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Lsi05G005150 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G005150
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionserine-rich protein-related
Genome locationchr05:6463590..6465632
RNA-Seq ExpressionLsi05G005150
SyntenyLsi05G005150
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CDP13642.1 unnamed protein product [Coffea canephora]1.2e-2059.05Show/hide
Query:  SLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFT--TTDLRLFAATPER------------LDFTLGSA
        SLD  RLTYSLAL SPASK V PFCSGTC  TFSLWKLKKTNLP+NKD PVLKLITR   +SAFT    +L LF  T  +            +   L   
Subjt:  SLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFT--TTDLRLFAATPER------------LDFTLGSA

Query:  RRPWN
        RRPWN
Subjt:  RRPWN

KAF2325686.1 hypothetical protein GH714_033077 [Hevea brasiliensis]3.3e-2151.49Show/hide
Query:  SNLSDMARSLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFTT-TDLRLFAATPERLDFTLGSARRPWN
        S + +   S DF+RLTYSLA TSPASKWV PFCSGTC  TFSLWKLK TNLP+ +DSPVL+LITR   +SAF+    L L      R    L    RPWN
Subjt:  SNLSDMARSLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFTT-TDLRLFAATPERLDFTLGSARRPWN

Query:  DTVVGLGCCLVAVAEKVGAAKTAEEEAAAAIGGD
           V L  C   V  K         +A  AIGGD
Subjt:  DTVVGLGCCLVAVAEKVGAAKTAEEEAAAAIGGD

KAF2582459.1 hypothetical protein F2Q68_00006945 [Brassica cretica]1.7e-2254.03Show/hide
Query:  SLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFTTTDLRLFAATPERLDFTLGSA---------RRPWN
        S DFKRLTYSLA +SPASKWV PFCSGTCL TFSLWKLKKTN P+ ++ PVL+L+T DG +SA TT +       PE +D +LG A         RRPWN
Subjt:  SLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFTTTDLRLFAATPERLDFTLGSA---------RRPWN

Query:  DTVVGLGCCLVAVAEKVGAAKTAE
        +  +  GC    V EKV     A+
Subjt:  DTVVGLGCCLVAVAEKVGAAKTAE

KAF2606990.1 hypothetical protein F2Q68_00044506, partial [Brassica cretica]2.1e-2067.09Show/hide
Query:  SLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFTTTDLRLFAATPERL
        S DFKRLTYSLA +SPASKWV PFCSGTCL TFSLWKLKKTN P+ ++ PVL+LIT DG +SA TT +  L  A  + L
Subjt:  SLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFTTTDLRLFAATPERL

XP_022734315.1 uncharacterized protein LOC111287893 [Durio zibethinus]1.7e-2252.27Show/hide
Query:  SNLSDMARSLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFTTTDLRLFAATPERLDFTLGSAR--RPW
        S + +   SLD +RLTYSLA  SPASKWVNPFCSGTCL TFSLWKLK TNLPK ++ PVL+LIT    +SA T +    F      LD  L   R  RPW
Subjt:  SNLSDMARSLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFTTTDLRLFAATPERLDFTLGSAR--RPW

Query:  NDTVVGLG---CCLVAVAEKVGAAKTAEEEAA
        N+ V G+     CL  + E +G  K   EEAA
Subjt:  NDTVVGLG---CCLVAVAEKVGAAKTAEEEAA

TrEMBL top hitse value%identityAlignment
A0A061F477 Uncharacterized protein3.0e-2048.2Show/hide
Query:  SNLSDMARSLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFTTTDLRLFAATPERLD---FTLGSARRP
        S + +   SLD  RLTYSLAL SPASKWV PFCSGTC  TFSLWKLK TNLPK ++ PVL+LIT    +SA T      F A    L      L    RP
Subjt:  SNLSDMARSLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFTTTDLRLFAATPERLD---FTLGSARRP

Query:  WNDTVVGLGCCLVAVAEKVGAAKTAEEEAAAAIGGDNVV
        WN+ + G+      + EKVG  +   EEAAA +    V+
Subjt:  WNDTVVGLGCCLVAVAEKVGAAKTAEEEAAAAIGGDNVV

