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Lsi05G005910 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G005910
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:7357285..7359735
RNA-Seq ExpressionLsi05G005910
SyntenyLsi05G005910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACU24488.1 unknown [Glycine max]2.3e-0734.45Show/hide
Query:  WFSRAIACESSSSVRTSTFNVLHLEHASTKSVTNGYEYHSVNLR-------GSFLPTSLRSGTEKETSRLACKLLGSPKTSSCIEKCFELSRHHTESSRE
        W S AI  + S ++ ++T  VLHLEH+ +K ++N  + HS+  +        SFL +SL SG  KE S   CKLL  P+    +++   L RH     R+
Subjt:  WFSRAIACESSSSVRTSTFNVLHLEHASTKSVTNGYEYHSVNLR-------GSFLPTSLRSGTEKETSRLACKLLGSPKTSSCIEKCFELSRHHTESSRE

Query:  AKNKPIGLGEFVWGDYWYI
         K  PIG  +    + WY+
Subjt:  AKNKPIGLGEFVWGDYWYI

KAB8083812.1 hypothetical protein EE612_006147 [Oryza sativa]5.5e-2241.1Show/hide
Query:  EVLSLVEGLLQLESRWFSRAIACESSSSVRTSTFNVLHLEHASTKSVTNGYEYHSV------NLRGSFLPTSLRSGTEKETSRLACKLLGSPKTSSCIEK
        EVL LVEG+LQL  R   RA+  + + +VR +  N  H++H  T+ V +  E+H+V      +LR S L T+L +  E++   LACK L +P+ + CI++
Subjt:  EVLSLVEGLLQLESRWFSRAIACESSSSVRTSTFNVLHLEHASTKSVTNGYEYHSV------NLRGSFLPTSLRSGTEKETSRLACKLLGSPKTSSCIEK

Query:  CFELSRHHTESSREAKNKPIGLGEFVWGDYWYITLRWCTHLAKDFL---GRYLPQLGFNTFYR
        CF L  HH +  RE K   I L +F+W D W+I LR   HL+K FL    R LP    NTF R
Subjt:  CFELSRHHTESSREAKNKPIGLGEFVWGDYWYITLRWCTHLAKDFL---GRYLPQLGFNTFYR

KAG0593371.1 hypothetical protein KC19_1G324400 [Ceratodon purpureus]6.3e-1836.72Show/hide
Query:  VLSLVEGLLQLESRWFSRAIACESSSSVRTSTFNVLHLEHASTKSVTNGYEYHSVNLR-------GSFLPTSLRSGTEKETSRLACKLLGSPKTSSCIEK
        VL+LVE  L+L+ RW +  IACESS SVR  T  ++H +H S+ SV++G E H+V  +         FL T+L SGT++E   L+ + L  P+ +  ++K
Subjt:  VLSLVEGLLQLESRWFSRAIACESSSSVRTSTFNVLHLEHASTKSVTNGYEYHSVNLR-------GSFLPTSLRSGTEKETSRLACKLLGSPKTSSCIEK

Query:  CFELSRHHTESSREAKNKPIGLGEFVWGDYWYITLRWCTHLAKDFLGRYLPQLGFN---TFYRLSPLLNLFSKFLNI
          ELS HH  S  E + KP+G G+ +  D  +I LR   HL ++ L + L  L  N     +R+  LL+   + L++
Subjt:  CFELSRHHTESSREAKNKPIGLGEFVWGDYWYITLRWCTHLAKDFLGRYLPQLGFN---TFYRLSPLLNLFSKFLNI

KAG0632282.1 hypothetical protein M758_1G317300 [Ceratodon purpureus]1.3e-1837.29Show/hide
Query:  VLSLVEGLLQLESRWFSRAIACESSSSVRTSTFNVLHLEHASTKSVTNGYEYHSVNLR-------GSFLPTSLRSGTEKETSRLACKLLGSPKTSSCIEK
        VL+LVE  L+L+ RW +  IACESS SVR  T  ++H +H S+ SV++G E H+V  +         FL T+L SGT++E   L+ + L  P+ +  ++K
Subjt:  VLSLVEGLLQLESRWFSRAIACESSSSVRTSTFNVLHLEHASTKSVTNGYEYHSVNLR-------GSFLPTSLRSGTEKETSRLACKLLGSPKTSSCIEK

