; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G006380 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G006380
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationchr05:7873945..7874313
RNA-Seq ExpressionLsi05G006380
SyntenyLsi05G006380
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site
IPR044205 - Calcium-binding protein KIC/PBP1/KRP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152909.1 calcium-binding protein KRP1 [Cucumis sativus]9.6e-5690.83Show/hide
Query:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        M  KNQIPQSESGF+DWLP MA NLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDL+D+ELRGMLREGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  QLMDASRYYFHECLRREFRD
        +LM+ASRY FHE LRREFRD
Subjt:  QLMDASRYYFHECLRREFRD

XP_008463452.1 PREDICTED: calcium-binding protein PBP1-like [Cucumis melo]3.4e-5387.5Show/hide
Query:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        M S N IPQSESGF+DWLP MA  LGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDL+D+ELRGMLREGD +GDGALNQMEFCVLMFRLSP
Subjt:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  QLMDASRYYFHECLRREFRD
        +LM+ASRY FHE LRREFRD
Subjt:  QLMDASRYYFHECLRREFRD

XP_022144078.1 calcium-binding protein PBP1-like [Momordica charantia]1.5e-5389.83Show/hide
Query:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        MA+KNQ PQS+SGFEDWLPAMA+ LGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDL+DEELRGML EGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  QLMDASRYYFHECLRREF
         LMDASRY+  E LRREF
Subjt:  QLMDASRYYFHECLRREF

XP_022985284.1 calcium-binding protein PBP1-like [Cucurbita maxima]2.2e-5286.89Show/hide
Query:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        MA  NQIPQSESGFEDWLP MA  LGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAALGLGD +DEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  QLMDASRYYFHECLRREFRDFS
        +LMDASRY F + LRREF +FS
Subjt:  QLMDASRYYFHECLRREFRDFS

XP_038905287.1 calcium-binding protein KRP1-like [Benincasa hispida]2.2e-6095.9Show/hide
Query:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        MASKNQIPQSES FEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAA LGLGDLTDEELRGMLREGDFDGDGALN+MEFCVLMFRLSP
Subjt:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  QLMDASRYYFHECLRREFRDFS
        QLM+ASRY FHECLRREFRDFS
Subjt:  QLMDASRYYFHECLRREFRDFS

TrEMBL top hitse value%identityAlignment
A0A0A0L2H0 EF-hand domain-containing protein4.7e-5690.83Show/hide
Query:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        M  KNQIPQSESGF+DWLP MA NLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDL+D+ELRGMLREGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  QLMDASRYYFHECLRREFRD
        +LM+ASRY FHE LRREFRD
Subjt:  QLMDASRYYFHECLRREFRD

A0A1S3CKV7 calcium-binding protein PBP1-like1.7e-5387.5Show/hide
Query:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        M S N IPQSESGF+DWLP MA  LGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDL+D+ELRGMLREGD +GDGALNQMEFCVLMFRLSP
Subjt:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  QLMDASRYYFHECLRREFRD
        +LM+ASRY FHE LRREFRD
Subjt:  QLMDASRYYFHECLRREFRD

A0A5A7SII1 Calcium-binding protein PBP1-like1.7e-5387.5Show/hide
Query:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        M S N IPQSESGF+DWLP MA  LGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDL+D+ELRGMLREGD +GDGALNQMEFCVLMFRLSP
Subjt:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  QLMDASRYYFHECLRREFRD
        +LM+ASRY FHE LRREFRD
Subjt:  QLMDASRYYFHECLRREFRD

A0A6J1CSD5 calcium-binding protein PBP1-like7.4e-5489.83Show/hide
Query:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        MA+KNQ PQS+SGFEDWLPAMA+ LGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDL+DEELRGML EGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  QLMDASRYYFHECLRREF
         LMDASRY+  E LRREF
Subjt:  QLMDASRYYFHECLRREF

A0A6J1JCW0 calcium-binding protein PBP1-like1.1e-5286.89Show/hide
Query:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
        MA  NQIPQSESGFEDWLP MA  LGGEGLIGELCNGFNLLMD EKGVIN ESLKRNAAALGLGD +DEELRGMLREGDFDGDGALNQMEFCVLMFRLSP
Subjt:  MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSP

Query:  QLMDASRYYFHECLRREFRDFS
        +LMDASRY F + LRREF +FS
Subjt:  QLMDASRYYFHECLRREFRDFS

SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP12.2e-3975.23Show/hide
Query:  ESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA-LGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPQLMDASRYY
        +  F D+LP MA NLGGEGLIGELCNGF LLMDREKGVI FESL+RNAAA LGLGDLTDE++R M++EGDFD DGALNQMEFCVLMFRLSP LM+ASR  
Subjt:  ESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA-LGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPQLMDASRYY

Query:  FHECLRREF
          E +  EF
Subjt:  FHECLRREF

Q06827 Caltractin2.4e-0941.86Show/hide
Query:  FEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLS
        FE++L  M   +G      E+   F L  D E G I+F++LKR A  LG  ++TDEEL+ M+ E D DGDG +N+ EF  +M + S
Subjt:  FEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLS

