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Lsi05G005750 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G005750
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:7144123..7144619
RNA-Seq ExpressionLsi05G005750
SyntenyLsi05G005750
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055854.1 uncharacterized protein E6C27_scaffold104G00300 [Cucumis melo var. makuwa]7.7e-1754.14Show/hide
Query:  MKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIAS----SCP-----SLFPRR--YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEKE
        MK +G     I T RSN   +M NPL   VIAS    S P     SLFPRR  YGKP  ++E    GGE+SKA+RAPSTAEEFNR+A EKE+    EE +
Subjt:  MKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIAS----SCP-----SLFPRR--YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEKE

Query:  VHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS
         HD+ V K+S  +EK++ PN+ INKGPNYRPCS
Subjt:  VHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS

KAG6596946.1 hypothetical protein SDJN03_10126, partial [Cucurbita argyrosperma subsp. sororia]8.0e-0639.52Show/hide
Query:  MKMLGSHIFGIFTCRSNIIRSMPNPLL-YQVIASSCPSLFPRRYGKPSKE--------EEGGGEKSKADRAPSTAEEFNRVAAEKEAEEKEVHDQGVAKK
        M M+GS      TCR     +  +PLL    +    PSL  RRY KP  +        E+G   +S  DRAPS AEEFNR+A EK    KE   +   K+
Subjt:  MKMLGSHIFGIFTCRSNIIRSMPNPLL-YQVIASSCPSLFPRRYGKPSKE--------EEGGGEKSKADRAPSTAEEFNRVAAEKEAEEKEVHDQGVAKK

Query:  SEAIEKNNGPNDDINKGPNYRPCS
        SE  +K    + +++ GPNYRPCS
Subjt:  SEAIEKNNGPNDDINKGPNYRPCS

KGN56105.1 hypothetical protein Csa_009481 [Cucumis sativus]2.0e-2046.07Show/hide
Query:  MANKESSRRQPKSRPRRL------------YIKIMKMKMLGSHI----FGIF--TCRSNIIRSMPNPLLYQVIASSC-----------PSLFPRRYGKPS
        MANKE+S+  P  RPRRL             + ++K  +L ++I     GIF   CRSN   +M     +Q++AS             PSLFPRRYGKPS
Subjt:  MANKESSRRQPKSRPRRL------------YIKIMKMKMLGSHI----FGIF--TCRSNIIRSMPNPLLYQVIASSC-----------PSLFPRRYGKPS

Query:  KE--EEGGGEKSKADRAPSTAEEFNRVAAEKEAEEKE------VHDQG-VAKKSE-AIEKNNGPNDDINKGPNYRPCS
        K+  E  GGE+SKA+RAPSTAEEFNR+A EK++++ +      VH +   AK+SE A+EK++ PN+ INKGPNYRPCS
Subjt:  KE--EEGGGEKSKADRAPSTAEEFNRVAAEKEAEEKE------VHDQG-VAKKSE-AIEKNNGPNDDINKGPNYRPCS

XP_016900655.1 PREDICTED: uncharacterized protein LOC107990980 isoform X1 [Cucumis melo]1.0e-1653.73Show/hide
Query:  MKMKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIAS----SCP-----SLFPRR-YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEK
        +KMK +G     I T RSN   +M NPL   VIAS    S P     SLFPRR YGKP  ++E    GGE+SKA+RAPSTAEEFNR+A EKE+    EE 
Subjt:  MKMKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIAS----SCP-----SLFPRR-YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEK

Query:  EVHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS
        + HD+ V K+S  + K++ PN+ INKGPNYRPCS
Subjt:  EVHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS

XP_016900656.1 PREDICTED: uncharacterized protein LOC107990980 isoform X2 [Cucumis melo]6.7e-1360.92Show/hide
Query:  SLFPRR-YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEKEVHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS
        SLFPRR YGKP  ++E    GGE+SKA+RAPSTAEEFNR+A EKE+    EE + HD+ V K+S  + K++ PN+ INKGPNYRPCS
Subjt:  SLFPRR-YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEKEVHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS

TrEMBL top hitse value%identityAlignment
A0A0A0L2C8 Uncharacterized protein9.5e-2146.07Show/hide
Query:  MANKESSRRQPKSRPRRL------------YIKIMKMKMLGSHI----FGIF--TCRSNIIRSMPNPLLYQVIASSC-----------PSLFPRRYGKPS
        MANKE+S+  P  RPRRL             + ++K  +L ++I     GIF   CRSN   +M     +Q++AS             PSLFPRRYGKPS
Subjt:  MANKESSRRQPKSRPRRL------------YIKIMKMKMLGSHI----FGIF--TCRSNIIRSMPNPLLYQVIASSC-----------PSLFPRRYGKPS

