; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G005890 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G005890
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description2-iminobutanoate/2-iminopropanoate deaminase-like
Genome locationchr05:7326972..7331229
RNA-Seq ExpressionLsi05G005890
SyntenyLsi05G005890
Gene Ontology termsGO:1901565 - organonitrogen compound catabolic process (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0019239 - deaminase activity (molecular function)
InterPro domainsIPR006056 - RidA family
IPR006175 - YjgF/YER057c/UK114 family
IPR019897 - RidA, conserved site
IPR035959 - RutC-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN56122.1 hypothetical protein Csa_010346 [Cucumis sativus]5.0e-6977.54Show/hide
Query:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRRAS-SIPSISTRQRPFKCLAISKCT-------TDQAPEALGPYSQGIKANNVIYVSGSLGLIPET
        MA SAA + QI ASTAI+R+RS+TPS  TAVSLWRR S +IPSIS+RQ  FKC AISKCT       TD APEALGPYSQGI ANN++YVSGSLGLIPET
Subjt:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRRAS-SIPSISTRQRPFKCLAISKCT-------TDQAPEALGPYSQGIKANNVIYVSGSLGLIPET

Query:  GELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI
        G+LISDD+ +QTEQALKNVGAILRAGGADYDRV+KTTIMLANV DF LVNEIY KYF + PAPARSTF AGALP+NAKIEIDAIAV+
Subjt:  GELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI

NP_001267661.1 chordin [Cucumis sativus]1.0e-6978.07Show/hide
Query:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRRAS-SIPSISTRQRPFKCLAISKCT-------TDQAPEALGPYSQGIKANNVIYVSGSLGLIPET
        MA SAA + QI ASTAI+R+RS+TPS GTAVSLWRR S +IPSIS+ Q  FKC AISKCT       TD APEALGPYSQGI ANN++YVSGSLGLIPET
Subjt:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRRAS-SIPSISTRQRPFKCLAISKCT-------TDQAPEALGPYSQGIKANNVIYVSGSLGLIPET

Query:  GELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI
        G+LISDD+ +QTEQALKNVGAILRAGGADYDRV+KTTIMLANV DF LVNEIY KYF +SPAPARSTF AGALP+NAKIEIDAIAV+
Subjt:  GELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI

XP_008463411.1 PREDICTED: ribonuclease UK114-like [Cucumis melo]1.6e-7079.68Show/hide
Query:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRR-ASSIPSISTRQRPFKCLAISKCT-------TDQAPEALGPYSQGIKANNVIYVSGSLGLIPET
        MA SAA + QI ASTAI+R RS TPS GTAVSLWRR   +IPSIS+RQ  FKCLAISKCT       TD APEALGPYSQGI ANN++YVSGSLGLIP+T
Subjt:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRR-ASSIPSISTRQRPFKCLAISKCT-------TDQAPEALGPYSQGIKANNVIYVSGSLGLIPET

Query:  GELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI
        GELISDD+ +QTEQALKNVGAILRAGGADYDRVVKTTIMLANV DF LVNEIYAKYF +SPAPARSTF AGALP+NAKIEIDAIAV+
Subjt:  GELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI

XP_023552960.1 2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita pepo subsp. pepo]1.2e-6776.22Show/hide
Query:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRRASSIPSISTRQRPFKCLAISKC------TTDQAPEALGPYSQGIKANNVIYVSGSLGLIPETGE
        MA+  A +FQI AS  ISR R++TPSVG AVSLWRR SSIPSIS R   FKC AIS+C       T++APEALGPYSQGI ANN I+VSGSLGLIPETGE
Subjt:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRRASSIPSISTRQRPFKCLAISKC------TTDQAPEALGPYSQGIKANNVIYVSGSLGLIPETGE

Query:  LISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI
        LISD + DQTEQALKN+GAIL+AGG DY+RVVKTTIMLA+V DFALVNEIYAKYFS  PAPARSTFQAGALP+NAKIEIDAIAV+
Subjt:  LISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI

XP_038905772.1 LOW QUALITY PROTEIN: 2-iminobutanoate/2-iminopropanoate deaminase-like, partial [Benincasa hispida]3.8e-6979.46Show/hide
Query:  AWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRRASSIPSISTRQRPFKCLAISKCTTD-------QAPEALGPYSQGIKANNVIYVSGSLGLIPETGE
        A SAA +FQI AS  ISR+RS+TPSVGTAV L  R SSIPSIS RQ  FKC AISK  TD       +APEALGPYS+GI ANNV+YVSGSLGL+PETGE
Subjt:  AWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRRASSIPSISTRQRPFKCLAISKCTTD-------QAPEALGPYSQGIKANNVIYVSGSLGLIPETGE

