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Lsi05G006290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G006290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptiontranscription factor ILR3-like
Genome locationchr05:7768870..7771113
RNA-Seq ExpressionLsi05G006290
SyntenyLsi05G006290
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0055072 - iron ion homeostasis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015510.1 Transcription factor ILR3 [Cucurbita argyrosperma subsp. argyrosperma]5.1e-1386.67Show/hide
Query:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
        MVSPETTNWLFDYALMDDIPV+DANFS PT+GFSWSM  LN SSN
Subjt:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
XP_022932170.1 transcription factor ILR3-like [Cucurbita moschata]5.1e-1386.67Show/hide
Query:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
        MVSPETTNWLFDYALMDDIPV+DANFS PT+GFSWSM  LN SSN
Subjt:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
XP_022985260.1 transcription factor ILR3-like isoform X1 [Cucurbita maxima]6.0e-1488.89Show/hide
Query:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
        MVSPETTNWLFDYALMDDIPV+DANFS PT+GFSWSM PLN SSN
Subjt:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
XP_022985261.1 transcription factor ILR3-like isoform X2 [Cucurbita maxima]6.0e-1488.89Show/hide
Query:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
        MVSPETTNWLFDYALMDDIPV+DANFS PT+GFSWSM PLN SSN
Subjt:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
XP_038905787.1 transcription factor ILR3 [Benincasa hispida]2.7e-1488.89Show/hide
Query:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
        MVSPET+NWLFDYALMDDIPVSDANFS PT+GFSWS+ PLNGSSN
Subjt:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
TrEMBL top hitse value%identityAlignment
A0A6J1DL34 transcription factor ILR34.6e-1282.22Show/hide
Query:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
        MVSPETTNWLFDYALMDDIPV+D NFS  ++GFSWSM  LNGSSN
Subjt:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
A0A6J1F1H1 transcription factor ILR3-like2.5e-1386.67Show/hide
Query:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
        MVSPETTNWLFDYALMDDIPV+DANFS PT+GFSWSM  LN SSN
Subjt:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
A0A6J1IQF0 transcription factor ILR3-like1.8e-1180.43Show/hide
Query:  MVSPETTNWLFDYALMDDIPV-SDANFSPPTSGFSWSMNPLNGSSN
        MVSPETTNWLFDYAL+DDIPV  DANFS PT+GFSWSM P N SS+
Subjt:  MVSPETTNWLFDYALMDDIPV-SDANFSPPTSGFSWSMNPLNGSSN
A0A6J1J7N3 transcription factor ILR3-like isoform X22.9e-1488.89Show/hide
Query:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
        MVSPETTNWLFDYALMDDIPV+DANFS PT+GFSWSM PLN SSN
Subjt:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
A0A6J1JAV0 transcription factor ILR3-like isoform X12.9e-1488.89Show/hide
Query:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
        MVSPETTNWLFDYALMDDIPV+DANFS PT+GFSWSM PLN SSN
Subjt:  MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCCCCTGAAACCACCAATTGGCTCTTTGATTATGCTTTAATGGATGATATTCCTGTTTCCGATGCCAATTTCTCTCCACCCACTTCCGGCTTCTCCTGGTCTAT
GAATCCGCTCAACGGCTCCTCCAATGATTGCTACACCTATAGCTTAAAAGCAGTTTCTGTAGTTCTCTGGTCTCATCTCATCAAGAGAATATTACTTTTTCTTGCATCAT
CTGATTTAGAAGTTGGAAGCTTAAGACTTCGATCTTGTTACTTCGAGTTTGATAATCAGAAGATTTTTCTTCATGTTCTTCGATTTCTGGTCGAAGATTGTAGCTTATTC
AAAGTACGGAAACTTTATATGAAATTTTTTATTACTTTCTTTCACTCTGCTGTCTCTTATGTATATATGTATACTTCGAGGAAAGATAATTTGATCAACGTAGAGGAGAG
ATTGCCAATGCACTTATATATACAGTTCTTCCTCACGGAAATTGAAGGATCATTGCTAGAATCGGATGGCCTGAAGGAGCCTGGTTCAAAGAAGAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCCCCTGAAACCACCAATTGGCTCTTTGATTATGCTTTAATGGATGATATTCCTGTTTCCGATGCCAATTTCTCTCCACCCACTTCCGGCTTCTCCTGGTCTAT
GAATCCGCTCAACGGCTCCTCCAATGATTGCTACACCTATAGCTTAAAAGCAGTTTCTGTAGTTCTCTGGTCTCATCTCATCAAGAGAATATTACTTTTTCTTGCATCAT
CTGATTTAGAAGTTGGAAGCTTAAGACTTCGATCTTGTTACTTCGAGTTTGATAATCAGAAGATTTTTCTTCATGTTCTTCGATTTCTGGTCGAAGATTGTAGCTTATTC
AAAGTACGGAAACTTTATATGAAATTTTTTATTACTTTCTTTCACTCTGCTGTCTCTTATGTATATATGTATACTTCGAGGAAAGATAATTTGATCAACGTAGAGGAGAG
ATTGCCAATGCACTTATATATACAGTTCTTCCTCACGGAAATTGAAGGATCATTGCTAGAATCGGATGGCCTGAAGGAGCCTGGTTCAAAGAAGAGGTAA
Protein sequenceShow/hide protein sequence
MVSPETTNWLFDYALMDDIPVSDANFSPPTSGFSWSMNPLNGSSNDCYTYSLKAVSVVLWSHLIKRILLFLASSDLEVGSLRLRSCYFEFDNQKIFLHVLRFLVEDCSLF
KVRKLYMKFFITFFHSAVSYVYMYTSRKDNLINVEERLPMHLYIQFFLTEIEGSLLESDGLKEPGSKKR