; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G005530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G005530
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlycine-rich cell wall structural protein-like
Genome locationchr05:6857153..6857608
RNA-Seq ExpressionLsi05G005530
SyntenyLsi05G005530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065824.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]1.4e-1984.28Show/hide
Query:  MTSKIVFLVLLGAFLCTTSASRKLSTASFQDAKFFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGLGG--------GGGGGGGLGGG
        M SKIVFLV LGAFL +TS +RKLSTASFQD KFFHRP FGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGG+GG        GGGGGGG+GGG
Subjt:  MTSKIVFLVLLGAFLCTTSASRKLSTASFQDAKFFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGLGG--------GGGGGGGLGGG

Query:  SGFGGGAGFGGGSGGGGGLGGGGGGGGAGGGGGFGGGGGLGGGAGGGFGGGAGAGGGFP
        SGFGGGAGFGGGSGGGGGLGGG GGGG  GG   GGGGGLGGGAGGGFGGGAGAGGG+P
Subjt:  SGFGGGAGFGGGSGGGGGLGGGGGGGGAGGGGGFGGGGGLGGGAGGGFGGGAGAGGGFP

KAA0065825.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]4.0e-1984.47Show/hide
Query:  MTSKIVFLVLLGAFLCTTSASRKLSTASFQDAKFFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGLGG----------GGGGGGGLG
        M SKIVFLV LGAFL TTS +RKLSTASFQD KFFHRP +GGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGG+GG          GGGGGGGLG
Subjt:  MTSKIVFLVLLGAFLCTTSASRKLSTASFQDAKFFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGLGG----------GGGGGGGLG

Query:  GGSGFGGGAGFGGGSGGGGGLGGGGGGGGAGGGGGFGGGGGLGGGAGGGFGGGAGAGGGFP
        GGSGFGGGAGFGGGSGGGGGLGGGGG GG GG GG GGGGGLGGGAGGGFG GAG GGGFP
Subjt:  GGSGFGGGAGFGGGSGGGGGLGGGGGGGGAGGGGGFGGGGGLGGGAGGGFGGGAGAGGGFP

KAG5027289.1 hypothetical protein JHK86_023203 [Glycine max]7.3e-0568.64Show/hide
Query:  MTSKIVFLVLLGAFLCTTSASRKLST--ASFQDAK-FFHRPGF---GGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGS----------GFGGGLGGGGG
        M S+++ L LLGA +CT   +RKL +   SF+D K FFHRPGF   GGGG GGGGGGG GGG GGGLGGG+GGGFG G+          GFGGG GGG G
Subjt:  MTSKIVFLVLLGAFLCTTSASRKLST--ASFQDAK-FFHRPGF---GGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGS----------GFGGGLGGGGG

Query:  GGGGLGGGSGFGGGAGFGGGSGGGGGLGGGGGGGGAGGGGGFGGGGGLGGGAGGGFGG--GAGAGGGFP
        GGGG+GGGSGFGGGAGFGGG+G GGGLGGGGGGG  G     GGGGGLGGGAGGGFGG  GAGAGGGFP
Subjt:  GGGGLGGGSGFGGGAGFGGGSGGGGGLGGGGGGGGAGGGGGFGGGGGLGGGAGGGFGG--GAGAGGGFP

XP_011650511.1 glycine-rich cell wall structural protein-like [Cucumis sativus]1.3e-1783.85Show/hide
Query:  MTSKIVFLVLLGAFLCTTSASRKLSTASFQDAKFFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGLGG----------GGGGGGGLG
        M SKIVFLV LGAFL +TS +RKLSTASFQD KFF RP FGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGG+GG          GGGGGGGLG
Subjt:  MTSKIVFLVLLGAFLCTTSASRKLSTASFQDAKFFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGLGG----------GGGGGGGLG

Query:  GGSGFGGGAGFGGGSGGGGGLGGGGGGGGAGGGGGFGGGGGLGGGAGGGFGGGAGAGGGFP
        GGSGFGGGAGFGGGS  GGGLGGGGG GG GG GG GGGGGLGGGAGGGFGGGAGAGGGFP
Subjt:  GGSGFGGGAGFGGGSGGGGGLGGGGGGGGAGGGGGFGGGGGLGGGAGGGFGGGAGAGGGFP

