; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G005840 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G005840
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCASP-like protein
Genome locationchr05:7273115..7275568
RNA-Seq ExpressionLsi05G005840
SyntenyLsi05G005840
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR006459 - Casparian strip membrane protein
IPR006702 - Casparian strip membrane protein domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149352.1 CASP-like protein 2D1 [Cucumis sativus]6.2e-7587.88Show/hide
Query:  PSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQVVAYLMVTSSAAVGE
        PS FK LD SLRL SVPF++AALWLTVTNRQDNPDYGNLEFHNLSGLKY+VCISAIAA YAFLAA VSCFRWF+V+AWVFFVSDQ+VAYLMV S AAVGE
Subjt:  PSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQVVAYLMVTSSAAVGE

Query:  ILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQ
        ILY+AYNGDREVSWSEACSSY KFCNNMKMAL+FQALGFACFF LA+ISAFRAFSVF PPLISSQ
Subjt:  ILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQ

XP_008463406.1 PREDICTED: CASP-like protein 2D1 [Cucumis melo]5.6e-7684.83Show/hide
Query:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV
        MAET+N        PS FK LD SLRL SVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKY+VCISAIAA YAFLAA VSCFRWF+V+AWVFFVSDQ+
Subjt:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV

Query:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISS
        VAYLMV S AAVGEILY+AYNGDREVSWSEACSSY KFCNNMKMAL+FQALGF CFFLLA+ISAFRAFSVF PPLISS
Subjt:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISS

XP_022942434.1 CASP-like protein 2D1 [Cucurbita moschata]1.8e-6174.01Show/hide
Query:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV
        M ET N       +P   KLLD+SLRLFSVP +IA++ LTVTNRQDNPDYG LEFHNLSGLKYMVCISAIAAAYA  AA  S  R F  KAWVFFVSDQ+
Subjt:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV

Query:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLIS
        VAYLMVTS AAVGEILYLAY GDREVSWSEA S+Y KFC+ MKMAL+FQALGF CFF++A++SAFRAFS+F PPL S
Subjt:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLIS

XP_022984776.1 CASP-like protein 2D1 [Cucurbita maxima]3.0e-6174.01Show/hide
Query:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV
        M ET NS      +P   KLLD+SLRL SVP +IA++ LTVTNRQDNPDYG LEFHNLSGLKYMVCISAIAAAYA  AA  S  R F  KAWVFFVSDQ+
Subjt:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV

Query:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLIS
        VAYLMVTS AAVGEILYLAY GDREVSWSEA S+Y KFC+ MKMAL+FQALGF CFF++A++SAFRAFS+F PPL S
Subjt:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLIS

XP_038903731.1 CASP-like protein 2D1 [Benincasa hispida]1.2e-7886.26Show/hide
Query:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV
        MAE +NSS          KL+D SLRL SVP SIAALWLTVTNRQDNPDYGNLEFHNLSGLKY+VCISAIAA YAFLAAVVSCFRWF+VKAWVFFVSDQ+
Subjt:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV

Query:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQQTN
        VAYLMVTS AAVGEILYLAYNGDREVSWSEACSSY KFCNNMKMAL+FQALGFACFF+LA+ISAFRAFSVFHPPLISSQQTN
Subjt:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQQTN

TrEMBL top hitse value%identityAlignment
A0A0A0L6A1 CASP-like protein3.0e-7587.88Show/hide
Query:  PSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQVVAYLMVTSSAAVGE
        PS FK LD SLRL SVPF++AALWLTVTNRQDNPDYGNLEFHNLSGLKY+VCISAIAA YAFLAA VSCFRWF+V+AWVFFVSDQ+VAYLMV S AAVGE
Subjt:  PSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQVVAYLMVTSSAAVGE

Query:  ILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQ
        ILY+AYNGDREVSWSEACSSY KFCNNMKMAL+FQALGFACFF LA+ISAFRAFSVF PPLISSQ
Subjt:  ILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQ

A0A1S3CJM6 CASP-like protein2.7e-7684.83Show/hide
Query:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV
        MAET+N        PS FK LD SLRL SVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKY+VCISAIAA YAFLAA VSCFRWF+V+AWVFFVSDQ+
Subjt:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV

