; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G005160 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G005160
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPSI-G
Genome locationchr05:6465134..6465610
RNA-Seq ExpressionLsi05G005160
SyntenyLsi05G005160
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000549 - Photosystem I PsaG/PsaK protein
IPR016370 - Photosystem I PsaG/PsaK, plant
IPR017494 - Photosystem I PsaG, plant
IPR023618 - Photosystem I PsaG/PsaK domain, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596752.1 Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.2e-6787.34Show/hide
Query:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
        MAAAASSSAVFAA +FS    RQQP+P+T+S+QGLR LP +KSSRS    KS+RSVVVKAELNPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
Subjt:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG

Query:  LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        +THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_004149569.1 photosystem I reaction center subunit V, chloroplastic [Cucumis sativus]2.3e-7395.57Show/hide
Query:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
        MAAAASSSAVFAAPTFSATATRQQP+PTT+SFQGLRALPSVKSSRS VA KSRRS+ VKAELNPSLVISLSTGLSLFLGRFVFFNFQRENV KQVPEQNG
Subjt:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG

Query:  LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_008449063.1 PREDICTED: photosystem I reaction center subunit V, chloroplastic [Cucumis melo]1.9e-7295.51Show/hide
Query:  AAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT
        AAASSSAVF APTFSATATRQQPSPTT+SFQGLRALPSVKSSRS VA K+RRS+ VKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT
Subjt:  AAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT

Query:  HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_022934047.1 photosystem I reaction center subunit V, chloroplastic-like [Cucurbita moschata]5.4e-6787.97Show/hide
Query:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
        MAAAASSSAVFAA +FSA+  RQQP+P+T+S+QGLR LP +KSSRS    KS RSVVVKAELNPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
Subjt:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG

Query:  LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        +THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_038903014.1 photosystem I reaction center subunit V, chloroplastic [Benincasa hispida]2.3e-7395.57Show/hide
Query:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
        MA AASSSA+FAAPTFSA ATRQQP+PT VSFQGLRALPSVKSSR GVA KSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
Subjt:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG

Query:  LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

TrEMBL top hitse value%identityAlignment
A0A0A0L4W3 PSI-G1.1e-7395.57Show/hide
Query:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
        MAAAASSSAVFAAPTFSATATRQQP+PTT+SFQGLRALPSVKSSRS VA KSRRS+ VKAELNPSLVISLSTGLSLFLGRFVFFNFQRENV KQVPEQNG
Subjt:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG

Query:  LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A1S3BKK6 PSI-G9.3e-7395.51Show/hide
Query:  AAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT
        AAASSSAVF APTFSATATRQQPSPTT+SFQGLRALPSVKSSRS VA K+RRS+ VKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT
Subjt:  AAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT

Query:  HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A5D3CPR0 PSI-G9.3e-7395.51Show/hide
Query:  AAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT
        AAASSSAVF APTFSATATRQQPSPTT+SFQGLRALPSVKSSRS VA K+RRS+ VKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT
Subjt:  AAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLT

Query:  HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A6J1F1K2 PSI-G2.6e-6787.97Show/hide
Query:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
        MAAAASSSAVFAA +FSA+  RQQP+P+T+S+QGLR LP +KSSRS    KS RSVVVKAELNPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
Subjt:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG

Query:  LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        +THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A6J1L2L3 PSI-G5.8e-6787.34Show/hide
Query:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
        MAA ASSSAVFAA +FSA   RQQP+P+T+S+QGLR LP +KSSRS  A KS RS+VVKAELNPS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
Subjt:  MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG

Query:  LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        +THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

SwissProt top hitse value%identityAlignment
P12357 Photosystem I reaction center subunit V, chloroplastic1.1e-4969.09Show/hide
Query:  AAAASSSAVFAAPTFSATATRQQPSP----TTVSFQGLRAL----PSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSK
        AA AS S+   AP  S     QQ          SF GLR L     S  SS S   + +RRS+  +AEL+PSLVISLSTGLSLFLGRFVFFNFQREN++K
Subjt:  AAAASSSAVFAAPTFSATATRQQPSP----TTVSFQGLRAL----PSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSK

Query:  QVPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        QVPEQNG++HFEAGD RAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+SNGYDP FF
Subjt:  QVPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

P14224 Photosystem I reaction center subunit V, chloroplastic3.2e-1440.16Show/hide
Query:  QGLRALPSVK-SSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENV---SKQVPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNI
        Q L + PS++ S+R       R +VV KA L+P +VIS ST   L +GRFVF  +QR      S   P+  G T+F+  D++     ++  +NDP GFNI
Subjt:  QGLRALPSVK-SSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENV---SKQVPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNI

