; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G005510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G005510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:6849916..6868444
RNA-Seq ExpressionLsi05G005510
SyntenyLsi05G005510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650119.1 hypothetical protein Csa_009728 [Cucumis sativus]7.0e-0484.8Show/hide
Query:  GNPPPAPAPPPNPPPAPPPSPPPPPNPPPPPAPPPPPPPPSPPPPPEPPPNPAPPPKPLPPPSPPPPPP----------PPPRPPPNPDPPPKPPPEPPP
        GNPPPAPAPPPNPPPAPPPSPPPPP PP PP PP PPPPPS  PPPEPPPNPAPPPKPLPPPSPPPPPP          PPP PPPNPDPPPKPPPEPPP
Subjt:  GNPPPAPAPPPNPPPAPPPSPPPPPNPPPPPAPPPPPPPPSPPPPPEPPPNPAPPPKPLPPPSPPPPPP----------PPPRPPPNPDPPPKPPPEPPP

Query:  NPPPPPPPNPPPPPPPKPPPPNPGR
        NPPPPPPPNPPPPPPP PPPPN GR
Subjt:  NPPPPPPPNPPPPPPPKPPPPNPGR
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTGCAATCTTCAGAAAAGCTCTTTGATCTCCAATTCCAGCAGACTTGGAGAAGACAACATCATACTTCTTAGTCATATTGGGATACAGAAGCCCCCATTTTCGCA
CAGGTCGAGCTCCCTGTTCTTCTTCCCCATCAAACAGCTGATATATGTAAGTTTGCATCACTCCTTCCCTCCTCAACGGCGTTCCGAAACCCGATTTCAGGTGTGCAACC
AACCCCTTCAGGTACATTTCCGCGTAAGCATGATTCGCTTCGACCTCGCTGGAGTCGGTCCCAAAGCTTGGCCACCCAGTCTCCGTCACAATAACCGGAACATTCTCGTG
TCCGGCCGCCGCCATTGCACTAATCACTGCATCTATCATGGAGTCAAAAAGATTCCGGTACCGAACACCAGTGATCACATCATCCCTGAAATTGAAAGGGTGATTCTGAA
ACAGAGCATATGCAATTGGGATTTCGAAGTTCAATCGGTACAAATTGTAAGGCGCCGTGTACACATTTCTGATTGCGGGCAAAAGAATCGTCGCGAATTCAGGGGAAGCT
TCGAGAAAGTCGTTGCCGACGGAGATGGTGGTGATGATCGTCCGAGGGTAGAAGGGGACGACATAGGCGTAAAGCCACCGGAAAGCGGCGGAGCGATTGGCGGCAATGGG
GGCTACCATGAAATTAGGGATTGTGAGGAGGAGAGTGATGCGAAGGCTCGGACTACGTTGGGGTCGGAATCTTCAAGTCTCACAGCGGTGAGTTTGAGGGAATCTATGGC
TTTGGCCACTGAGTCGGGTGGCTGGAGGCGGTGGGTGGAGTTGACAGTGGCGGCGGAGAAGGTGACGCCGATGGTGGTGAGGGAGTTGGTTGGATGGGGAAGTGAGAGAA
AGAAGAGAGAGAGGGAAATGGTGAGGAAGATTGACCGGAGCGGCATGGCGGAAGACGGCCGGAGAAAGAACTGTTCGGTGGCAGTTGATTTGGCTGTTATAGATTGGGGG
AATGTGTGTGGCGTGTGCAGTGCTTCACTGTTACGGAGAGTGAGTTGGCTTTGGCGGGAATTTCCGTTGCAATTGCAACTTAGTCCTCCTCATAATTTCTTCACGGGAAA
TCCACCTCCTGCACCGGCCCCGCCACCAAACCCTCCGCCTGCTCCGCCCCCAAGTCCACCCCCACCGCCAAACCCTCCTCCACCACCAGCGCCGCCGCCACCACCACCAC
CACCAAGTCCACCTCCTCCACCAGAGCCTCCTCCGAATCCTGCTCCACCTCCAAAACCGCTCCCTCCGCCTAGTCCACCGCCTCCTCCTCCACCACCACCAAGACCACCA
CCAAATCCAGATCCTCCACCAAAACCACCTCCCGAACCACCGCCTAACCCTCCGCCTCCACCTCCACCAAACCCTCCACCACCGCCTCCACCCAAACCGCCACCCCCAAA
TCCGGGACGTACTCAACTTGCGAGAAGCAGAAGTGGTGCAGAGAAAAGCACCAAGAAGCACAAGAAAGACAATCTTGGAAGTCATATTCTTGCAAAGGCTTCTAAAGCTA
AGAAGGAGTATATGTCTCGAGTTCCATATGCTAGTGCTACTAACCAGAGCGGTCCTCGTGGAGGCGGCACATCCAAAGCTGCAAATCCACTGATGCATTCAGTTACAGGC
GTAAGCTCAAAGACCTTTCCACCAATAGTAAATGAAATATTAGGCAAAGTAGACAAGGAATCACAATCAATTACTGATTCTCCCATTGGACTAGGCAACTTCTCGCAGAG
CTGCAATCACAATAGACGACTACATGAGCAGCTGGCTTTGTGCCCATACAACCGCCATCTCACATGCGTTGCACATAACATCACGCAAACCATTCGAAGACTTCTGGGTG