Query:  LISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI
        LISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLAN+ DF LVN+IYAKYF HSPAP+RSTFQAGALP+NAKI+IDAIAVI
Subjt:  LISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI

TrEMBL top hitse value%identityAlignment
A0A0A0L6A5 Plastid-lipid associated protein2.4e-6977.54Show/hide
Query:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRRAS-SIPSISTRQRPFKCLAISKCT-------TDQAPEALGPYSQGIKANNVIYVSGSLGLIPET
        MA SAA + QI ASTAI+R+RS+TPS  TAVSLWRR S +IPSIS+RQ  FKC AISKCT       TD APEALGPYSQGI ANN++YVSGSLGLIPET
Subjt:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRRAS-SIPSISTRQRPFKCLAISKCT-------TDQAPEALGPYSQGIKANNVIYVSGSLGLIPET

Query:  GELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI
        G+LISDD+ +QTEQALKNVGAILRAGGADYDRV+KTTIMLANV DF LVNEIY KYF + PAPARSTF AGALP+NAKIEIDAIAV+
Subjt:  GELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI

A0A1S3CJ80 ribonuclease UK114-like7.5e-7179.68Show/hide
Query:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRR-ASSIPSISTRQRPFKCLAISKCT-------TDQAPEALGPYSQGIKANNVIYVSGSLGLIPET
        MA SAA + QI ASTAI+R RS TPS GTAVSLWRR   +IPSIS+RQ  FKCLAISKCT       TD APEALGPYSQGI ANN++YVSGSLGLIP+T
Subjt:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRR-ASSIPSISTRQRPFKCLAISKCT-------TDQAPEALGPYSQGIKANNVIYVSGSLGLIPET

Query:  GELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI
        GELISDD+ +QTEQALKNVGAILRAGGADYDRVVKTTIMLANV DF LVNEIYAKYF +SPAPARSTF AGALP+NAKIEIDAIAV+
Subjt:  GELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI

A0A5D3BWQ5 Ribonuclease UK114-like protein7.5e-7179.68Show/hide
Query:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRR-ASSIPSISTRQRPFKCLAISKCT-------TDQAPEALGPYSQGIKANNVIYVSGSLGLIPET
        MA SAA + QI ASTAI+R RS TPS GTAVSLWRR   +IPSIS+RQ  FKCLAISKCT       TD APEALGPYSQGI ANN++YVSGSLGLIP+T
Subjt:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRR-ASSIPSISTRQRPFKCLAISKCT-------TDQAPEALGPYSQGIKANNVIYVSGSLGLIPET

Query:  GELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI
        GELISDD+ +QTEQALKNVGAILRAGGADYDRVVKTTIMLANV DF LVNEIYAKYF +SPAPARSTF AGALP+NAKIEIDAIAV+
Subjt:  GELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI

A0A6J1JD57 2-iminobutanoate/2-iminopropanoate deaminase-like6.6e-6775.14Show/hide
Query:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRRASSIPSISTRQRPFKCLAISKC------TTDQAPEALGPYSQGIKANNVIYVSGSLGLIPETGE
        MA+  A +FQI AS  ISR R++TPSVG AVSLWRR SSIPSIS R   FKC AISKC       T++APEALGPYSQGI ANN I+VSGSLGLIPETGE
Subjt:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRRASSIPSISTRQRPFKCLAISKC------TTDQAPEALGPYSQGIKANNVIYVSGSLGLIPETGE

Query:  LISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI
        LISD + +Q EQALKN+GAIL+AGGADY+RVVKTTIMLA+V DFALVN+IYA+YFS  PAPARSTFQAGALP+NAKIEIDAIAV+
Subjt:  LISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI

A0RZC7 Plastid-lipid associated protein4.9e-7078.07Show/hide
Query:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRRAS-SIPSISTRQRPFKCLAISKCT-------TDQAPEALGPYSQGIKANNVIYVSGSLGLIPET
        MA SAA + QI ASTAI+R+RS+TPS GTAVSLWRR S +IPSIS+ Q  FKC AISKCT       TD APEALGPYSQGI ANN++YVSGSLGLIPET
Subjt:  MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRRAS-SIPSISTRQRPFKCLAISKCT-------TDQAPEALGPYSQGIKANNVIYVSGSLGLIPET

