; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G005870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G005870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF4228 domain protein
Genome locationchr05:7316494..7318387
RNA-Seq ExpressionLsi05G005870
SyntenyLsi05G005870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650133.1 hypothetical protein Csa_011778 [Cucumis sativus]6.1e-3379.8Show/hide
Query:  MGNCTSNKYLADT-MPMSDEDEEAVETVRRRLIADDGAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSLQ
        MGNCTSNKYLA+T +PMSD+DEE  E +RRRL+  +GAQK SASTT ELKIRITKRELEKLL KVDVEELPV ELLS+LIDVGD FESTH+RSW+PSLQ
Subjt:  MGNCTSNKYLADT-MPMSDEDEEAVETVRRRLIADDGAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSLQ

KAG6577418.1 hypothetical protein SDJN03_24992, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3375.73Show/hide
Query:  MGNCTSNKYLADTMPMSDEDEEAVETVRRRLIADDGAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSLQSI
        MGNCTSNKYLA+TMPMS E+EE VETV+R+L ADDGA + + +TT E+KIR+TKRELEKLLSKV+VEELPV ELL Q+I+VGD  ESTHRRSW+PSLQSI
Subjt:  MGNCTSNKYLADTMPMSDEDEEAVETVRRRLIADDGAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSLQSI

Query:  PEV
        PE+
Subjt:  PEV

XP_008463409.1 PREDICTED: uncharacterized protein LOC103501580 [Cucumis melo]6.3e-3881.73Show/hide
Query:  MGNCTSNKYLADTMPMSDEDEEAVETVRRRLIADDGAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSLQSI
        MGNCTSNKYLA+TMPMSD++EE  E +RRRL+ +  AQK SASTT ELKIRITK+ELEKLL KVD+EELPV ELLS+LIDVGDAFESTHRRSWQPSLQSI
Subjt:  MGNCTSNKYLADTMPMSDEDEEAVETVRRRLIADDGAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSLQSI

Query:  PEVN
        PEVN
Subjt:  PEVN

XP_031739098.1 uncharacterized protein LOC116402843 [Cucumis sativus]1.5e-3680.95Show/hide
Query:  MGNCTSNKYLADT-MPMSDEDEEAVETVRRRLIADDGAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSLQS
        MGNCTSNKYLA+T +PMSD+DEE  E +RRRL+  +GAQK SASTT ELKIRITKRELEKLL KVDVEELPV ELLS+LIDVGD FESTH+RSW+PSLQS
Subjt:  MGNCTSNKYLADT-MPMSDEDEEAVETVRRRLIADDGAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSLQS

Query:  IPEVN
        IPEVN
Subjt:  IPEVN

XP_038904231.1 uncharacterized protein LOC120090574 [Benincasa hispida]3.2e-4289.42Show/hide
Query:  MGNCTSNKYLADTMPMSDEDEEAVETVRRRLIADDGAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSLQSI
        MGNCTSNKYLA+TMPMSDEDEEAVETVRRRL+  DGA+K SA+TT ELKIRITKRELEKLLSKVDVEELPV ELLSQLIDVGDAFESTH+RSW+PSLQSI
Subjt:  MGNCTSNKYLADTMPMSDEDEEAVETVRRRLIADDGAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSLQSI

Query:  PEVN
        PEVN
Subjt:  PEVN

TrEMBL top hitse value%identityAlignment
A0A0A0L2D8 Uncharacterized protein7.5e-3780.95Show/hide
Query:  MGNCTSNKYLADT-MPMSDEDEEAVETVRRRLIADDGAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSLQS
        MGNCTSNKYLA+T +PMSD+DEE  E +RRRL+  +GAQK SASTT ELKIRITKRELEKLL KVDVEELPV ELLS+LIDVGD FESTH+RSW+PSLQS
Subjt:  MGNCTSNKYLADT-MPMSDEDEEAVETVRRRLIADDGAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSLQS

Query:  IPEVN
        IPEVN
Subjt:  IPEVN

A0A1S3CJ77 uncharacterized protein LOC1035015803.0e-3881.73Show/hide
Query:  MGNCTSNKYLADTMPMSDEDEEAVETVRRRLIADDGAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSLQSI
        MGNCTSNKYLA+TMPMSD++EE  E +RRRL+ +  AQK SASTT ELKIRITK+ELEKLL KVD+EELPV ELLS+LIDVGDAFESTHRRSWQPSLQSI
Subjt:  MGNCTSNKYLADTMPMSDEDEEAVETVRRRLIADDGAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSLQSI

