; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G006230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G006230
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description2S sulfur-rich seed storage protein 2-like
Genome locationchr05:7674771..7676233
RNA-Seq ExpressionLsi05G006230
SyntenyLsi05G006230
Gene Ontology termsGO:0045735 - nutrient reservoir activity (molecular function)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily
IPR044723 - AAI/SS protein, conserved domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650140.1 hypothetical protein Csa_011445, partial [Cucumis sativus]2.3e-4391Show/hide
Query:  IRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDLRSTT
        IR GERLRHCE+LL++PRRFR LLAAEEEEDAVEHLEECCQQL+GMDDACRCEGLRQIVQRRRQQG+L G+DVGQMLERATNLPSVCRLSRRRCDLRSTT
Subjt:  IRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDLRSTT

XP_008463441.1 PREDICTED: 2S sulfur-rich seed storage protein 2-like [Cucumis melo]8.4e-4693.14Show/hide
Query:  RQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDLRS
        +QIRGGERLRHCE+LL+RPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI+QRRRQQG+L G+DVGQMLERATNLPSVCRLSRRRCDLRS
Subjt:  RQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDLRS

Query:  TT
        TT
Subjt:  TT

XP_022942616.1 2S sulfur-rich seed storage protein 2-like [Cucurbita moschata]6.2e-4186.41Show/hide
Query:  KMRQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDL
        + RQ   GERLRHCEQLL RPRR RQLL AEEEEDAVEHLE+CCQQLRGMDDACRCEGLRQIVQRRRQQGR+ GIDVGQMLERATNLPSVCRLS+RRC+L
Subjt:  KMRQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDL

Query:  RST
        RS+
Subjt:  RST

XP_022984798.1 2S sulfur-rich seed storage protein 2-like [Cucurbita maxima]2.8e-4187.38Show/hide
Query:  KMRQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDL
        + RQ   GERLRHCEQLL RPRR RQLL AEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGR+ GIDVGQMLERATNLPSVCRLS+RRC+L
Subjt:  KMRQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDL

Query:  RST
        RS+
Subjt:  RST

XP_031738807.1 2S sulfur-rich seed storage protein 2-like [Cucumis sativus]7.8e-4490.2Show/hide
Query:  RQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDLRS
        +QIR GERLRHCE+LL++PRRFR LLAAEEEEDAVEHLEECCQQL+GMDDACRCEGLRQIVQRRRQQG+L G+DVGQMLERATNLPSVCRLSRRRCDLRS
Subjt:  RQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDLRS

Query:  TT
        TT
Subjt:  TT

TrEMBL top hitse value%identityAlignment
A0A0A0L7P7 AAI domain-containing protein3.8e-4490.2Show/hide
Query:  RQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDLRS
        +QIR GERLRHCE+LL++PRRFR LLAAEEEEDAVEHLEECCQQL+GMDDACRCEGLRQIVQRRRQQG+L G+DVGQMLERATNLPSVCRLSRRRCDLRS
Subjt:  RQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDLRS

Query:  TT
        TT
Subjt:  TT

A0A1S3CJQ3 2S sulfur-rich seed storage protein 2-like4.1e-4693.14Show/hide
Query:  RQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDLRS
        +QIRGGERLRHCE+LL+RPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI+QRRRQQG+L G+DVGQMLERATNLPSVCRLSRRRCDLRS
Subjt:  RQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDLRS

Query:  TT
        TT
Subjt:  TT

A0A2I0JHZ1 2S albumin-like5.3e-1443.3Show/hide
Query:  QIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDL
        QI+  ++L HC+Q+L+R  R+  L     E+   E L++CCQQLR +++ CRC+G+ +IVQ ++QQGRL G  + ++++ A NLP++CRLS +RC +
Subjt:  QIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDL

A0A6J1FPC9 2S sulfur-rich seed storage protein 2-like3.0e-4186.41Show/hide
Query:  KMRQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDL
        + RQ   GERLRHCEQLL RPRR RQLL AEEEEDAVEHLE+CCQQLRGMDDACRCEGLRQIVQRRRQQGR+ GIDVGQMLERATNLPSVCRLS+RRC+L
Subjt:  KMRQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDL

Query:  RST
        RS+
Subjt:  RST

A0A6J1JBK8 2S sulfur-rich seed storage protein 2-like1.3e-4187.38Show/hide
Query:  KMRQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDL
        + RQ   GERLRHCEQLL RPRR RQLL AEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGR+ GIDVGQMLERATNLPSVCRLS+RRC+L
Subjt:  KMRQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDL

Query:  RST
        RS+
Subjt:  RST

SwissProt top hitse value%identityAlignment
P01089 2S albumin5.0e-0934.74Show/hide
Query:  QIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRC
        QI+  + LR C++ + +    +    ++ +E     L  CC  L+ M   CRCEGLRQ +++++ QG+L G DV +    A NLPS+C +S   C
Subjt:  QIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRC

P04403 2S sulfur-rich seed storage protein 16.5e-0934.69Show/hide
Query:  QIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQG-RLHGIDVGQMLERATNLPSVCRLSRRRCDL
        Q++  + L HC ++  R +                H+ ECC+QL GMD++CRCEGLR ++ R +Q+  +  G  + +M+  A N+PS C LS  RC +
Subjt:  QIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQG-RLHGIDVGQMLERATNLPSVCRLSRRRCDL

P0C8Y8 2S sulfur-rich seed storage protein 21.2e-1036.79Show/hide
Query:  QIRGGERLRHC-----EQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRC
        Q+   ++L HC     +Q+   P +  + L   EE     HL+ECC+QL  MD+ CRCEGLR +++R+R++  L G  + +++ +A NL S C LS +RC
Subjt:  QIRGGERLRHC-----EQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRC

Query:  DLRSTT
         +   T
Subjt:  DLRSTT

P93198 2S albumin seed storage protein (Fragment)3.9e-1438.78Show/hide
Query:  QIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDLR
        QI+  + L HC+  L +  R        +E++  +H  +CCQQL  MD+ C+CEGLRQ+V+R++QQ  L G ++ +M++ A +LP+ C +S +RC++R
Subjt:  QIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDLR

Q39649 2S albumin5.0e-0936.63Show/hide
Query:  KMRQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVE--HLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRC
        + RQ+   E LR CEQ L +  R    +   E     E    +ECC++L+ +D+ CRC+ L +I +  ++Q R  G +  QML++A NLPS+C +  +RC
Subjt:  KMRQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVE--HLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRC

Query:  D
        D
Subjt:  D

Arabidopsis top hitse value%identityAlignment
AT5G54740.1 seed storage albumin 58.4e-0437.04Show/hide
Query:  LEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRL
        L+ CC +LR +D  C C  L++  Q+ R QG      V  + + A NLP+VC++
Subjt:  LEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCATGTCGTTAAAAATGAGACAGATTAGGGGGGGCGAACGGCTCCGGCACTGCGAGCAGTTATTGAGTCGGCCCCGCCGCTTCCGGCAGCTGTTAGCAGCGGA
GGAAGAGGAAGACGCCGTGGAGCATCTGGAGGAATGCTGCCAGCAGCTTAGAGGGATGGACGATGCGTGCCGGTGCGAGGGGCTTCGACAAATCGTGCAGCGCCGTCGGC
AGCAAGGGCGGCTGCACGGGATCGACGTCGGCCAAATGCTGGAAAGAGCCACCAACTTGCCGTCGGTCTGCCGGCTCAGCCGACGCCGCTGTGACCTCCGGTCGACCACC
ACTCCATGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACCATGTCGTTAAAAATGAGACAGATTAGGGGGGGCGAACGGCTCCGGCACTGCGAGCAGTTATTGAGTCGGCCCCGCCGCTTCCGGCAGCTGTTAGCAGCGGA
GGAAGAGGAAGACGCCGTGGAGCATCTGGAGGAATGCTGCCAGCAGCTTAGAGGGATGGACGATGCGTGCCGGTGCGAGGGGCTTCGACAAATCGTGCAGCGCCGTCGGC
AGCAAGGGCGGCTGCACGGGATCGACGTCGGCCAAATGCTGGAAAGAGCCACCAACTTGCCGTCGGTCTGCCGGCTCAGCCGACGCCGCTGTGACCTCCGGTCGACCACC
ACTCCATGGTAG
Protein sequenceShow/hide protein sequence
MATMSLKMRQIRGGERLRHCEQLLSRPRRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRLHGIDVGQMLERATNLPSVCRLSRRRCDLRSTT
TPW