Query:  KE--EEGGGEKSKADRAPSTAEEFNRVAAEKEAEEKE------VHDQG-VAKKSE-AIEKNNGPNDDINKGPNYRPCS
        K+  E  GGE+SKA+RAPSTAEEFNR+A EK++++ +      VH +   AK+SE A+EK++ PN+ INKGPNYRPCS
Subjt:  KE--EEGGGEKSKADRAPSTAEEFNRVAAEKEAEEKE------VHDQG-VAKKSE-AIEKNNGPNDDINKGPNYRPCS

A0A1S4DXE7 uncharacterized protein LOC107990980 isoform X23.3e-1360.92Show/hide
Query:  SLFPRR-YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEKEVHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS
        SLFPRR YGKP  ++E    GGE+SKA+RAPSTAEEFNR+A EKE+    EE + HD+ V K+S  + K++ PN+ INKGPNYRPCS
Subjt:  SLFPRR-YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEKEVHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS

A0A1S4DY64 uncharacterized protein LOC107990980 isoform X14.9e-1753.73Show/hide
Query:  MKMKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIAS----SCP-----SLFPRR-YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEK
        +KMK +G     I T RSN   +M NPL   VIAS    S P     SLFPRR YGKP  ++E    GGE+SKA+RAPSTAEEFNR+A EKE+    EE 
Subjt:  MKMKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIAS----SCP-----SLFPRR-YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEK

Query:  EVHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS
        + HD+ V K+S  + K++ PN+ INKGPNYRPCS
Subjt:  EVHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS

A0A5A7UKZ4 Uncharacterized protein3.7e-1754.14Show/hide
Query:  MKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIAS----SCP-----SLFPRR--YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEKE
        MK +G     I T RSN   +M NPL   VIAS    S P     SLFPRR  YGKP  ++E    GGE+SKA+RAPSTAEEFNR+A EKE+    EE +
Subjt:  MKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIAS----SCP-----SLFPRR--YGKPSKEEE---GGGEKSKADRAPSTAEEFNRVAAEKEA----EEKE

Query:  VHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS
         HD+ V K+S  +EK++ PN+ INKGPNYRPCS
Subjt:  VHDQGVAKKSEAIEKNNGPNDDINKGPNYRPCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATAAAGAAAGCTCCAGGAGGCAGCCTAAGAGCAGGCCACGTAGATTATATATTAAGATCATGAAGATGAAGATGTTGGGTAGCCATATCTTTGGTATCTTCAC
TTGTAGAAGCAATATTATTAGGTCCATGCCAAATCCATTATTATACCAAGTCATTGCTTCTAGCTGCCCATCTCTTTTTCCTCGGCGTTATGGCAAACCAAGTAAAGAGG
AGGAGGGCGGCGGCGAGAAATCTAAGGCTGACCGAGCTCCGTCGACTGCGGAGGAGTTCAATAGAGTGGCGGCTGAAAAGGAGGCGGAGGAGAAGGAGGTGCATGATCAG
GGCGTCGCCAAAAAATCTGAAGCCATAGAAAAAAATAATGGCCCTAATGACGACATAAATAAAGGGCCTAATTACCGGCCTTGTAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAATAAAGAAAGCTCCAGGAGGCAGCCTAAGAGCAGGCCACGTAGATTATATATTAAGATCATGAAGATGAAGATGTTGGGTAGCCATATCTTTGGTATCTTCAC
TTGTAGAAGCAATATTATTAGGTCCATGCCAAATCCATTATTATACCAAGTCATTGCTTCTAGCTGCCCATCTCTTTTTCCTCGGCGTTATGGCAAACCAAGTAAAGAGG
AGGAGGGCGGCGGCGAGAAATCTAAGGCTGACCGAGCTCCGTCGACTGCGGAGGAGTTCAATAGAGTGGCGGCTGAAAAGGAGGCGGAGGAGAAGGAGGTGCATGATCAG
GGCGTCGCCAAAAAATCTGAAGCCATAGAAAAAAATAATGGCCCTAATGACGACATAAATAAAGGGCCTAATTACCGGCCTTGTAGCTGA
Protein sequenceShow/hide protein sequence
MANKESSRRQPKSRPRRLYIKIMKMKMLGSHIFGIFTCRSNIIRSMPNPLLYQVIASSCPSLFPRRYGKPSKEEEGGGEKSKADRAPSTAEEFNRVAAEKEAEEKEVHDQ
GVAKKSEAIEKNNGPNDDINKGPNYRPCS