XP_022151305.1 glycine-rich protein 5 [Momordica charantia]5.6e-0577.63Show/hide
Query:  MTSKIVFLVLLGAFLCTTSASRKLSTASFQDAKFFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGLGGG-GGGGGGLGGGSGFGGGA
        M SKI+FLVLL AFLCTTS +RKL+T SF D KFFHRPGFGGGG GGG GGG GGG GGG GGGSG G G G G GGG GGG GGGGGGLGGG G GGGA
Subjt:  MTSKIVFLVLLGAFLCTTSASRKLSTASFQDAKFFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGLGGG-GGGGGGLGGGSGFGGGA

Query:  GFGGGSGGGGGLGGG-GGGGGAGGGGGFGGGGGLGGGAGGGFGGGAGAGGGF
          GGG GGG G GGG GGGGGAGGGGGFGGG G G G G GFGGGAGAGGGF
Subjt:  GFGGGSGGGGGLGGG-GGGGGAGGGGGFGGGGGLGGGAGGGFGGGAGAGGGF

TrEMBL top hitse value%identityAlignment
A0A0A0L2A7 Uncharacterized protein3.1e-0975.93Show/hide
Query:  MTSKIVFLVLLGAFLCTTSASRKLSTASFQDAKFFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGLGG--GGGGGGGLGGGSGFGGG
        M SKIVFLV LGAFL +TS +RKLSTASFQD KFF RP FGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGG+GG  GGGGGGG GGG G G G
Subjt:  MTSKIVFLVLLGAFLCTTSASRKLSTASFQDAKFFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGLGG--GGGGGGGLGGGSGFGGG

Query:  AGFGGGSGGGGG-----------LGGGGGGGGAGGGGGFGGGGGLGGGAGGGFGGGAGAGGG
         G GGG GGG G            GGGG GGG GGG G GGGGGLGGG+GGGFGGG+G GGG
Subjt:  AGFGGGSGGGGG-----------LGGGGGGGGAGGGGGFGGGGGLGGGAGGGFGGGAGAGGG

A0A5A7VJD1 Glycine-rich cell wall structural protein-like1.9e-1984.47Show/hide
Query:  MTSKIVFLVLLGAFLCTTSASRKLSTASFQDAKFFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGLGG----------GGGGGGGLG
        M SKIVFLV LGAFL TTS +RKLSTASFQD KFFHRP +GGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGG+GG          GGGGGGGLG
Subjt:  MTSKIVFLVLLGAFLCTTSASRKLSTASFQDAKFFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGLGG----------GGGGGGGLG

Query:  GGSGFGGGAGFGGGSGGGGGLGGGGGGGGAGGGGGFGGGGGLGGGAGGGFGGGAGAGGGFP
        GGSGFGGGAGFGGGSGGGGGLGGGGG GG GG GG GGGGGLGGGAGGGFG GAG GGGFP
Subjt:  GGSGFGGGAGFGGGSGGGGGLGGGGGGGGAGGGGGFGGGGGLGGGAGGGFGGGAGAGGGFP

A0A5D3BB90 Glycine-rich cell wall structural protein-like6.7e-2084.28Show/hide
Query:  MTSKIVFLVLLGAFLCTTSASRKLSTASFQDAKFFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGLGG--------GGGGGGGLGGG
        M SKIVFLV LGAFL +TS +RKLSTASFQD KFFHRP FGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGG+GG        GGGGGGG+GGG
Subjt:  MTSKIVFLVLLGAFLCTTSASRKLSTASFQDAKFFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGLGG--------GGGGGGGLGGG

Query:  SGFGGGAGFGGGSGGGGGLGGGGGGGGAGGGGGFGGGGGLGGGAGGGFGGGAGAGGGFP
        SGFGGGAGFGGGSGGGGGLGGG GGGG  GG   GGGGGLGGGAGGGFGGGAGAGGG+P
Subjt:  SGFGGGAGFGGGSGGGGGLGGGGGGGGAGGGGGFGGGGGLGGGAGGGFGGGAGAGGGFP

A0A6J1DAT8 glycine-rich protein 52.7e-0577.63Show/hide
Query:  MTSKIVFLVLLGAFLCTTSASRKLSTASFQDAKFFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGLGGG-GGGGGGLGGGSGFGGGA
        M SKI+FLVLL AFLCTTS +RKL+T SF D KFFHRPGFGGGG GGG GGG GGG GGG GGGSG G G G G GGG GGG GGGGGGLGGG G GGGA
Subjt:  MTSKIVFLVLLGAFLCTTSASRKLSTASFQDAKFFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGLGGG-GGGGGGLGGGSGFGGGA