A0A068UZC0 Uncharacterized protein6.0e-2159.05Show/hide
Query:  SLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFT--TTDLRLFAATPER------------LDFTLGSA
        SLD  RLTYSLAL SPASK V PFCSGTC  TFSLWKLKKTNLP+NKD PVLKLITR   +SAFT    +L LF  T  +            +   L   
Subjt:  SLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFT--TTDLRLFAATPER------------LDFTLGSA

Query:  RRPWN
        RRPWN
Subjt:  RRPWN

A0A2P2J9Y0 Uncharacterized protein MANES_01G0064008.7e-2052.07Show/hide
Query:  SNLSDMARSLDFKRLTYSLALTSPASKWVNPFCSGT-CLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFTTTDLRLFAAT--PERLDFTLGSARRP
        S + +   S D +RLTYSLALTSPASKWV PFCSG  C  TFSLWKLKKTNLPK  D PVL+LIT+   +SA     L         E L   LG   RP
Subjt:  SNLSDMARSLDFKRLTYSLALTSPASKWVNPFCSGT-CLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFTTTDLRLFAAT--PERLDFTLGSARRP

Query:  WNDTVVG--LGCCLVAVAEKV
        WN+ + G  L  C   VA  V
Subjt:  WNDTVVG--LGCCLVAVAEKV

A0A6A6NKU2 Uncharacterized protein1.6e-2151.49Show/hide
Query:  SNLSDMARSLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFTT-TDLRLFAATPERLDFTLGSARRPWN
        S + +   S DF+RLTYSLA TSPASKWV PFCSGTC  TFSLWKLK TNLP+ +DSPVL+LITR   +SAF+    L L      R    L    RPWN
Subjt:  SNLSDMARSLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFTT-TDLRLFAATPERLDFTLGSARRPWN

Query:  DTVVGLGCCLVAVAEKVGAAKTAEEEAAAAIGGD
           V L  C   V  K         +A  AIGGD
Subjt:  DTVVGLGCCLVAVAEKVGAAKTAEEEAAAAIGGD

A0A6P5Y1P0 uncharacterized protein LOC1112878938.4e-2352.27Show/hide
Query:  SNLSDMARSLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFTTTDLRLFAATPERLDFTLGSAR--RPW
        S + +   SLD +RLTYSLA  SPASKWVNPFCSGTCL TFSLWKLK TNLPK ++ PVL+LIT    +SA T +    F      LD  L   R  RPW
Subjt:  SNLSDMARSLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLWKLKKTNLPKNKDSPVLKLITRDGFNSAFTTTDLRLFAATPERLDFTLGSAR--RPW

Query:  NDTVVGLG---CCLVAVAEKVGAAKTAEEEAA
        N+ V G+     CL  + E +G  K   EEAA
Subjt:  NDTVVGLG---CCLVAVAEKVGAAKTAEEEAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein4.1e-0654.05Show/hide
Query:  ITKSNCLCSPTTHIGSFRCRRHRTSAMTRGGSIGSNL
        ITK+ C+CSPTTH GSF+C+ HRT ++ R  S+ +N+
Subjt:  ITKSNCLCSPTTHIGSFRCRRHRTSAMTRGGSIGSNL

AT1G67910.1 unknown protein4.1e-0666.67Show/hide
Query:  ITKSNCLCSPTTHIGSFRCRRHRTSAMTRGGSI
        +TK+NCLCSPTTH GSFRCR HR+ ++ R  SI
Subjt:  ITKSNCLCSPTTHIGSFRCRRHRTSAMTRGGSI

AT1G67910.2 unknown protein4.1e-0666.67Show/hide
Query:  ITKSNCLCSPTTHIGSFRCRRHRTSAMTRGGSI
        +TK+NCLCSPTTH GSFRCR HR+ ++ R  SI
Subjt:  ITKSNCLCSPTTHIGSFRCRRHRTSAMTRGGSI

