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Lsi05G006180 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G006180
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionXanthine/uracil permease family protein
Genome locationchr05:7616886..7618384
RNA-Seq ExpressionLsi05G006180
SyntenyLsi05G006180
Gene Ontology termsGO:0006269 - DNA replication, synthesis of RNA primer (biological process)
GO:0006865 - amino acid transport (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0010089 - xylem development (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003896 - DNA primase activity (molecular function)
GO:0015293 - symporter activity (molecular function)
InterPro domainsIPR039280 - VASCULAR-RELATED UNKNOWN PROTEIN


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047143.1 Xanthine/uracil permease family protein [Cucumis melo var. makuwa]4.0e-2866.67Show/hide
Query:  ATSRICIFNQENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDLEDTA
        A  +IC   +E++C+ T FHED +WS+SSSMDDLLMFD+ S+             SSSYE+F+TR+CCSSAVDGGAQPSASSF+ K+RKMAADDDLEDTA
Subjt:  ATSRICIFNQENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDLEDTA

Query:  TSPPHPSIVSK
        TSPPHPSIVSK
Subjt:  TSPPHPSIVSK

KAA0061379.1 Xan_ur_permease domain-containing protein [Cucumis melo var. makuwa]8.9e-2869.61Show/hide
Query:  QENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDLEDTATSPPHPSIV
        +E++C+ T FHED +WS+SSSMDDLLMFD+ S+             SSSYE+F+TR+CCSSAVDGGAQPSASSF+ K+RKMAADDDLEDTATSPPHPSIV
Subjt:  QENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDLEDTATSPPHPSIV

Query:  SK
        SK
Subjt:  SK

TYK14734.1 putative nucleobase-ascorbate transporter 10 [Cucumis melo var. makuwa]8.9e-2869.61Show/hide
Query:  QENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDLEDTATSPPHPSIV
        +E++C+ T FHED +WS+SSSMDDLLMFD+ S+             SSSYE+F+TR+CCSSAVDGGAQPSASSF+ K+RKMAADDDLEDTATSPPHPSIV
Subjt:  QENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDLEDTATSPPHPSIV

Query:  SK
        SK
Subjt:  SK

XP_008463437.1 PREDICTED: uncharacterized protein LOC103501601 [Cucumis melo]1.6e-5366.14Show/hide
Query:  MENSATSRICIFNQENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDL
        MENSA SRIC   +E++C+ T FHED +WS+SSSMDDLLMFD+ S+             SSSYE+F+TR+CCSSAVDGGAQ SASSF+ KRRKMAADDDL
Subjt:  MENSATSRICIFNQENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDL

Query:  EDTATSPPHPSIVS----------------------KGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA
        EDTATSPPHPSIVS                      KGKGS ED GEVEDRII+VG +GRD NKNYCSTGLKNIGLCLVP+SMALNYFA
Subjt:  EDTATSPPHPSIVS----------------------KGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA

XP_011652737.2 uncharacterized protein LOC105435073 [Cucumis sativus]2.3e-5265.61Show/hide
Query:  MENSATSRICIFNQENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDL
        MENSATSRIC   +E+ C+   FHED +WS+SSSMDDLLMFD+ ++T            SSSYE F+T +CCSSAVDGGAQPSASSF+ KRRKMAADDDL
Subjt:  MENSATSRICIFNQENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDL

Query:  EDTATSPPHPSIVS----------------------KGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA
        EDTATSPPHPSIVS                      KG GS ED GEVEDRI EVGF+GRD NKN+CSTGLKNIGLCLVP+SMALNYFA
Subjt:  EDTATSPPHPSIVS----------------------KGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA

TrEMBL top hitse value%identityAlignment
A0A0A0L2F7 Uncharacterized protein1.1e-5265.61Show/hide
Query:  MENSATSRICIFNQENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDL
        MENSATSRIC   +E+ C+   FHED +WS+SSSMDDLLMFD+ ++T            SSSYE F+T +CCSSAVDGGAQPSASSF+ KRRKMAADDDL
Subjt:  MENSATSRICIFNQENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDL

Query:  EDTATSPPHPSIVS----------------------KGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA
        EDTATSPPHPSIVS                      KG GS ED GEVEDRI EVGF+GRD NKN+CSTGLKNIGLCLVP+SMALNYFA
Subjt:  EDTATSPPHPSIVS----------------------KGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA

A0A1S3CKU1 uncharacterized protein LOC1035016017.8e-5466.14Show/hide
Query:  MENSATSRICIFNQENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDL
        MENSA SRIC   +E++C+ T FHED +WS+SSSMDDLLMFD+ S+             SSSYE+F+TR+CCSSAVDGGAQ SASSF+ KRRKMAADDDL
Subjt:  MENSATSRICIFNQENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDL

Query:  EDTATSPPHPSIVS----------------------KGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA
        EDTATSPPHPSIVS                      KGKGS ED GEVEDRII+VG +GRD NKNYCSTGLKNIGLCLVP+SMALNYFA
Subjt:  EDTATSPPHPSIVS----------------------KGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA

A0A5A7TU96 Xanthine/uracil permease family protein1.9e-2866.67Show/hide
Query:  ATSRICIFNQENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDLEDTA
        A  +IC   +E++C+ T FHED +WS+SSSMDDLLMFD+ S+             SSSYE+F+TR+CCSSAVDGGAQPSASSF+ K+RKMAADDDLEDTA
Subjt:  ATSRICIFNQENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDLEDTA

Query:  TSPPHPSIVSK
        TSPPHPSIVSK
Subjt:  TSPPHPSIVSK

A0A5A7V6T3 Xan_ur_permease domain-containing protein4.3e-2869.61Show/hide
Query:  QENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDLEDTATSPPHPSIV
        +E++C+ T FHED +WS+SSSMDDLLMFD+ S+             SSSYE+F+TR+CCSSAVDGGAQPSASSF+ K+RKMAADDDLEDTATSPPHPSIV
Subjt:  QENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDLEDTATSPPHPSIV

Query:  SK
        SK
Subjt:  SK

A0A5D3BKS2 Putative CTD small phosphatase-like protein 27.8e-5466.14Show/hide
Query:  MENSATSRICIFNQENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDL
        MENSA SRIC   +E++C+ T FHED +WS+SSSMDDLLMFD+ S+             SSSYE+F+TR+CCSSAVDGGAQ SASSF+ KRRKMAADDDL
Subjt:  MENSATSRICIFNQENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDL

Query:  EDTATSPPHPSIVS----------------------KGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA
        EDTATSPPHPSIVS                      KGKGS ED GEVEDRII+VG +GRD NKNYCSTGLKNIGLCLVP+SMALNYFA
Subjt:  EDTATSPPHPSIVS----------------------KGKGSDEDNGEVEDRIIEVGFMGRD-NKNYCSTGLKNIGLCLVPLSMALNYFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACTCAGCCACCTCAAGAATCTGCATTTTCAACCAGGAGAATCAGTGCCAAACGACGTCGTTTCACGAGGATAGTAATTGGAGTTCTTCTTCCTCCATGGACGA
TCTTCTCATGTTCGACATTTACAGTAGTACAACTTATTCAAATCACCATAATAATGTTGTATTTTCTTCTTCTTCTTATGAGTATTTTGAAACTCGCATTTGTTGTTCAT
CCGCCGTTGACGGCGGAGCTCAGCCTTCTGCTTCCTCCTTCCAACGGAAGCGGAGGAAGATGGCGGCCGATGATGATCTTGAAGATACTGCAACTTCTCCTCCTCATCCT
TCCATAGTTTCCAAGGGAAAAGGAAGTGATGAAGACAATGGGGAGGTTGAAGATAGAATAATTGAAGTGGGTTTTATGGGGAGGGATAATAAGAATTATTGTAGCACAGG
GCTTAAGAATATTGGCCTTTGTTTAGTTCCTCTATCCATGGCTCTCAATTATTTTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACTCAGCCACCTCAAGAATCTGCATTTTCAACCAGGAGAATCAGTGCCAAACGACGTCGTTTCACGAGGATAGTAATTGGAGTTCTTCTTCCTCCATGGACGA
TCTTCTCATGTTCGACATTTACAGTAGTACAACTTATTCAAATCACCATAATAATGTTGTATTTTCTTCTTCTTCTTATGAGTATTTTGAAACTCGCATTTGTTGTTCAT
CCGCCGTTGACGGCGGAGCTCAGCCTTCTGCTTCCTCCTTCCAACGGAAGCGGAGGAAGATGGCGGCCGATGATGATCTTGAAGATACTGCAACTTCTCCTCCTCATCCT
TCCATAGTTTCCAAGGGAAAAGGAAGTGATGAAGACAATGGGGAGGTTGAAGATAGAATAATTGAAGTGGGTTTTATGGGGAGGGATAATAAGAATTATTGTAGCACAGG
GCTTAAGAATATTGGCCTTTGTTTAGTTCCTCTATCCATGGCTCTCAATTATTTTGCTTAG
Protein sequenceShow/hide protein sequence
MENSATSRICIFNQENQCQTTSFHEDSNWSSSSSMDDLLMFDIYSSTTYSNHHNNVVFSSSSYEYFETRICCSSAVDGGAQPSASSFQRKRRKMAADDDLEDTATSPPHP
SIVSKGKGSDEDNGEVEDRIIEVGFMGRDNKNYCSTGLKNIGLCLVPLSMALNYFA