Q9LSQ6 Calcium-binding protein PBP11.2e-3565.52Show/hide
Query:  KNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAA-ALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPQL
        +NQ PQ    F+D+ P MA  LGGEGLI E+C GF LLMD++KGVI FESL+RNA+  LGLGDLTD+++R M+ EGDFD DGALNQMEFCVLMFRLSP+L
Subjt:  KNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAA-ALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPQL

Query:  MDASRYYFHECLRREF
        M+ASR    E +  EF
Subjt:  MDASRYYFHECLRREF

Q9R1K9 Centrin-21.4e-0941.86Show/hide
Query:  FEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLS
        F D+L  M   +  +    E+   F L  D E G I+F++LKR A  LG  +LTDEEL+ M+ E D DGDG +N+ EF  +M + S
Subjt:  FEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLS

Q9ZPX9 Calcium-binding protein KIC1.6e-2449.53Show/hide
Query:  ESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPQLMDASRYYF
        E+ +ED LP MA  +  E  + ELC GF+LL D E+ +I  ESL+RN+  LG+  ++ E+ +GM+REGD DGDGALNQ EFCVLM RLSP++M+ +  + 
Subjt:  ESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPQLMDASRYYF

Query:  HECLRRE
         + L +E
Subjt:  HECLRRE

Arabidopsis top hitse value%identityAlignment
AT1G66410.1 calmodulin 42.2e-0535.37Show/hide
Query:  FEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLM
        F ++L  MA  +       EL   F +    + G I+   L+     LG   LTDEE+  M+RE D DGDG +N  EF  +M
Subjt:  FEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLM

AT1G66410.2 calmodulin 42.2e-0535.37Show/hide
Query:  FEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLM
        F ++L  MA  +       EL   F +    + G I+   L+     LG   LTDEE+  M+RE D DGDG +N  EF  +M
Subjt:  FEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLM

AT2G46600.1 Calcium-binding EF-hand family protein1.1e-2549.53Show/hide
Query:  ESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPQLMDASRYYF
        E+ +ED LP MA  +  E  + ELC GF+LL D E+ +I  ESL+RN+  LG+  ++ E+ +GM+REGD DGDGALNQ EFCVLM RLSP++M+ +  + 
Subjt:  ESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPQLMDASRYYF

Query:  HECLRRE
         + L +E
Subjt:  HECLRRE

AT4G27280.1 Calcium-binding EF-hand family protein1.6e-4075.23Show/hide
Query:  ESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA-LGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPQLMDASRYY
        +  F D+LP MA NLGGEGLIGELCNGF LLMDREKGVI FESL+RNAAA LGLGDLTDE++R M++EGDFD DGALNQMEFCVLMFRLSP LM+ASR  
Subjt:  ESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAA-LGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPQLMDASRYY

Query:  FHECLRREF
          E +  EF
Subjt:  FHECLRREF

AT5G54490.1 pinoid-binding protein 18.2e-3765.52Show/hide
Query:  KNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAA-ALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPQL
        +NQ PQ    F+D+ P MA  LGGEGLI E+C GF LLMD++KGVI FESL+RNA+  LGLGDLTD+++R M+ EGDFD DGALNQMEFCVLMFRLSP+L
Subjt:  KNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAA-ALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPQL

Query:  MDASRYYFHECLRREF
        M+ASR    E +  EF
Subjt:  MDASRYYFHECLRREF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCAAGAACCAAATCCCCCAATCGGAATCTGGATTCGAAGATTGGCTGCCGGCGATGGCCTACAACCTCGGTGGCGAGGGGCTGATCGGCGAACTCTGCAACGG
ATTCAATCTGCTGATGGACAGAGAGAAGGGAGTGATTAATTTCGAGAGCTTGAAGAGGAATGCGGCTGCGCTAGGGCTTGGGGATCTGACGGATGAGGAGCTTAGAGGAA
TGTTAAGGGAAGGAGATTTCGACGGCGATGGCGCTCTTAATCAGATGGAATTTTGTGTTCTTATGTTCAGATTAAGTCCTCAATTAATGGACGCTTCCCGCTACTACTTC
CATGAATGTCTCCGCCGAGAATTTAGGGATTTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCAAGAACCAAATCCCCCAATCGGAATCTGGATTCGAAGATTGGCTGCCGGCGATGGCCTACAACCTCGGTGGCGAGGGGCTGATCGGCGAACTCTGCAACGG
ATTCAATCTGCTGATGGACAGAGAGAAGGGAGTGATTAATTTCGAGAGCTTGAAGAGGAATGCGGCTGCGCTAGGGCTTGGGGATCTGACGGATGAGGAGCTTAGAGGAA
TGTTAAGGGAAGGAGATTTCGACGGCGATGGCGCTCTTAATCAGATGGAATTTTGTGTTCTTATGTTCAGATTAAGTCCTCAATTAATGGACGCTTCCCGCTACTACTTC
CATGAATGTCTCCGCCGAGAATTTAGGGATTTTTCTTGA
Protein sequenceShow/hide protein sequence
MASKNQIPQSESGFEDWLPAMAYNLGGEGLIGELCNGFNLLMDREKGVINFESLKRNAAALGLGDLTDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPQLMDASRYYF
HECLRREFRDFS