Query:  VDVLAWGSIGHIVAYYILATSS
        +DV  WG++GH V + +LA +S
Subjt:  VDVLAWGSIGHIVAYYILATSS

Q00327 Photosystem I reaction center subunit V, chloroplastic2.0e-4871.33Show/hide
Query:  ATATRQQPSPTTVSFQGLRALPSVKSSRS--GVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYV
        AT+T    SP  V+  GLR  PS +++ S  GV+  +RRSV  +A L PS+VISLSTGLSL +GRFVFFNFQRENV+KQVPEQNG THFEAGD RAKE+ 
Subjt:  ATATRQQPSPTTVSFQGLRALPSVKSSRS--GVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVRAKEYV

Query:  SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
         +LKSNDPVGFN+VDVLAWGSIGHIVAYYILAT+SNGYDP FF
Subjt:  SLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

Q9S7N7 Photosystem I reaction center subunit V, chloroplastic1.1e-4968.75Show/hide
Query:  AASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSS----RSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ
        A S+SA+ +  TFS   + +  +P ++SF GLR L    SS    +     +   S VV+AEL+PS+VISLSTGLSLFLGRFVFFNFQRENV+KQ +PEQ
Subjt:  AASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSS----RSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ

Query:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NG THFEAGD RAKEYVSLLKSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Subjt:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

Q9SPM4 Photosystem I reaction center subunit V, chloroplastic1.5e-1951.61Show/hide
Query:  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYD
        N S +IS ST   L LGRFVF  FQR  VS+  +PEQNG+          + + S+LK+NDP GF +VDVLAWG++GH V ++ILAT++NGY+
Subjt:  NPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYD

Arabidopsis top hitse value%identityAlignment
AT1G55670.1 photosystem I subunit G7.6e-5168.75Show/hide
Query:  AASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSS----RSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ
        A S+SA+ +  TFS   + +  +P ++SF GLR L    SS    +     +   S VV+AEL+PS+VISLSTGLSLFLGRFVFFNFQRENV+KQ +PEQ
Subjt:  AASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSS----RSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ

Query:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NG THFEAGD RAKEYVSLLKSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Subjt:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCCGCCTCCTCCTCTGCCGTCTTTGCCGCCCCGACCTTCTCGGCTACCGCCACAAGGCAGCAGCCGAGCCCCACCACCGTATCATTCCAAGGCCTCCGCGC
GCTCCCAAGCGTGAAATCAAGCCGCTCAGGAGTCGCAGCGAAAAGCCGGAGATCGGTGGTGGTGAAGGCGGAGTTGAACCCATCTCTAGTGATAAGCTTGAGCACAGGGC
TGTCCTTGTTCTTAGGAAGGTTTGTTTTCTTCAATTTCCAAAGGGAGAATGTGAGCAAACAAGTGCCAGAGCAAAATGGGTTGACCCATTTTGAGGCTGGTGATGTGAGG
GCTAAAGAATATGTTAGCCTCTTGAAATCTAATGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGTTCTATTGGCCATATTGTTGCTTATTATATCTTGGC
TACTTCTAGCAATGGCTATGATCCCAAGTTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGCCGCCTCCTCCTCTGCCGTCTTTGCCGCCCCGACCTTCTCGGCTACCGCCACAAGGCAGCAGCCGAGCCCCACCACCGTATCATTCCAAGGCCTCCGCGC
GCTCCCAAGCGTGAAATCAAGCCGCTCAGGAGTCGCAGCGAAAAGCCGGAGATCGGTGGTGGTGAAGGCGGAGTTGAACCCATCTCTAGTGATAAGCTTGAGCACAGGGC
TGTCCTTGTTCTTAGGAAGGTTTGTTTTCTTCAATTTCCAAAGGGAGAATGTGAGCAAACAAGTGCCAGAGCAAAATGGGTTGACCCATTTTGAGGCTGGTGATGTGAGG
GCTAAAGAATATGTTAGCCTCTTGAAATCTAATGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGTTCTATTGGCCATATTGTTGCTTATTATATCTTGGC
TACTTCTAGCAATGGCTATGATCCCAAGTTCTTCTAG
Protein sequenceShow/hide protein sequence
MAAAASSSAVFAAPTFSATATRQQPSPTTVSFQGLRALPSVKSSRSGVAAKSRRSVVVKAELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGLTHFEAGDVR
AKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF