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Lsi05G005880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G005880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF4228 domain protein
Genome locationchr05:7324964..7325287
RNA-Seq ExpressionLsi05G005880
SyntenyLsi05G005880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600784.1 hypothetical protein SDJN03_06017, partial [Cucurbita argyrosperma subsp. sororia]2.6e-3678.5Show/hide
Query:  MGNCVSSKFFCGKSSRISDEEALEMVKRSLMAYDEAPRSSVAATGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDIDDSLEMQPRSWRPSL
        MGNCVS+K FCGKSSRISDEEALEMVKRSLMAYDEAP +SV AT TE+KIKITKRELE LL NY VVEV+EEL   Q LS L  +D +LEMQPRSW+PSL
Subjt:  MGNCVSSKFFCGKSSRISDEEALEMVKRSLMAYDEAPRSSVAATGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDIDDSLEMQPRSWRPSL

Query:  QSIPETD
        QSIPE D
Subjt:  QSIPETD

XP_011652736.1 uncharacterized protein LOC105435072 [Cucumis sativus]2.6e-3371.93Show/hide
Query:  MGNCVSSKFFCGKSSRI-SDEEALEMVKRSLMAYDEAPRSSVAATGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLS------RLIDIDDSLEMQP
        MGNCVSS   CGK +RI SDEEALEM+KR +MAYDE PRSS AAT TEVKIKITK+ELE LLGNY VVEV++ELP+  F S      + IDIDD+ EMQP
Subjt:  MGNCVSSKFFCGKSSRI-SDEEALEMVKRSLMAYDEAPRSSVAATGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLS------RLIDIDDSLEMQP

Query:  RSWRPSLQSIPETD
        RSWRPSLQSIPE D
Subjt:  RSWRPSLQSIPETD

XP_016903026.1 PREDICTED: uncharacterized protein LOC103501581 [Cucumis melo]2.7e-3877.78Show/hide
Query:  MGNCVSSKFFCGKSSRISDEEALEMVKRSLMAY-------DEAPRSSVAA---TGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDIDDSLE
        MGNCVSSK+ CGKS+RISDEEALEM+KR++MAY       DE PRSSVAA   T TEVKIKITKRELE LLGNYKVVEV+EEL   QFLSRLIDID+ +E
Subjt:  MGNCVSSKFFCGKSSRISDEEALEMVKRSLMAY-------DEAPRSSVAA---TGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDIDDSLE

Query:  MQPRSWRPSLQSIPETD
        MQPRSWRPSLQSIPETD
Subjt:  MQPRSWRPSLQSIPETD

XP_022151029.1 uncharacterized protein LOC111019048 [Momordica charantia]1.6e-1453.21Show/hide
Query:  MGNCVSSKFFCGKSSRISDEEALEMVKRSLMAYDE---APRSSVAATGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDIDDSLE-MQPRSW
        MGNC S+K+    S    +EEA+E VKR L+  D+   A RSS  A  TEVKI+ITKRELEKLL    V    EELP  + LS+LID+ D+ E    RSW
Subjt:  MGNCVSSKFFCGKSSRISDEEALEMVKRSLMAYDE---APRSSVAATGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDIDDSLE-MQPRSW

Query:  RPSLQSIPE
        RPSLQ+I E
Subjt:  RPSLQSIPE

XP_038904231.1 uncharacterized protein LOC120090574 [Benincasa hispida]4.2e-1552.29Show/hide
Query:  MGNCVSSKFFCGKSSRI-SDEEALEMVKRSLMAYDEAPRSSVAATGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDIDDSLE-MQPRSWRP
        MGNC S+K+          DEEA+E V+R L+ +D A + S A T TE+KI+ITKRELEKLL    V    EELP  + LS+LID+ D+ E    RSWRP
Subjt:  MGNCVSSKFFCGKSSRI-SDEEALEMVKRSLMAYDEAPRSSVAATGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDIDDSLE-MQPRSWRP

Query:  SLQSIPETD
        SLQSIPE +
Subjt:  SLQSIPETD

TrEMBL top hitse value%identityAlignment
A0A0A0L7M3 Uncharacterized protein1.3e-3371.93Show/hide
Query:  MGNCVSSKFFCGKSSRI-SDEEALEMVKRSLMAYDEAPRSSVAATGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLS------RLIDIDDSLEMQP
        MGNCVSS   CGK +RI SDEEALEM+KR +MAYDE PRSS AAT TEVKIKITK+ELE LLGNY VVEV++ELP+  F S      + IDIDD+ EMQP
Subjt:  MGNCVSSKFFCGKSSRI-SDEEALEMVKRSLMAYDEAPRSSVAATGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLS------RLIDIDDSLEMQP

Query:  RSWRPSLQSIPETD
        RSWRPSLQSIPE D
Subjt:  RSWRPSLQSIPETD

A0A1S4E465 uncharacterized protein LOC1035015811.3e-3877.78Show/hide
Query:  MGNCVSSKFFCGKSSRISDEEALEMVKRSLMAY-------DEAPRSSVAA---TGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDIDDSLE
        MGNCVSSK+ CGKS+RISDEEALEM+KR++MAY       DE PRSSVAA   T TEVKIKITKRELE LLGNYKVVEV+EEL   QFLSRLIDID+ +E
Subjt:  MGNCVSSKFFCGKSSRISDEEALEMVKRSLMAY-------DEAPRSSVAA---TGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDIDDSLE

