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Lsi05G005490 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G005490
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglycine-rich protein 5
Genome locationchr05:6831579..6831974
RNA-Seq ExpressionLsi05G005490
SyntenyLsi05G005490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
THG17012.1 hypothetical protein TEA_027229 [Camellia sinensis var. sinensis]2.4e-0459.41Show/hide
Query:  MACKLFFLMLLGVLVCTTGARKLVHD---PLKDEK-FFH-------------------GGGLGGGFGGGGGAGG--------GFGGGSGFGGGAGGGYGG
        M CK   L+LLG LVCTT ARKLV       +DEK FFH                   GGG GGG GGGGGAGG        G GGG G GGG GGG+GG
Subjt:  MACKLFFLMLLGVLVCTTGARKLVHD---PLKDEK-FFH-------------------GGGLGGGFGGGGGAGG--------GFGGGSGFGGGAGGGYGG

Query:  GGGSGG------GFGGGSGGGFGSGGGFGRGAGSGGGGGFGGGSGG--GGGLGGGFGGGAGSGAGFGGFP
        GGG GG      GFGGG+GGGFGSGGG G GAG GGGGGFGGG GG  GGG GGGFGGGAG G G GG P
Subjt:  GGGSGG------GFGGGSGGGFGSGGGFGRGAGSGGGGGFGGGSGG--GGGLGGGFGGGAGSGAGFGGFP

XP_012070859.1 glycine-rich cell wall structural protein [Jatropha curcas]8.3e-0570Show/hide
Query:  KLFFLMLLGVLVCTTG-ARKLVHDPLKDEK-FFHGGGLGGGFGGGGGAGGGFGGGSGFGGGA--GGGYGGGGGSGGGFGGGSGGGFGSGGGFGRGAGSGG
        KL  ++LLG LVCTT  ARKLV    +DEK  FHGGGLGGG GGGGGAGGG GGGSG GGGA  GGG G GGG+G G G G GGGFG G G G G G G 
Subjt:  KLFFLMLLGVLVCTTG-ARKLVHDPLKDEK-FFHGGGLGGGFGGGGGAGGGFGGGSGFGGGA--GGGYGGGGGSGGGFGGGSGGGFGSGGGFGRGAGSGG

Query:  GGGFGGGSGGGGGLGGGFGGGAGSGAGFGG
        GGGFGGG+G GGG+GGG GGGAG G GFGG
Subjt:  GGGFGGGSGGGGGLGGGFGGGAGSGAGFGG

XP_022151305.1 glycine-rich protein 5 [Momordica charantia]9.2e-0466.2Show/hide
Query:  MACKLFFLMLLGVLVCTTG-ARKLVHDPLKDEKFFH-----GGGLGGGFGGGGGA--GGGFGGGSGFGGGAGGGYGGG-----GGSGGGFGGGSGGGFGS
        MA K+ FL+LL   +CTT  ARKL      D+KFFH     GGG GGGFGGGGG   GGGFGGGSGFGGGAGGG GGG     GG GGG GGG G G G+
Subjt:  MACKLFFLMLLGVLVCTTG-ARKLVHDPLKDEKFFH-----GGGLGGGFGGGGGA--GGGFGGGSGFGGGAGGGYGGG-----GGSGGGFGGGSGGGFGS

Query:  GGGFGRGAGSGGGGGFGGGSGGGGGLGGGFGGGAGSGAGFGG
        GGGFG GAG+GGG G GGG+GGGGG GGG GGG G G+GFGG
Subjt:  GGGFGRGAGSGGGGGFGGGSGGGGGLGGGFGGGAGSGAGFGG

XP_028063432.1 glycine-rich protein 5-like [Camellia sinensis]2.4e-0459.41Show/hide
Query:  MACKLFFLMLLGVLVCTTGARKLVHD---PLKDEK-FFH-------------------GGGLGGGFGGGGGAGG--------GFGGGSGFGGGAGGGYGG
        M CK   L+LLG LVCTT ARKLV       +DEK FFH                   GGG GGG GGGGGAGG        G GGG G GGG GGG+GG
Subjt:  MACKLFFLMLLGVLVCTTGARKLVHD---PLKDEK-FFH-------------------GGGLGGGFGGGGGAGG--------GFGGGSGFGGGAGGGYGG

Query:  GGGSGG------GFGGGSGGGFGSGGGFGRGAGSGGGGGFGGGSGG--GGGLGGGFGGGAGSGAGFGGFP
        GGG GG      GFGGG+GGGFGSGGG G GAG GGGGGFGGG GG  GGG GGGFGGGAG G G GG P
Subjt:  GGGSGG------GFGGGSGGGFGSGGGFGRGAGSGGGGGFGGGSGG--GGGLGGGFGGGAGSGAGFGGFP