GTGTTGTCGACAACGCTCTCAATGCCCATACTGAAACCAGTTTCACCAAAAGATGGACAGGAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTGCAATCTTCAGAAAAGCTCTTTGATCTCCAATTCCAGCAGACTTGGAGAAGACAACATCATACTTCTTAGTCATATTGGGATACAGAAGCCCCCATTTTCGCA
CAGGTCGAGCTCCCTGTTCTTCTTCCCCATCAAACAGCTGATATATGTAAGTTTGCATCACTCCTTCCCTCCTCAACGGCGTTCCGAAACCCGATTTCAGGTGTGCAACC
AACCCCTTCAGGTACATTTCCGCGTAAGCATGATTCGCTTCGACCTCGCTGGAGTCGGTCCCAAAGCTTGGCCACCCAGTCTCCGTCACAATAACCGGAACATTCTCGTG
TCCGGCCGCCGCCATTGCACTAATCACTGCATCTATCATGGAGTCAAAAAGATTCCGGTACCGAACACCAGTGATCACATCATCCCTGAAATTGAAAGGGTGATTCTGAA
ACAGAGCATATGCAATTGGGATTTCGAAGTTCAATCGGTACAAATTGTAAGGCGCCGTGTACACATTTCTGATTGCGGGCAAAAGAATCGTCGCGAATTCAGGGGAAGCT
TCGAGAAAGTCGTTGCCGACGGAGATGGTGGTGATGATCGTCCGAGGGTAGAAGGGGACGACATAGGCGTAAAGCCACCGGAAAGCGGCGGAGCGATTGGCGGCAATGGG
GGCTACCATGAAATTAGGGATTGTGAGGAGGAGAGTGATGCGAAGGCTCGGACTACGTTGGGGTCGGAATCTTCAAGTCTCACAGCGGTGAGTTTGAGGGAATCTATGGC
TTTGGCCACTGAGTCGGGTGGCTGGAGGCGGTGGGTGGAGTTGACAGTGGCGGCGGAGAAGGTGACGCCGATGGTGGTGAGGGAGTTGGTTGGATGGGGAAGTGAGAGAA
AGAAGAGAGAGAGGGAAATGGTGAGGAAGATTGACCGGAGCGGCATGGCGGAAGACGGCCGGAGAAAGAACTGTTCGGTGGCAGTTGATTTGGCTGTTATAGATTGGGGG
AATGTGTGTGGCGTGTGCAGTGCTTCACTGTTACGGAGAGTGAGTTGGCTTTGGCGGGAATTTCCGTTGCAATTGCAACTTAGTCCTCCTCATAATTTCTTCACGGGAAA
TCCACCTCCTGCACCGGCCCCGCCACCAAACCCTCCGCCTGCTCCGCCCCCAAGTCCACCCCCACCGCCAAACCCTCCTCCACCACCAGCGCCGCCGCCACCACCACCAC
CACCAAGTCCACCTCCTCCACCAGAGCCTCCTCCGAATCCTGCTCCACCTCCAAAACCGCTCCCTCCGCCTAGTCCACCGCCTCCTCCTCCACCACCACCAAGACCACCA
CCAAATCCAGATCCTCCACCAAAACCACCTCCCGAACCACCGCCTAACCCTCCGCCTCCACCTCCACCAAACCCTCCACCACCGCCTCCACCCAAACCGCCACCCCCAAA
TCCGGGACGTACTCAACTTGCGAGAAGCAGAAGTGGTGCAGAGAAAAGCACCAAGAAGCACAAGAAAGACAATCTTGGAAGTCATATTCTTGCAAAGGCTTCTAAAGCTA
AGAAGGAGTATATGTCTCGAGTTCCATATGCTAGTGCTACTAACCAGAGCGGTCCTCGTGGAGGCGGCACATCCAAAGCTGCAAATCCACTGATGCATTCAGTTACAGGC
GTAAGCTCAAAGACCTTTCCACCAATAGTAAATGAAATATTAGGCAAAGTAGACAAGGAATCACAATCAATTACTGATTCTCCCATTGGACTAGGCAACTTCTCGCAGAG
CTGCAATCACAATAGACGACTACATGAGCAGCTGGCTTTGTGCCCATACAACCGCCATCTCACATGCGTTGCACATAACATCACGCAAACCATTCGAAGACTTCTGGGTG
GTGTTGTCGACAACGCTCTCAATGCCCATACTGAAACCAGTTTCACCAAAAGATGGACAGGAATGTAA
Protein sequenceShow/hide protein sequence
MSCNLQKSSLISNSSRLGEDNIILLSHIGIQKPPFSHRSSSLFFFPIKQLIYVSLHHSFPPQRRSETRFQVCNQPLQVHFRVSMIRFDLAGVGPKAWPPSLRHNNRNILV
SGRRHCTNHCIYHGVKKIPVPNTSDHIIPEIERVILKQSICNWDFEVQSVQIVRRRVHISDCGQKNRREFRGSFEKVVADGDGGDDRPRVEGDDIGVKPPESGGAIGGNG
GYHEIRDCEEESDAKARTTLGSESSSLTAVSLRESMALATESGGWRRWVELTVAAEKVTPMVVRELVGWGSERKKREREMVRKIDRSGMAEDGRRKNCSVAVDLAVIDWG
NVCGVCSASLLRRVSWLWREFPLQLQLSPPHNFFTGNPPPAPAPPPNPPPAPPPSPPPPPNPPPPPAPPPPPPPPSPPPPPEPPPNPAPPPKPLPPPSPPPPPPPPPRPP
PNPDPPPKPPPEPPPNPPPPPPPNPPPPPPPKPPPPNPGRTQLARSRSGAEKSTKKHKKDNLGSHILAKASKAKKEYMSRVPYASATNQSGPRGGGTSKAANPLMHSVTG
VSSKTFPPIVNEILGKVDKESQSITDSPIGLGNFSQSCNHNRRLHEQLALCPYNRHLTCVAHNITQTIRRLLGGVVDNALNAHTETSFTKRWTGM