Query:  CFELSRHHTESSREAKNKPIGLGEFVWGDYWYITLRWCTHLAKDFLGRYLPQLGFN---TFYRLSPLLNLFSKFLNI
          ELSRHH  S  E + KP+G G+ +  D  +I LR   HL ++ L + L  L  N     +R+  LL+   + L++
Subjt:  CFELSRHHTESSREAKNKPIGLGEFVWGDYWYITLRWCTHLAKDFLGRYLPQLGFN---TFYRLSPLLNLFSKFLNI

TrEMBL top hitse value%identityAlignment
A0A0P0V908 Os01g0784833 protein2.7e-2241.1Show/hide
Query:  EVLSLVEGLLQLESRWFSRAIACESSSSVRTSTFNVLHLEHASTKSVTNGYEYHSV------NLRGSFLPTSLRSGTEKETSRLACKLLGSPKTSSCIEK
        EVL LVEG+LQL  R   RA+  + + +VR +  N  H++H  T+ V +  E+H+V      +LR S L T+L +  E++   LACK L +P+ + CI++
Subjt:  EVLSLVEGLLQLESRWFSRAIACESSSSVRTSTFNVLHLEHASTKSVTNGYEYHSV------NLRGSFLPTSLRSGTEKETSRLACKLLGSPKTSSCIEK

Query:  CFELSRHHTESSREAKNKPIGLGEFVWGDYWYITLRWCTHLAKDFL---GRYLPQLGFNTFYR
        CF L  HH +  RE K   I L +F+W D W+I LR   HL+K FL    R LP    NTF R
Subjt:  CFELSRHHTESSREAKNKPIGLGEFVWGDYWYITLRWCTHLAKDFL---GRYLPQLGFNTFYR

A0A7C9DQ05 Uncharacterized protein1.7e-1343.75Show/hide
Query:  GSFLPTSLRSGTEKETSRLACKLLGSPKTSSCIEKCFELSRHHTESSREAKNKPIGLGEFVWGDYWYITLRWCTHLAKDFLG---RYLPQLGFNTFYRLS
        GS L T+LR+ T K+ SRL+CKLL SP+ SS I KCF+LS HH +SS E + + I L +    +   I L WC HL K  +    R LP+  FN+F+R  
Subjt:  GSFLPTSLRSGTEKETSRLACKLLGSPKTSSCIEKCFELSRHHTESSREAKNKPIGLGEFVWGDYWYITLRWCTHLAKDFLG---RYLPQLGFNTFYRLS

Query:  PLLNLFSKFLNI
            L  + LN+
Subjt:  PLLNLFSKFLNI

C6TNJ6 Uncharacterized protein1.1e-0734.45Show/hide
Query:  WFSRAIACESSSSVRTSTFNVLHLEHASTKSVTNGYEYHSVNLR-------GSFLPTSLRSGTEKETSRLACKLLGSPKTSSCIEKCFELSRHHTESSRE
        W S AI  + S ++ ++T  VLHLEH+ +K ++N  + HS+  +        SFL +SL SG  KE S   CKLL  P+    +++   L RH     R+
Subjt:  WFSRAIACESSSSVRTSTFNVLHLEHASTKSVTNGYEYHSVNLR-------GSFLPTSLRSGTEKETSRLACKLLGSPKTSSCIEKCFELSRHHTESSRE

Query:  AKNKPIGLGEFVWGDYWYI
         K  PIG  +    + WY+
Subjt:  AKNKPIGLGEFVWGDYWYI

J3L4R6 Uncharacterized protein7.1e-1542.74Show/hide
Query:  KEVLSLVEGLLQLESRWFSRAIACESSSSVRTSTFNVLHLEHASTKSVTNGYEYHSV------NLRGSFLPTSLRSGTEKETSRLACKLLGSPKTSSCIE
        +EVL LVEG+LQL  R   RA+  E + +VR +T N +H++H  TK + +  E+H+V      +LR S L T+L  G E++ S LACK L  P+ + CI+
Subjt:  KEVLSLVEGLLQLESRWFSRAIACESSSSVRTSTFNVLHLEHASTKSVTNGYEYHSV------NLRGSFLPTSLRSGTEKETSRLACKLLGSPKTSSCIE