XP_031737995.1 glycine-rich protein 5 [Cucumis sativus]5.7e-2283.94Show/hide
Query:  MACKLFFLMLLGVLVCTTGARKLVHDPLKDEKFFHGGGL----GGGFGGGGGAGGGFGGGSGFGGGA--GGGYGGGGGSGGGFGGGSGGGFGSGGGFGRG
        MACKLFFLMLLGV  C TGARKL HDPLKDEKFFHGGGL    GGG GGGGGAGGGFGGGSGFGGG+  GGG GGG G GGG GGGSGGGFGSGGGFG G
Subjt:  MACKLFFLMLLGVLVCTTGARKLVHDPLKDEKFFHGGGL----GGGFGGGGGAGGGFGGGSGFGGGA--GGGYGGGGGSGGGFGGGSGGGFGSGGGFGRG

Query:  AGSGGGGGFGGGSGGGGGLGGGFGGGAGSGAGFGGFP
         GSGGGGGFGGGSGGGGGLGGG+GGG GSG GFG FP
Subjt:  AGSGGGGGFGGGSGGGGGLGGGFGGGAGSGAGFGGFP

TrEMBL top hitse value%identityAlignment
A0A067KVZ9 Uncharacterized protein4.0e-0570Show/hide
Query:  KLFFLMLLGVLVCTTG-ARKLVHDPLKDEK-FFHGGGLGGGFGGGGGAGGGFGGGSGFGGGA--GGGYGGGGGSGGGFGGGSGGGFGSGGGFGRGAGSGG
        KL  ++LLG LVCTT  ARKLV    +DEK  FHGGGLGGG GGGGGAGGG GGGSG GGGA  GGG G GGG+G G G G GGGFG G G G G G G 
Subjt:  KLFFLMLLGVLVCTTG-ARKLVHDPLKDEK-FFHGGGLGGGFGGGGGAGGGFGGGSGFGGGA--GGGYGGGGGSGGGFGGGSGGGFGSGGGFGRGAGSGG

Query:  GGGFGGGSGGGGGLGGGFGGGAGSGAGFGG
        GGGFGGG+G GGG+GGG GGGAG G GFGG
Subjt:  GGGFGGGSGGGGGLGGGFGGGAGSGAGFGG

A0A0A0L4Y2 Uncharacterized protein2.8e-2283.94Show/hide
Query:  MACKLFFLMLLGVLVCTTGARKLVHDPLKDEKFFHGGGL----GGGFGGGGGAGGGFGGGSGFGGGA--GGGYGGGGGSGGGFGGGSGGGFGSGGGFGRG
        MACKLFFLMLLGV  C TGARKL HDPLKDEKFFHGGGL    GGG GGGGGAGGGFGGGSGFGGG+  GGG GGG G GGG GGGSGGGFGSGGGFG G
Subjt:  MACKLFFLMLLGVLVCTTGARKLVHDPLKDEKFFHGGGL----GGGFGGGGGAGGGFGGGSGFGGGA--GGGYGGGGGSGGGFGGGSGGGFGSGGGFGRG

Query:  AGSGGGGGFGGGSGGGGGLGGGFGGGAGSGAGFGGFP
         GSGGGGGFGGGSGGGGGLGGG+GGG GSG GFG FP
Subjt:  AGSGGGGGFGGGSGGGGGLGGGFGGGAGSGAGFGGFP

A0A4S4EL93 Uncharacterized protein1.2e-0459.41Show/hide
Query:  MACKLFFLMLLGVLVCTTGARKLVHD---PLKDEK-FFH-------------------GGGLGGGFGGGGGAGG--------GFGGGSGFGGGAGGGYGG
        M CK   L+LLG LVCTT ARKLV       +DEK FFH                   GGG GGG GGGGGAGG        G GGG G GGG GGG+GG
Subjt:  MACKLFFLMLLGVLVCTTGARKLVHD---PLKDEK-FFH-------------------GGGLGGGFGGGGGAGG--------GFGGGSGFGGGAGGGYGG

Query:  GGGSGG------GFGGGSGGGFGSGGGFGRGAGSGGGGGFGGGSGG--GGGLGGGFGGGAGSGAGFGGFP
        GGG GG      GFGGG+GGGFGSGGG G GAG GGGGGFGGG GG  GGG GGGFGGGAG G G GG P
Subjt:  GGGSGG------GFGGGSGGGFGSGGGFGRGAGSGGGGGFGGGSGG--GGGLGGGFGGGAGSGAGFGGFP

