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Lsi05G006330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G006330
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionYL1_C domain-containing protein
Genome locationchr05:7781553..7781759
RNA-Seq ExpressionLsi05G006330
SyntenyLsi05G006330
Gene Ontology termsGO:0019787 - ubiquitin-like protein transferase activity (molecular function)
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8077725.1 hypothetical protein FH972_016259 [Carpinus fangiana]1.3e-1269.81Show/hide
Query:  KSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQS
        +S +  K +SPCDVEAL+KCL+ENNGD +KC+SQI+AFKSSCSLKKPN S +S
Subjt:  KSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQS

KAE8077726.1 hypothetical protein FH972_016259 [Carpinus fangiana]1.3e-1269.81Show/hide
Query:  KSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQS
        +S +  K +SPCDVEAL+KCL+ENNGD +KC+SQI+AFKSSCSLKKPN S +S
Subjt:  KSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQS

KAE8650146.1 hypothetical protein Csa_010997, partial [Cucumis sativus]2.2e-2590.91Show/hide
Query:  MDGITEKSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQSGRNDFDT
        MDGITEKSRAVTKN SPCDVEAL+KCLQENNGDR+KCESQIQAF  SCSLKK NPSLQSGRNDFDT
Subjt:  MDGITEKSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQSGRNDFDT

KAF3954648.1 hypothetical protein CMV_020027 [Castanea mollissima]5.6e-1369.81Show/hide
Query:  KSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQS
        +S  V K +SPCDVEAL+KCL+EN GD +KC+SQI+AFKSSCS+KKPNPS +S
Subjt:  KSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQS

KDO52000.1 hypothetical protein CISIN_1g035370mg [Citrus sinensis]2.5e-1362.5Show/hide
Query:  TEKSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQSGRNDFDTGV
        T +S    K +SPCDVEAL+KCL+EN GD +KC+SQI+AFKSSCSLKKP+ SL+S +  F++GV
Subjt:  TEKSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQSGRNDFDTGV

TrEMBL top hitse value%identityAlignment
A0A067EDM2 Uncharacterized protein1.2e-1362.5Show/hide
Query:  TEKSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQSGRNDFDTGV
        T +S    K +SPCDVEAL+KCL+EN GD +KC+SQI+AFKSSCSLKKP+ SL+S +  F++GV
Subjt:  TEKSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQSGRNDFDTGV

A0A0A0L2G8 Uncharacterized protein5.6e-2791.18Show/hide
Query:  MDGITEKSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQSGRNDFDTGV
        MDGITEKSRAVTKN SPCDVEAL+KCLQENNGDR+KCESQIQAF  SCSLKK NPSLQSGRNDFDTGV
Subjt:  MDGITEKSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQSGRNDFDTGV

A0A2H5NN95 Uncharacterized protein1.2e-1362.5Show/hide
Query:  TEKSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQSGRNDFDTGV
        T +S    K +SPCDVEAL+KCL+EN GD +KC+SQI+AFKSSCSLKKP+ SL+S +  F++GV
Subjt:  TEKSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQSGRNDFDTGV

A0A5N6RFC3 Uncharacterized protein6.1e-1369.81Show/hide
Query:  KSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQS
        +S +  K +SPCDVEAL+KCL+ENNGD +KC+SQI+AFKSSCSLKKPN S +S
Subjt:  KSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQS

A0A5N6RHF1 Uncharacterized protein6.1e-1369.81Show/hide
Query:  KSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQS
        +S +  K +SPCDVEAL+KCL+ENNGD +KC+SQI+AFKSSCSLKKPN S +S
Subjt:  KSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGTATAACTGAAAAATCTAGGGCTGTGACGAAGAATCTATCGCCATGCGATGTTGAAGCTCTCAGGAAATGTTTGCAGGAAAACAATGGCGATCGTATCAAGTG
CGAGTCTCAAATACAAGCCTTCAAGTCTTCTTGCTCCCTAAAGAAACCAAATCCATCTTTGCAATCTGGAAGGAACGACTTCGACACTGGTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGTATAACTGAAAAATCTAGGGCTGTGACGAAGAATCTATCGCCATGCGATGTTGAAGCTCTCAGGAAATGTTTGCAGGAAAACAATGGCGATCGTATCAAGTG
CGAGTCTCAAATACAAGCCTTCAAGTCTTCTTGCTCCCTAAAGAAACCAAATCCATCTTTGCAATCTGGAAGGAACGACTTCGACACTGGTGTTTGA
Protein sequenceShow/hide protein sequence
MDGITEKSRAVTKNLSPCDVEALRKCLQENNGDRIKCESQIQAFKSSCSLKKPNPSLQSGRNDFDTGV