Query:  KCFELSRHHTESSREAK
        +CF L  HH +  RE K
Subjt:  KCFELSRHHTESSREAK

T1LR03 Uncharacterized protein1.9e-2342.28Show/hide
Query:  KEVLSLVEGLLQLESRWFSRAIACESSSSVRTSTFNVLHLEHASTKSVTNGYEYHSV-------NLRGSFLPTSLRSGTEKETSRLACKLLGSPKTSSCI
        ++VL+LVEG+LQL  RW  R I  + + +VR +T N +H+E   T+ V +G E+H+V       +LR S LP +L +  E++  R ACK L  P+ + CI
Subjt:  KEVLSLVEGLLQLESRWFSRAIACESSSSVRTSTFNVLHLEHASTKSVTNGYEYHSV-------NLRGSFLPTSLRSGTEKETSRLACKLLGSPKTSSCI

Query:  EKCFELSRHHTESSREAKNKPIGLGEFVWGDYWYITLRWCTHLAKDFLG
        ++   L  HHT+  R+ K  PI L +F+W D W I L  CTHL+K FLG
Subjt:  EKCFELSRHHTESSREAKNKPIGLGEFVWGDYWYITLRWCTHLAKDFLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGACAAAGAAGCACAAATCTAAATAAGGTTGATAGGTTTGGATTTGTTTTAGCGAAGAAGGGGAAAAAAGAGGTACTTTCCTTGGTGGAAGGCTTGCTCCAACT
CGAGAGCCGATGGTTTTCTCGAGCCATCGCCTGCGAAAGTTCCAGCTCCGTAAGGACTTCCACCTTTAACGTGCTCCATCTCGAACATGCCAGCACCAAAAGTGTAACCA
ATGGGTACGAATATCATTCCGTGAACTTACGCGGTAGTTTCTTGCCCACCTCCCTGAGATCCGGTACTGAAAAAGAGACCAGCAGGCTTGCCTGCAAGTTGTTGGGTTCT
CCAAAGACCTCCAGTTGCATCGAGAAATGCTTTGAATTGAGCCGCCATCATACCGAATCTAGTCGGGAAGCCAAAAACAAACCCATCGGCCTCGGAGAGTTCGTTTGGGG
TGATTATTGGTACATCACTCTTCGGTGGTGCACTCATCTTGCCAAGGACTTCCTCGGACGTTACCTGCCACAACTTGGCTTCAACACCTTCTACCGATTGAGCCCCCTTC
TTAATCTCTTCAGCAAGTTTCTCAACATAAACCGCGGACGACATGTTCTAAATGGTTTACCATCAGGGAATAAAAATCTACAGGACAACAAATCTGTC
mRNA sequenceShow/hide mRNA sequence
GCCCTTTACCTATGGCGGGACAAAGAAGCACAAATCTAAATAAGGTTGATAGGTTTGGATTTGTTTTAGCGAAGAAGGGGAAAAAAGAGGTACTTTCCTTGGTGGAAGGC
TTGCTCCAACTCGAGAGCCGATGGTTTTCTCGAGCCATCGCCTGCGAAAGTTCCAGCTCCGTAAGGACTTCCACCTTTAACGTGCTCCATCTCGAACATGCCAGCACCAA
AAGTGTAACCAATGGGTACGAATATCATTCCGTGAACTTACGCGGTAGTTTCTTGCCCACCTCCCTGAGATCCGGTACTGAAAAAGAGACCAGCAGGCTTGCCTGCAAGT
TGTTGGGTTCTCCAAAGACCTCCAGTTGCATCGAGAAATGCTTTGAATTGAGCCGCCATCATACCGAATCTAGTCGGGAAGCCAAAAACAAACCCATCGGCCTCGGAGAG
TTCGTTTGGGGTGATTATTGGTACATCACTCTTCGGTGGTGCACTCATCTTGCCAAGGACTTCCTCGGACGTTACCTGCCACAACTTGGCTTCAACACCTTCTACCGATT
GAGCCCCCTTCTTAATCTCTTCAGCAAGTTTCTCAACATAAACCGCGGACGACATGTTCTAAATGGTTTACCATCAGGGAATAAAAATCTACAGGACAACAAATCTGTC
Protein sequenceShow/hide protein sequence
MAGQRSTNLNKVDRFGFVLAKKGKKEVLSLVEGLLQLESRWFSRAIACESSSSVRTSTFNVLHLEHASTKSVTNGYEYHSVNLRGSFLPTSLRSGTEKETSRLACKLLGS
PKTSSCIEKCFELSRHHTESSREAKNKPIGLGEFVWGDYWYITLRWCTHLAKDFLGRYLPQLGFNTFYRLSPLLNLFSKFLNINRGRHVLNGLPSGNKNLQDNKSV