A0A5D3BB90 Glycine-rich cell wall structural protein-like9.9e-0465.75Show/hide
Query:  MACKLFFLMLLGV-LVCTTGARKLVHDPLKDEKFFH---------GGGLGGGFGG------GGGAGGGFGGGSGFGGGAGGGYGGGGGSGGGFGGGSGGG
        MA K+ FL+ LG  L  T+GARKL     +DEKFFH         GGG GGGFGG      GGG+GGGFGGGSGFGGG GGG GGGGG GGG GGG GGG
Subjt:  MACKLFFLMLLGV-LVCTTGARKLVHDPLKDEKFFH---------GGGLGGGFGG------GGGAGGGFGGGSGFGGGAGGGYGGGGGSGGGFGGGSGGG

Query:  FGSGGGFGRGAGSGGGGGFGGGSGGGGGLGGGFGGGAGSGAGFGGF
         G GGG G G GSGGGGG GGG+GGGGG GGG GGG G GAG GGF
Subjt:  FGSGGGFGRGAGSGGGGGFGGGSGGGGGLGGGFGGGAGSGAGFGGF

A0A6J1DAT8 glycine-rich protein 54.4e-0466.2Show/hide
Query:  MACKLFFLMLLGVLVCTTG-ARKLVHDPLKDEKFFH-----GGGLGGGFGGGGGA--GGGFGGGSGFGGGAGGGYGGG-----GGSGGGFGGGSGGGFGS
        MA K+ FL+LL   +CTT  ARKL      D+KFFH     GGG GGGFGGGGG   GGGFGGGSGFGGGAGGG GGG     GG GGG GGG G G G+
Subjt:  MACKLFFLMLLGVLVCTTG-ARKLVHDPLKDEKFFH-----GGGLGGGFGGGGGA--GGGFGGGSGFGGGAGGGYGGG-----GGSGGGFGGGSGGGFGS

Query:  GGGFGRGAGSGGGGGFGGGSGGGGGLGGGFGGGAGSGAGFGG
        GGGFG GAG+GGG G GGG+GGGGG GGG GGG G G+GFGG
Subjt:  GGGFGRGAGSGGGGGFGGGSGGGGGLGGGFGGGAGSGAGFGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGCAAGCTTTTCTTTCTCATGCTCCTTGGCGTCTTAGTTTGCACCACAGGAGCTCGAAAGCTCGTCCACGATCCTTTAAAAGATGAGAAGTTTTTCCATGGTGG
TGGATTAGGTGGGGGGTTTGGCGGAGGCGGTGGTGCAGGAGGTGGTTTTGGTGGAGGATCTGGATTTGGTGGGGGTGCTGGTGGCGGTTACGGTGGTGGTGGAGGTAGTG
GAGGAGGTTTTGGAGGTGGATCTGGTGGAGGGTTCGGTTCAGGTGGTGGATTTGGTAGAGGTGCTGGTAGTGGAGGGGGTGGAGGGTTTGGTGGCGGTAGCGGTGGCGGT
GGCGGACTTGGTGGAGGATTCGGTGGAGGCGCTGGGAGTGGCGCTGGATTTGGAGGGTTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGCAAGCTTTTCTTTCTCATGCTCCTTGGCGTCTTAGTTTGCACCACAGGAGCTCGAAAGCTCGTCCACGATCCTTTAAAAGATGAGAAGTTTTTCCATGGTGG
TGGATTAGGTGGGGGGTTTGGCGGAGGCGGTGGTGCAGGAGGTGGTTTTGGTGGAGGATCTGGATTTGGTGGGGGTGCTGGTGGCGGTTACGGTGGTGGTGGAGGTAGTG
GAGGAGGTTTTGGAGGTGGATCTGGTGGAGGGTTCGGTTCAGGTGGTGGATTTGGTAGAGGTGCTGGTAGTGGAGGGGGTGGAGGGTTTGGTGGCGGTAGCGGTGGCGGT
GGCGGACTTGGTGGAGGATTCGGTGGAGGCGCTGGGAGTGGCGCTGGATTTGGAGGGTTTCCTTGA
Protein sequenceShow/hide protein sequence
MACKLFFLMLLGVLVCTTGARKLVHDPLKDEKFFHGGGLGGGFGGGGGAGGGFGGGSGFGGGAGGGYGGGGGSGGGFGGGSGGGFGSGGGFGRGAGSGGGGGFGGGSGGG
GGLGGGFGGGAGSGAGFGGFP