Query:  GFGGGSGGGGGLGGG-GGGGGAGGGGGFGGGGGLGGGAGGGFGGGAGAGGGF
          GGG GGG G GGG GGGGGAGGGGGFGGG G G G G GFGGGAGAGGGF
Subjt:  GFGGGSGGGGGLGGG-GGGGGAGGGGGFGGGGGLGGGAGGGFGGGAGAGGGF

V7BKK6 Uncharacterized protein1.8e-0472.39Show/hide
Query:  MTSKIVFLVLLGAFLCTTSASRKLST--ASFQDAK-FFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGF----GGGSGFGGGLGGGG----GGGGGL
        M S+++   +LGA +CT  A RKL +   SF+D K FFH PGF GGGLGGGGGGGFGGGGGGGLGGGSGGGF    G G G GGGLGGGG    GGGGG 
Subjt:  MTSKIVFLVLLGAFLCTTSASRKLST--ASFQDAK-FFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGF----GGGSGFGGGLGGGG----GGGGGL

Query:  GGGSGFGGGAGFGGGSGGGGGLGGGGGGGGAGGGGGFGG-GGGLGGGAGGGFGGGAGAGGGFP
        GGG+GFGGG+GFGGG+G GGGLGGGGGGG  GGGG  GG G GLGGGAGGGFGGGAGAGGGFP
Subjt:  GGGSGFGGGAGFGGGSGGGGGLGGGGGGGGAGGGGGFGG-GGGLGGGAGGGFGGGAGAGGGFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCCAAGATTGTCTTTCTTGTGCTTCTTGGTGCTTTTCTCTGCACCACTTCTGCTTCTCGCAAGTTGAGTACTGCCTCTTTTCAAGATGCGAAGTTCTTTCACCG
TCCCGGATTTGGGGGTGGCGGTTTGGGTGGAGGCGGTGGTGGAGGGTTTGGTGGAGGTGGAGGCGGAGGGTTAGGCGGTGGTTCGGGAGGTGGTTTTGGTGGAGGATCTG
GATTTGGTGGTGGTCTTGGTGGTGGTGGAGGAGGAGGCGGTGGACTAGGCGGAGGGAGCGGTTTTGGAGGTGGAGCAGGATTCGGAGGAGGCTCTGGTGGAGGAGGTGGA
CTTGGTGGTGGTGGTGGTGGCGGCGGCGCTGGTGGTGGAGGAGGGTTTGGCGGTGGGGGTGGACTTGGGGGCGGAGCAGGCGGAGGGTTTGGTGGCGGGGCCGGTGCAGG
AGGTGGATTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTCCAAGATTGTCTTTCTTGTGCTTCTTGGTGCTTTTCTCTGCACCACTTCTGCTTCTCGCAAGTTGAGTACTGCCTCTTTTCAAGATGCGAAGTTCTTTCACCG
TCCCGGATTTGGGGGTGGCGGTTTGGGTGGAGGCGGTGGTGGAGGGTTTGGTGGAGGTGGAGGCGGAGGGTTAGGCGGTGGTTCGGGAGGTGGTTTTGGTGGAGGATCTG
GATTTGGTGGTGGTCTTGGTGGTGGTGGAGGAGGAGGCGGTGGACTAGGCGGAGGGAGCGGTTTTGGAGGTGGAGCAGGATTCGGAGGAGGCTCTGGTGGAGGAGGTGGA
CTTGGTGGTGGTGGTGGTGGCGGCGGCGCTGGTGGTGGAGGAGGGTTTGGCGGTGGGGGTGGACTTGGGGGCGGAGCAGGCGGAGGGTTTGGTGGCGGGGCCGGTGCAGG
AGGTGGATTTCCTTGA
Protein sequenceShow/hide protein sequence
MTSKIVFLVLLGAFLCTTSASRKLSTASFQDAKFFHRPGFGGGGLGGGGGGGFGGGGGGGLGGGSGGGFGGGSGFGGGLGGGGGGGGGLGGGSGFGGGAGFGGGSGGGGG
LGGGGGGGGAGGGGGFGGGGGLGGGAGGGFGGGAGAGGGFP