AT3G13227.1 serine-rich protein-related3.7e-0758.7Show/hide
Query:  SRITKSNCLCSPTTHIGSFRCRRHRTSA---MTRGGSIGSNLSDMA
        S   + NCLC+PTTH GSFRCR HR +A   M+RG S+ SNLS +A
Subjt:  SRITKSNCLCSPTTHIGSFRCRRHRTSA---MTRGGSIGSNLSDMA

AT5G55980.1 serine-rich protein-related3.6e-1053.57Show/hide
Query:  TPHLLLSPTALSRITKSNCLCSPTTHIGSFRCRRHRTSAMTRGGSIGSNLSDMARS
        +P L    ++  + T+ NCLCSPTTH GSFRCR HR  ++TR GSIGSNL+ +  S
Subjt:  TPHLLLSPTALSRITKSNCLCSPTTHIGSFRCRRHRTSAMTRGGSIGSNLSDMARS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCATTGCCGGAATACGACATGGAAGAGCTGAAGAAAACCCCACATTTGTTGCTGTCACCAACAGCCTTATCTCGCATCACAAAATCCAACTGTTTATGC
TCTCCCACCACTCATATTGGATCTTTTAGGTGCCGCCGTCACCGGACCTCCGCCATGACTCGTGGCGGCTCCATCGGCTCCAACCTCTCTGATATGGCTCGATCA
TTAGATTTCAAGAGGCTAACATATTCTTTAGCCCTCACATCACCAGCCTCAAAATGGGTCAACCCATTTTGCTCTGGCACTTGTTTGCTCACATTCTCCCTTTGG
AAATTGAAGAAAACAAACCTTCCTAAGAACAAGGACAGCCCTGTGCTCAAGCTTATCACTAGAGATGGGTTCAACTCCGCCTTCACCACCACCGATCTCCGGCTT
TTCGCTGCGACTCCTGAGCGGCTTGATTTCACGCTTGGGAGCGCGCGGAGGCCTTGGAATGATACGGTGGTGGGGCTCGGCTGCTGCCTTGTGGCGGTAGCCGAG
AAGGTCGGGGCGGCAAAGACGGCAGAGGAGGAGGCGGCGGCGGCCATTGGTGGTGATAATGTTGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCATTGCCGGAATACGACATGGAAGAGCTGAAGAAAACCCCACATTTGTTGCTGTCACCAACAGCCTTATCTCGCATCACAAAATCCAACTGTTTATGC
TCTCCCACCACTCATATTGGATCTTTTAGGTGCCGCCGTCACCGGACCTCCGCCATGACTCGTGGCGGCTCCATCGGCTCCAACCTCTCTGATATGGCTCGATCA
TTAGATTTCAAGAGGCTAACATATTCTTTAGCCCTCACATCACCAGCCTCAAAATGGGTCAACCCATTTTGCTCTGGCACTTGTTTGCTCACATTCTCCCTTTGG
AAATTGAAGAAAACAAACCTTCCTAAGAACAAGGACAGCCCTGTGCTCAAGCTTATCACTAGAGATGGGTTCAACTCCGCCTTCACCACCACCGATCTCCGGCTT
TTCGCTGCGACTCCTGAGCGGCTTGATTTCACGCTTGGGAGCGCGCGGAGGCCTTGGAATGATACGGTGGTGGGGCTCGGCTGCTGCCTTGTGGCGGTAGCCGAG
AAGGTCGGGGCGGCAAAGACGGCAGAGGAGGAGGCGGCGGCGGCCATTGGTGGTGATAATGTTGTGTAA
Protein sequenceShow/hide protein sequence
MGALPEYDMEELKKTPHLLLSPTALSRITKSNCLCSPTTHIGSFRCRRHRTSAMTRGGSIGSNLSDMARSLDFKRLTYSLALTSPASKWVNPFCSGTCLLTFSLW
KLKKTNLPKNKDSPVLKLITRDGFNSAFTTTDLRLFAATPERLDFTLGSARRPWNDTVVGLGCCLVAVAEKVGAAKTAEEEAAAAIGGDNVV