Query:  MQPRSWRPSLQSIPETD
        MQPRSWRPSLQSIPETD
Subjt:  MQPRSWRPSLQSIPETD

A0A5D3BTP7 DUF4228 domain protein1.3e-3877.78Show/hide
Query:  MGNCVSSKFFCGKSSRISDEEALEMVKRSLMAY-------DEAPRSSVAA---TGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDIDDSLE
        MGNCVSSK+ CGKS+RISDEEALEM+KR++MAY       DE PRSSVAA   T TEVKIKITKRELE LLGNYKVVEV+EEL   QFLSRLIDID+ +E
Subjt:  MGNCVSSKFFCGKSSRISDEEALEMVKRSLMAY-------DEAPRSSVAA---TGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDIDDSLE

Query:  MQPRSWRPSLQSIPETD
        MQPRSWRPSLQSIPETD
Subjt:  MQPRSWRPSLQSIPETD

A0A6J1DBT0 uncharacterized protein LOC1110190487.8e-1553.21Show/hide
Query:  MGNCVSSKFFCGKSSRISDEEALEMVKRSLMAYDE---APRSSVAATGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDIDDSLE-MQPRSW
        MGNC S+K+    S    +EEA+E VKR L+  D+   A RSS  A  TEVKI+ITKRELEKLL    V    EELP  + LS+LID+ D+ E    RSW
Subjt:  MGNCVSSKFFCGKSSRISDEEALEMVKRSLMAYDE---APRSSVAATGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDIDDSLE-MQPRSW

Query:  RPSLQSIPE
        RPSLQ+I E
Subjt:  RPSLQSIPE

A0A6J1J7P7 uncharacterized protein LOC1114833151.0e-1450.93Show/hide
Query:  MGNCVSSKFFCGKSSRISDEEALEMVKRSLMAYDEAPRSS--VAATGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDI-DDSLEMQPRSWR
        MGNC S+K+         +EE +E +KR L A D A RSS     T TEVKI++TKRELEKLL   +V    EELP  + L +LI++ D+S     RSWR
Subjt:  MGNCVSSKFFCGKSSRISDEEALEMVKRSLMAYDEAPRSS--VAATGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDI-DDSLEMQPRSWR

Query:  PSLQSIPE
        PSLQSIPE
Subjt:  PSLQSIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G10120.1 unknown protein6.1e-0445Show/hide
Query:  VKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDIDDSLEMQPRSWRPSLQSIPETD
        VK+ ++K+ELEKLL    V E+     A Q L      DD  E     WRP L SIPETD
Subjt:  VKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDIDDSLEMQPRSWRPSLQSIPETD

AT4G21920.1 unknown protein2.7e-0439.24Show/hide
Query:  SSVAATGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLI----------DIDDSLEMQPRSWRPSLQSIPETD
        SS ++   E+KI+ITK+ELE L+ N  +    + L A + LS+LI           +D +   QP  W+P LQSIPE D
Subjt:  SSVAATGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLI----------DIDDSLEMQPRSWRPSLQSIPETD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACTGTGTGAGCAGCAAATTTTTCTGTGGGAAATCATCGAGAATTAGCGATGAGGAGGCTCTGGAGATGGTGAAGAGAAGCCTTATGGCTTACGATGAAGCCCC
GAGATCTTCGGTAGCCGCGACAGGGACGGAGGTGAAGATCAAAATCACAAAGAGGGAGCTAGAGAAATTACTAGGTAACTATAAGGTGGTGGAGGTGGAGGAGGAGCTGC
CTGCAGGGCAGTTCCTATCGCGGCTGATCGACATCGATGATTCGCTCGAGATGCAGCCGCGATCTTGGCGGCCTTCCCTGCAGAGCATACCGGAAACGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAACTGTGTGAGCAGCAAATTTTTCTGTGGGAAATCATCGAGAATTAGCGATGAGGAGGCTCTGGAGATGGTGAAGAGAAGCCTTATGGCTTACGATGAAGCCCC
GAGATCTTCGGTAGCCGCGACAGGGACGGAGGTGAAGATCAAAATCACAAAGAGGGAGCTAGAGAAATTACTAGGTAACTATAAGGTGGTGGAGGTGGAGGAGGAGCTGC
CTGCAGGGCAGTTCCTATCGCGGCTGATCGACATCGATGATTCGCTCGAGATGCAGCCGCGATCTTGGCGGCCTTCCCTGCAGAGCATACCGGAAACGGATTGA
Protein sequenceShow/hide protein sequence
MGNCVSSKFFCGKSSRISDEEALEMVKRSLMAYDEAPRSSVAATGTEVKIKITKRELEKLLGNYKVVEVEEELPAGQFLSRLIDIDDSLEMQPRSWRPSLQSIPETD