Query:  PEVN
        PEVN
Subjt:  PEVN

A0A5D3BTQ9 DUF4228 domain protein3.0e-3881.73Show/hide
Query:  MGNCTSNKYLADTMPMSDEDEEAVETVRRRLIADDGAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSLQSI
        MGNCTSNKYLA+TMPMSD++EE  E +RRRL+ +  AQK SASTT ELKIRITK+ELEKLL KVD+EELPV ELLS+LIDVGDAFESTHRRSWQPSLQSI
Subjt:  MGNCTSNKYLADTMPMSDEDEEAVETVRRRLIADDGAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSLQSI

Query:  PEVN
        PEVN
Subjt:  PEVN

A0A6J1DBT0 uncharacterized protein LOC1110190481.5e-3277.78Show/hide
Query:  MGNCTSNKYLADTMPMSDEDEEAVETVRRRLIADD---GAQKSSA-STTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPS
        MGNCTSNKY A+  PMSDE EEAVETV+RRLI DD   GA +SS+ + T E+KIRITKRELEKLL KVDVEELPV ELLSQLIDVGDAFESTHRRSW+PS
Subjt:  MGNCTSNKYLADTMPMSDEDEEAVETVRRRLIADD---GAQKSSA-STTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPS

Query:  LQSIPEVN
        LQ+I E+N
Subjt:  LQSIPEVN

A0A6J1J7P7 uncharacterized protein LOC1114833151.1e-3275.47Show/hide
Query:  MGNCTSNKYLADTMPMSDEDEEAVETVRRRLIADDGAQKSS---ASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSL
        MGNCTSNKYLA+TMPMS E+EE VET++R+L ADDGA +SS    +TT E+KIR+TKRELEKLLSKV+VEELPV ELL QLI+VGD  ESTHRRSW+PSL
Subjt:  MGNCTSNKYLADTMPMSDEDEEAVETVRRRLIADDGAQKSS---ASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSL

Query:  QSIPEV
        QSIPE+
Subjt:  QSIPEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G20340.1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.6.7e-0640.91Show/hide
Query:  SASTTMELKIRITKRELEKLLSKVDVEELPVRE--LLSQLIDVGDAFESTHRRSWQPSLQSIPEVN
        S+  + E+KIR+TK++L  LLSKV+V +L  ++      +++     E+  +R W+P LQSIPEVN
Subjt:  SASTTMELKIRITKRELEKLLSKVDVEELPVRE--LLSQLIDVGDAFESTHRRSWQPSLQSIPEVN

AT4G21920.1 unknown protein2.7e-0732.56Show/hide
Query:  MGNCTSNKYLADTMPMSDEDEEAVETVRRR---LIADD---------------GAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLI-DV
        MGNC        T    D++    +  RRR   ++ DD                   SS+S   E+KIRITK+ELE L+  + ++ L   E+LS+LI + 
Subjt:  MGNCTSNKYLADTMPMSDEDEEAVETVRRR---LIADD---------------GAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLI-DV

Query:  GDAF------ESTHRRSWQPSLQSIPEVN
        GD         + H + W+P LQSIPE++
Subjt:  GDAF------ESTHRRSWQPSLQSIPEVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAATATCAACACCATGGGAAATTGTACGAGCAACAAATATTTGGCCGACACAATGCCGATGAGCGATGAGGACGAGGAAGCGGTGGAGACAGTGAGGAGGAGGCT
GATTGCCGATGACGGAGCTCAAAAATCTTCGGCAAGTACCACGATGGAGCTGAAGATTAGGATCACAAAGAGAGAGCTGGAGAAGTTATTGAGCAAAGTGGATGTGGAAG
AGCTGCCAGTGAGGGAGCTGTTATCGCAGTTAATAGACGTCGGGGATGCGTTCGAGAGTACTCACCGGCGATCATGGCAGCCTTCTTTGCAAAGCATTCCTGAGGTGAAT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGCATAATATCAACACCATGGGAAATTGTACGAGCAACAAATATTTGGCCGACACAATGCCGATGAGCGATGAGGACGAGGAAGCGGTGGAGACAGTGAGGAGGAGGCT
GATTGCCGATGACGGAGCTCAAAAATCTTCGGCAAGTACCACGATGGAGCTGAAGATTAGGATCACAAAGAGAGAGCTGGAGAAGTTATTGAGCAAAGTGGATGTGGAAG
AGCTGCCAGTGAGGGAGCTGTTATCGCAGTTAATAGACGTCGGGGATGCGTTCGAGAGTACTCACCGGCGATCATGGCAGCCTTCTTTGCAAAGCATTCCTGAGGTGAAT
TGA
Protein sequenceShow/hide protein sequence
MHNINTMGNCTSNKYLADTMPMSDEDEEAVETVRRRLIADDGAQKSSASTTMELKIRITKRELEKLLSKVDVEELPVRELLSQLIDVGDAFESTHRRSWQPSLQSIPEVN