Query:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISS
        VAYLMV S AAVGEILY+AYNGDREVSWSEACSSY KFCNNMKMAL+FQALGF CFFLLA+ISAFRAFSVF PPLISS
Subjt:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISS

A0A5D3BS29 CASP-like protein2.7e-7684.83Show/hide
Query:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV
        MAET+N        PS FK LD SLRL SVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKY+VCISAIAA YAFLAA VSCFRWF+V+AWVFFVSDQ+
Subjt:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV

Query:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISS
        VAYLMV S AAVGEILY+AYNGDREVSWSEACSSY KFCNNMKMAL+FQALGF CFFLLA+ISAFRAFSVF PPLISS
Subjt:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISS

A0A6J1FRA5 CASP-like protein8.5e-6274.01Show/hide
Query:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV
        M ET N       +P   KLLD+SLRLFSVP +IA++ LTVTNRQDNPDYG LEFHNLSGLKYMVCISAIAAAYA  AA  S  R F  KAWVFFVSDQ+
Subjt:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV

Query:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLIS
        VAYLMVTS AAVGEILYLAY GDREVSWSEA S+Y KFC+ MKMAL+FQALGF CFF++A++SAFRAFS+F PPL S
Subjt:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLIS

A0A6J1J679 CASP-like protein1.4e-6174.01Show/hide
Query:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV
        M ET NS      +P   KLLD+SLRL SVP +IA++ LTVTNRQDNPDYG LEFHNLSGLKYMVCISAIAAAYA  AA  S  R F  KAWVFFVSDQ+
Subjt:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV

Query:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLIS
        VAYLMVTS AAVGEILYLAY GDREVSWSEA S+Y KFC+ MKMAL+FQALGF CFF++A++SAFRAFS+F PPL S
Subjt:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLIS

SwissProt top hitse value%identityAlignment
A7P0P3 CASP-like protein 2D12.2e-5160.89Show/hide
Query:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV
        +AET  + IS+   P+  KL+D SLRL  +P S+A +WLTVTN+QDN  YG LEF NL+GLKYMVCIS I+A YA +A V S  R  V KAW+FFVSDQ+
Subjt:  MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQV

Query:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQ
        +AYLMVTS AAV EILYLAY GDR VSWSEACSSY +FC+ + +AL   AL   CF +LA+ISA+R FS+F PP+ S +
Subjt:  VAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQ

B9HTL5 CASP-like protein 2D15.3e-5365.22Show/hide
Query:  KLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQVVAYLMVTSSAAVGEILYL
        KLLD SLRL  +P S+A +WLTVTN+QDN  YG L++ +L+GLKYMV IS I A+YAF+AAV +  R  V K W+FFVSDQ+VAYLMVTS  AV EILYL
Subjt:  KLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQVVAYLMVTSSAAVGEILYL

Query:  AYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQ
        AYNGDREVSWSEAC+SY KFC  MK+A++  AL  +CF +LA+ISA+RAFS+F PPL+ S+
Subjt:  AYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQ

B9SV84 CASP-like protein 2D13.2e-5062.58Show/hide
Query:  KLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQVVAYLMVTSSAAVGEILYL
        KLLD SLR+  +P S A +WLTVTN QDN  YGNL++ N+ GLKYMVCISAI A+YAF+AAV    +  V K W+FFVSDQ++AYLMVTS AA  EILY+
Subjt:  KLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQVVAYLMVTSSAAVGEILYL

Query:  AYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQQT
        AYNGD++V+WSEAC+SY KFCN MK AL+  AL    F +LA+ISA+RAFS++ PP +SS++T
Subjt:  AYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQQT

C6T2J5 CASP-like protein 2D14.2e-5057.14Show/hide
Query:  NSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQVVAYLM
        ++S   H  P  +   D SLRL ++P S+A +W+TVTN++DN  YG L+++NLS LKYMV +SA+ A YA LAA  S  R FV KAW+FFVSDQ+VAYL 
Subjt:  NSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQVVAYLM

Query:  VTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQQ
        +TS AAV E+ YLAYNG +E SWSEACSSY  FC+ +K+AL+   + F CFF++A+ISAFRAFSVF PP ++SQ+
Subjt:  VTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQQ

Q9FFT2 CASP-like protein 2D14.4e-3950.28Show/hide
Query:  TSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQVVAY
        +S+S     Q P   K++D  LRL  VP S+A +WLTVTN + NPDYGNLE++++ GLKYMV +SAI+A YA L+ V S     V KAW+FF+ DQV+AY
Subjt:  TSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQVVAY

Query:  LMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQQTN
        +M TS A   EI+YL   GD+ V+WSE CSSY  +C+ + +AL         F  L++ISA+RAFS F PP  S  QTN
Subjt:  LMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQQTN

Arabidopsis top hitse value%identityAlignment
AT1G17200.1 Uncharacterised protein family (UPF0497)2.5e-2133.54Show/hide
Query:  LRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCF---RWFVVKAWVFFVSDQVVAYLMVTSSAAVGEILYLAYN
        LRL  V   +AAL + + + + N ++G++ + NL+  +Y+V  + I A Y+ L+A ++        + + W FF  DQ++ YL++ + A   E+LYLAYN
Subjt:  LRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCF---RWFVVKAWVFFVSDQVVAYLMVTSSAAVGEILYLAYN

Query:  GDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQQTN
        GD  ++WS+ACSSY  FC+    +++        + +L+LIS+++ F+ F PP I     N
Subjt:  GDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQQTN

AT1G17200.2 Uncharacterised protein family (UPF0497)6.5e-1432.81Show/hide
Query:  LSGLKYMVCISAIAAAYAFLAAVVSCF---RWFVVKAWVFFVSDQVVAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFA
        +S ++++  IS     Y+ L+A ++        + + W FF  DQ++ YL++ + A   E+LYLAYNGD  ++WS+ACSSY  FC+    +++       
Subjt:  LSGLKYMVCISAIAAAYAFLAAVVSCF---RWFVVKAWVFFVSDQVVAYLMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFA

Query:  CFFLLALISAFRAFSVFHPPLISSQQTN
         + +L+LIS+++ F+ F PP I     N
Subjt:  CFFLLALISAFRAFSVFHPPLISSQQTN

AT3G14380.1 Uncharacterised protein family (UPF0497)8.2e-1732.7Show/hide
Query:  KLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAV-VSCFRWFVVKAWV--FFVSDQVVAYLMVTSSAAVGEI
        K  +  LR+ S+  SI  L + + N   N ++G++ + N+    Y+V  + + AAY+ L+A+ +      + K  V   F+ DQVV Y+++ + A   E 
Subjt:  KLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAV-VSCFRWFVVKAWV--FFVSDQVVAYLMVTSSAAVGEI

Query:  LYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPP
        +YLAY G+  ++WS AC SY  FC+N  ++++F  +    + LL+LIS++R F+ F  P
Subjt:  LYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPP

AT4G16442.1 Uncharacterised protein family (UPF0497)3.3e-1029.45Show/hide
Query:  KLLDLSLRLFSVPFSIAALWLTVTNRQDNPDY---GNLEFHNLSGLKYMVCISAIAAAYAFLAA---VVSCFRWFVV----KAWVFFVSDQVVAYLMVTS
        +L +L LR     F++ AL L VT+ +    +      ++ ++  + ++V  + IAA Y+ L +   VV   +  V+     AW FF  DQ +AYL V +
Subjt:  KLLDLSLRLFSVPFSIAALWLTVTNRQDNPDY---GNLEFHNLSGLKYMVCISAIAAAYAFLAA---VVSCFRWFVV----KAWVFFVSDQVVAYLMVTS

Query:  SAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVF
         AA  E   +A  G+ ++ W   C+ Y KFCN M + +    L       ++ ISAF  F ++
Subjt:  SAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVF

AT5G54980.1 Uncharacterised protein family (UPF0497)3.1e-4050.28Show/hide
Query:  TSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQVVAY
        +S+S     Q P   K++D  LRL  VP S+A +WLTVTN + NPDYGNLE++++ GLKYMV +SAI+A YA L+ V S     V KAW+FF+ DQV+AY
Subjt:  TSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQVVAY

Query:  LMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQQTN
        +M TS A   EI+YL   GD+ V+WSE CSSY  +C+ + +AL         F  L++ISA+RAFS F PP  S  QTN
Subjt:  LMVTSSAAVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQQTN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAACCAGCAATTCTTCCATTTCCACCCACCAATATCCTTCATTCTTCAAACTTCTTGACCTCTCTTTAAGACTATTCTCTGTTCCTTTCAGTATCGCAGCTCT
GTGGCTCACTGTCACCAACCGACAAGACAACCCAGATTACGGCAACCTAGAATTTCACAATCTCAGCGGTCTCAAGTATATGGTCTGCATATCCGCCATCGCCGCCGCCT
ACGCTTTTCTCGCCGCCGTTGTTTCTTGCTTCCGGTGGTTCGTAGTCAAGGCTTGGGTCTTCTTCGTTTCCGATCAGGTGGTGGCTTATTTGATGGTGACATCGAGTGCG
GCGGTAGGGGAGATATTATACTTAGCTTACAATGGAGATAGAGAAGTTTCATGGAGTGAAGCTTGTAGTTCATATGCCAAATTCTGCAACAATATGAAAATGGCTCTTCT
TTTTCAAGCTTTAGGATTTGCTTGTTTCTTTCTCTTGGCTCTCATCTCTGCTTTTAGAGCTTTTAGTGTCTTTCACCCTCCTCTAATTTCTTCTCAACAAACCAATTAG
mRNA sequenceShow/hide mRNA sequence
AAAAAGAAGAGCCCACTAATCCACTAATCCACTAATCCACTCCTCACTCCATAAAAGGGAAAAAGAGTTGAAAATAATAATTTCTCAACTTTCATTTCACACTTAAAAAA
TTTATTTATCTCTCCTCGTCAAATCCCCTTATATTTACATCCCCTTCTTCAGCAAAACCATCAAAATTTAGCTTCAAAGTTTTCAGAAAATCATTAAAAATGGCAGAAAC
CAGCAATTCTTCCATTTCCACCCACCAATATCCTTCATTCTTCAAACTTCTTGACCTCTCTTTAAGACTATTCTCTGTTCCTTTCAGTATCGCAGCTCTGTGGCTCACTG
TCACCAACCGACAAGACAACCCAGATTACGGCAACCTAGAATTTCACAATCTCAGCGGTCTCAAGTATATGGTCTGCATATCCGCCATCGCCGCCGCCTACGCTTTTCTC
GCCGCCGTTGTTTCTTGCTTCCGGTGGTTCGTAGTCAAGGCTTGGGTCTTCTTCGTTTCCGATCAGGTGGTGGCTTATTTGATGGTGACATCGAGTGCGGCGGTAGGGGA
GATATTATACTTAGCTTACAATGGAGATAGAGAAGTTTCATGGAGTGAAGCTTGTAGTTCATATGCCAAATTCTGCAACAATATGAAAATGGCTCTTCTTTTTCAAGCTT
TAGGATTTGCTTGTTTCTTTCTCTTGGCTCTCATCTCTGCTTTTAGAGCTTTTAGTGTCTTTCACCCTCCTCTAATTTCTTCTCAACAAACCAATTAGATTTTCATTATT
ACCATTAATTTTTCTAATTTTAATGCCTTCATTTCCTAAATTATTTTCCAAAGGACTTTATAGGATTCAATTCATCAATCTATTTTTGTTCTTGGCTTTTTATTTAATTT
AATTTCTGCAGGCTTAAACATTTTTCTACTTTAATTATTCTTAATTTGTCGGTTTTGGATTGGATGTAATAATGATGTGACATTTTAAAATTACTTTTAGTATATGGTTG
AGAAAAAATGAGTTTAATAATTT
Protein sequenceShow/hide protein sequence
MAETSNSSISTHQYPSFFKLLDLSLRLFSVPFSIAALWLTVTNRQDNPDYGNLEFHNLSGLKYMVCISAIAAAYAFLAAVVSCFRWFVVKAWVFFVSDQVVAYLMVTSSA
AVGEILYLAYNGDREVSWSEACSSYAKFCNNMKMALLFQALGFACFFLLALISAFRAFSVFHPPLISSQQTN