Query:  GELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI
        G+LISDD+ +QTEQALKNVGAILRAGGADYDRV+KTTIMLANV DF LVNEIY KYF +SPAPARSTF AGALP+NAKIEIDAIAV+
Subjt:  GELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI

SwissProt top hitse value%identityAlignment
P52758 2-iminobutanoate/2-iminopropanoate deaminase1.4e-2949.17Show/hide
Query:  TTDQAPEALGPYSQGIKANNVIYVSGSLGLIPETGELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARS
        +T +AP A+GPYSQ +  +  IY+SG +G+ P +G+L+S  +A++ +QALKN+G IL+A G D+  VVKTT++LA++ DF  VNEIY +YF  S  PAR+
Subjt:  TTDQAPEALGPYSQGIKANNVIYVSGSLGLIPETGELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARS

Query:  TFQAGALPRNAKIEIDAIAV
         +Q  ALP+ ++IEI+A+A+
Subjt:  TFQAGALPRNAKIEIDAIAV

P52759 2-iminobutanoate/2-iminopropanoate deaminase1.5e-2849.17Show/hide
Query:  TTDQAPEALGPYSQGIKANNVIYVSGSLGLIPETGELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARS
        +T +AP A+G YSQ +  +  IYVSG +G+ P +G+L+   +A++ +QALKN+G IL+A G D+  VVKTT++LA++ DF  VNEIY  YF  +  PAR+
Subjt:  TTDQAPEALGPYSQGIKANNVIYVSGSLGLIPETGELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARS

Query:  TFQAGALPRNAKIEIDAIAV
         +Q  ALP+ ++IEI+AIAV
Subjt:  TFQAGALPRNAKIEIDAIAV

P52760 2-iminobutanoate/2-iminopropanoate deaminase8.1e-3050Show/hide
Query:  TTDQAPEALGPYSQGIKANNVIYVSGSLGLIPETGELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARS
        +T +AP A+GPYSQ ++ +  IY+SG +GL P +G+L+   + ++ +QALKN+G IL+A G D++ VVKTT++LA++ DF  VNEIY  YF  S  PAR+
Subjt:  TTDQAPEALGPYSQGIKANNVIYVSGSLGLIPETGELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARS

Query:  TFQAGALPRNAKIEIDAIAV
         +Q  ALPR +++EI+AIAV
Subjt:  TFQAGALPRNAKIEIDAIAV

Q10121 RutC family protein C23G10.21.1e-3155.17Show/hide
Query:  APEALGPYSQGIKANNVIYVSGSLGLIPETGELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQA
        AP A+GPYSQ ++A N IY+SGSLGL P+TG+L  + + +QT Q+LKN+G +L+A GADY  VVKTT++L N+ DFA VNE+Y +YF  SP PAR+ +Q 
Subjt:  APEALGPYSQGIKANNVIYVSGSLGLIPETGELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQA

Query:  GALPRNAKIEIDAIAV
         ALP+   +EI+A+A+
Subjt:  GALPRNAKIEIDAIAV

Q94JQ4 Reactive Intermediate Deaminase A, chloroplastic2.7e-4152.63Show/hide
Query:  MAWSAAQSFQ---ILASTAISRQRSLTPSVGTAVSLWRRAS-SIPSISTRQRPFKCLAISK-------CTTDQAPEALGPYSQGIKANNVIYVSGSLGLI
        M WS  +S     +  STA+   R  TP V   V     A  S+  +S+R  PF  L++S         +T++AP ALGPYSQ IKANN++++SG LGLI
Subjt:  MAWSAAQSFQ---ILASTAISRQRSLTPSVGTAVSLWRRAS-SIPSISTRQRPFKCLAISK-------CTTDQAPEALGPYSQGIKANNVIYVSGSLGLI

Query:  PETGELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI
        PETG+ +S+ + DQTEQ LKN+G IL+A GADY  VVKTTIMLA++ DF  VNEIYAKYF  +P+PARST+Q  ALP NAKIEI+ IA +
Subjt:  PETGELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI

Arabidopsis top hitse value%identityAlignment
AT3G20390.1 endoribonuclease L-PSP family protein1.9e-4252.63Show/hide
Query:  MAWSAAQSFQ---ILASTAISRQRSLTPSVGTAVSLWRRAS-SIPSISTRQRPFKCLAISK-------CTTDQAPEALGPYSQGIKANNVIYVSGSLGLI
        M WS  +S     +  STA+   R  TP V   V     A  S+  +S+R  PF  L++S         +T++AP ALGPYSQ IKANN++++SG LGLI
Subjt:  MAWSAAQSFQ---ILASTAISRQRSLTPSVGTAVSLWRRAS-SIPSISTRQRPFKCLAISK-------CTTDQAPEALGPYSQGIKANNVIYVSGSLGLI

Query:  PETGELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI
        PETG+ +S+ + DQTEQ LKN+G IL+A GADY  VVKTTIMLA++ DF  VNEIYAKYF  +P+PARST+Q  ALP NAKIEI+ IA +
Subjt:  PETGELISDDIADQTEQALKNVGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGGTCCGCAGCTCAGAGCTTCCAAATTCTGGCCTCCACCGCCATTTCACGGCAGCGATCCCTCACTCCCTCAGTCGGCACCGCCGTCTCCCTGTGGCGGCGGGC
TTCTTCAATTCCATCTATTTCAACCCGCCAAAGGCCCTTCAAATGCCTTGCCATTTCCAAGTGTACTACTGACCAGGCTCCAGAAGCATTAGGGCCATATTCTCAGGGAA
TCAAAGCCAACAACGTTATATATGTGTCTGGCTCCCTAGGTTTAATTCCTGAGACAGGGGAATTGATCTCAGATGATATTGCAGATCAAACTGAGCAGGCCCTCAAAAAT
GTAGGTGCAATATTGAGAGCTGGAGGTGCTGATTATGATAGAGTTGTTAAGACAACTATTATGTTGGCTAATGTAGAAGACTTTGCATTAGTAAATGAGATTTATGCAAA
ATATTTTTCACACTCACCTGCACCAGCTCGATCAACATTTCAAGCTGGAGCATTGCCCAGAAATGCTAAGATTGAAATCGATGCAATAGCTGTGATTTGA
mRNA sequenceShow/hide mRNA sequence
CGTAAATGAAGCATTGAGTTCCATCGAGCGACTAAATTAATCTGTGAGGAAGAAGGAATTAAGAAGGCAAACACATATGGCTTGGTCCGCAGCTCAGAGCTTCCAAATTC
TGGCCTCCACCGCCATTTCACGGCAGCGATCCCTCACTCCCTCAGTCGGCACCGCCGTCTCCCTGTGGCGGCGGGCTTCTTCAATTCCATCTATTTCAACCCGCCAAAGG
CCCTTCAAATGCCTTGCCATTTCCAAGTGTACTACTGACCAGGCTCCAGAAGCATTAGGGCCATATTCTCAGGGAATCAAAGCCAACAACGTTATATATGTGTCTGGCTC
CCTAGGTTTAATTCCTGAGACAGGGGAATTGATCTCAGATGATATTGCAGATCAAACTGAGCAGGCCCTCAAAAATGTAGGTGCAATATTGAGAGCTGGAGGTGCTGATT
ATGATAGAGTTGTTAAGACAACTATTATGTTGGCTAATGTAGAAGACTTTGCATTAGTAAATGAGATTTATGCAAAATATTTTTCACACTCACCTGCACCAGCTCGATCA
ACATTTCAAGCTGGAGCATTGCCCAGAAATGCTAAGATTGAAATCGATGCAATAGCTGTGATTTGAAGTATATTATAATAGTTTTACAAGGCATCAATATTATCATAAAT
TAAATAAGTTGGAGATAAGCTTATTAAAGGGAAAATCCACTAAATTCTGTTTGCTTTGTGTATTATTACCTTAAGAGGCTTTATCTTGTTACCAACATTTTTATTGTAAT
AATTTTATTTTCACCAAAATATGCTTTCTAAGCTGTGGAAGTTGAAATAAAGCTAATAGAAAGATGTCTTGGTTTTGAAGTGCCCTTCTCATTGCTACAATGGTTAATTA
CTTGTGTAAATTTTTTAGTTCATGATGTTAATTTCATTGCAATTTGTGA
Protein sequenceShow/hide protein sequence
MAWSAAQSFQILASTAISRQRSLTPSVGTAVSLWRRASSIPSISTRQRPFKCLAISKCTTDQAPEALGPYSQGIKANNVIYVSGSLGLIPETGELISDDIADQTEQALKN
VGAILRAGGADYDRVVKTTIMLANVEDFALVNEIYAKYFSHSPAPARSTFQAGALPRNAKIEIDAIAVI