATVIGGTNSVRGYKEGVIGSGQSYVVGCGEISFPL

A0A6J1DR05 zinc finger protein WIP66.7e-0964.29Show/hide
Query:  TIAMHIGPPLSAP------AVHPVDAHYWITTSAQILVSSTQFSYFVCTKTFNRYN
        T+AMHIGPPL+A       A  PVD  YWI T AQILV  TQFS  VC+KTFNRYN
Subjt:  TIAMHIGPPLSAP------AVHPVDAHYWITTSAQILVSSTQFSYFVCTKTFNRYN

A0A6J1I950 zinc finger protein WIP6-like4.3e-0860.34Show/hide
Query:  TIAMHIGPPLSA--------PAVHPVDAHYWITTSAQILVSSTQFSYFVCTKTFNRYN
        T+AMHIGPP +A         A  PVD  YWI T AQILV  TQFS  VC+KTFNRYN
Subjt:  TIAMHIGPPLSA--------PAVHPVDAHYWITTSAQILVSSTQFSYFVCTKTFNRYN

SwissProt top hitse value%identityAlignment
A2X208 Outer envelope protein 80, chloroplastic1.0e-0672.73Show/hide
Query:  EATVIGGTNSVRGYKEGVIGSGQSYVVGCGEIS
        EA  IGGTNSVRGY+EG +GSG+SY VG GE+S
Subjt:  EATVIGGTNSVRGYKEGVIGSGQSYVVGCGEIS

Q6H7M7 Outer envelope protein 80, chloroplastic1.0e-0672.73Show/hide
Query:  EATVIGGTNSVRGYKEGVIGSGQSYVVGCGEIS
        EA  IGGTNSVRGY+EG +GSG+SY VG GE+S
Subjt:  EATVIGGTNSVRGYKEGVIGSGQSYVVGCGEIS

Q9C5J8 Outer envelope protein 80, chloroplastic2.9e-0977.78Show/hide
Query:  EATVIGGTNSVRGYKEGVIGSGQSYVVGCGEISFPL
        EA VIGGTNSVRGY+EG +GSG+SYVVG GE+SFP+
Subjt:  EATVIGGTNSVRGYKEGVIGSGQSYVVGCGEISFPL

Q9FX68 Zinc finger protein WIP63.3e-0545Show/hide
Query:  TIAMHIGPPLS----------APAVHPVDAHYWITTSAQILVSSTQFSYFVCTKTFNRYN
        T+A+HIGPP S             +      YWI + +QILV  TQFS  VC KTFNR+N
Subjt:  TIAMHIGPPLS----------APAVHPVDAHYWITTSAQILVSSTQFSYFVCTKTFNRYN

Arabidopsis top hitse value%identityAlignment
AT1G13290.1 C2H2-like zinc finger protein2.4e-0645Show/hide
Query:  TIAMHIGPPLS----------APAVHPVDAHYWITTSAQILVSSTQFSYFVCTKTFNRYN
        T+A+HIGPP S             +      YWI + +QILV  TQFS  VC KTFNR+N
Subjt:  TIAMHIGPPLS----------APAVHPVDAHYWITTSAQILVSSTQFSYFVCTKTFNRYN

AT1G51220.1 WIP domain protein 57.6e-0563.33Show/hide
Query:  HYWITTSAQILVSSTQFSYFVCTKTFNRYN
        HYWI T +QIL+  TQF+  +C KTFNRYN
Subjt:  HYWITTSAQILVSSTQFSYFVCTKTFNRYN

AT3G20880.1 WIP domain protein 41.7e-0463.33Show/hide
Query:  HYWITTSAQILVSSTQFSYFVCTKTFNRYN
        H+WI T +QIL+  TQFS  +C KTFNRYN
Subjt:  HYWITTSAQILVSSTQFSYFVCTKTFNRYN

AT3G57670.1 C2H2-type zinc finger family protein1.3e-0468.97Show/hide
Query:  YWITTSAQILVSSTQFSYFVCTKTFNRYN
        YWI T +QIL+  TQFS  VC KTFNRYN
Subjt:  YWITTSAQILVSSTQFSYFVCTKTFNRYN

AT5G19620.1 outer envelope protein of 80 kDa2.1e-1077.78Show/hide
Query:  EATVIGGTNSVRGYKEGVIGSGQSYVVGCGEISFPL
        EA VIGGTNSVRGY+EG +GSG+SYVVG GE+SFP+
Subjt:  EATVIGGTNSVRGYKEGVIGSGQSYVVGCGEISFPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTTGGACACCATCGCAATGCACATTGGTCCTCCCCTCTCTGCCCCCGCCGTCCACCCGGTTGACGCCCACTACTGGATCACTACGTCCGCCCAAATTCTCGTTAG
TTCCACTCAGTTCTCTTACTTCGTCTGCACTAAAACCTTCAACAGATACAACATGCAGGTCTTCAGTGTTTCTAAATATTGGAAGGATGCCTTCGCCTTGGCAAATTCTG
CCCACATTGAAGCAACTGTCATTGGGGGAACAAACAGTGTAAGAGGATACAAAGAAGGTGTTATAGGCTCTGGTCAATCTTATGTTGTTGGATGTGGAGAGATCTCTTTT
CCCTTG
mRNA sequenceShow/hide mRNA sequence
CTTCTCTCTAAACCAAAGGAGTATTTCTCTTCGCCTTCTCTCGTGTCTGTCTAGATTTACAGATCTCTAGTGTAGAGGGTGATGAAAGAAGGAGAATAATCCATTTTTCC
AAACAACCCATGTACCCTAATTCTTCTCTTCAAAATCCTAATCATCAAAATGCTGTTGGACACCATCGCAATGCACATTGGTCCTCCCCTCTCTGCCCCCGCCGTCCACC
CGGTTGACGCCCACTACTGGATCACTACGTCCGCCCAAATTCTCGTTAGTTCCACTCAGTTCTCTTACTTCGTCTGCACTAAAACCTTCAACAGATACAACATGCAGGTC
TTCAGTGTTTCTAAATATTGGAAGGATGCCTTCGCCTTGGCAAATTCTGCCCACATTGAAGCAACTGTCATTGGGGGAACAAACAGTGTAAGAGGATACAAAGAAGGTGT
TATAGGCTCTGGTCAATCTTATGTTGTTGGATGTGGAGAGATCTCTTTTCCCTTG
Protein sequenceShow/hide protein sequence
MLLDTIAMHIGPPLSAPAVHPVDAHYWITTSAQILVSSTQFSYFVCTKTFNRYNMQVFSVSKYWKDAFALANSAHIEATVIGGTNSVRGYKEGVIGSGQSYVVGCGEISF
PL