; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G006440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G006440
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionWD repeat-containing protein 25
Genome locationchr05:8139426..8153752
RNA-Seq ExpressionLsi05G006440
SyntenyLsi05G006440
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR019775 - WD40 repeat, conserved site
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046999.1 WD repeat-containing protein 25 isoform X2 [Cucumis melo var. makuwa]7.1e-16090Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA
        MESLFKAYSN+SDDYDEEDEPKPKRLALSSSPSKRPELE  KFKPN RPSHC  SN +P E IM+PGRY+SKRERALLSSAPASRAPES  NPSLQ SP 
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA

Query:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL
        VGSLSDSD+PRDILS LRSR KDY QQGLMPKRMSV+LDCH KAVN+VQWSPSHAHLLASAAMDHTICIWNVWSTGQKLA KSSFHNAAVKDVQWSQ GL
Subjt:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL

Query:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES
        S+LSCGYDCASRLIDVEKGTEVGVF EDQGV VVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLG ILD+EFTPNSNQFISSSDVS SNSSES
Subjt:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES

Query:  SIIVWDVTREVPLSYQACLM
        SIIVWDVTREVPLSYQACL+
Subjt:  SIIVWDVTREVPLSYQACLM

XP_011650540.1 WD repeat-containing protein 25 isoform X1 [Cucumis sativus]3.7e-15689.24Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA
        MESLFKAYSN+SDDYDEEDEPKPKRLALSSSPSKRPE E  KFKPN R  HC DSNSE  E IM+PGRYVSKRERALLSS PASRAP+S  NPS Q +P 
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA

Query:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL
        VGSLSDSD+PRDILS LRSR KDY QQGLMPKRMSV LDCH KAVN+VQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKS+FHNAAVKDVQWSQ GL
Subjt:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL

Query:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES
        S+LSCGYDCASRLIDVEKGTEVGVF EDQGV VVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVS SNSSES
Subjt:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES

Query:  SIIVWDVTREVPLSYQ
        SII+WDVTREVPLSYQ
Subjt:  SIIVWDVTREVPLSYQ

XP_016901209.1 PREDICTED: WD repeat-containing protein 25 isoform X1 [Cucumis melo]5.1e-15882.49Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA
        MESLFKAYSN+SDDYDEEDEPKPKRLALSSSPSKRPELE  KFKPN RPSHC  SN +P E IM+PGRY+SKRERALLSSAPASRAPES  NPSLQ SP 
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA

Query:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL
        VGSLSDSD+PRDILS LRSR KDY QQGLMPKRMSV+LDCH KAVN+VQWSPSHAHLLASAAMDHTICIWNVWSTGQKLA KSSFHNAAVKDVQWSQ GL
Subjt:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL

Query:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES
        S+LSCGYDCASRLIDVEKGTEVGVF EDQGV VVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLG ILD+EFTPNSNQFISSSDVS SNSSES
Subjt:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES

Query:  SIIVWDVTREVPLSYQACL---------MHPMPSACFRNIKEINCKYCSVANIN
        SIIVWDVTREVPLSYQ  +          HP   A    I + N  Y ++ ++N
Subjt:  SIIVWDVTREVPLSYQACL---------MHPMPSACFRNIKEINCKYCSVANIN

XP_016901210.1 PREDICTED: WD repeat-containing protein 25 isoform X2 [Cucumis melo]8.7e-15890.19Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA
        MESLFKAYSN+SDDYDEEDEPKPKRLALSSSPSKRPELE  KFKPN RPSHC  SN +P E IM+PGRY+SKRERALLSSAPASRAPES  NPSLQ SP 
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA

Query:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL
        VGSLSDSD+PRDILS LRSR KDY QQGLMPKRMSV+LDCH KAVN+VQWSPSHAHLLASAAMDHTICIWNVWSTGQKLA KSSFHNAAVKDVQWSQ GL
Subjt:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL

Query:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES
        S+LSCGYDCASRLIDVEKGTEVGVF EDQGV VVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLG ILD+EFTPNSNQFISSSDVS SNSSES
Subjt:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES

Query:  SIIVWDVTREVPLSYQ
        SIIVWDVTREVPLSYQ
Subjt:  SIIVWDVTREVPLSYQ

XP_038903500.1 WD repeat-containing protein 25 [Benincasa hispida]9.3e-16083.62Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA
        MESLFKAYSNASDDYDEEDEPKPKRLA SSSPSKRP+LER KFKPNFRPSHC  SNSE QEGIM+PGRYVSKRERALLSSAP SRAPES LNP+LQSSP 
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA

Query:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL
        VGSLSDSD+PRDILS LRSR KDY QQGLMPKRMSV+LDCH KAVNAVQWSPSHAHLLAS AMDHTICIWNVWSTGQKL FKSSFHNAAVKDVQWSQ GL
Subjt:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL

Query:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES
        SILSCGYDCASRLIDVEKGTEVGVF EDQG+ VVKFHP+NPNLFLSGGLKGSL MWDMR GKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES
Subjt:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES

Query:  SIIVWDVTREVPLSYQACL---------MHPMPSACFRNIKEINCKYCSVANIN
        SIIVWDV REVPLSYQ  +          HP   A    I + N  Y ++ ++N
Subjt:  SIIVWDVTREVPLSYQACL---------MHPMPSACFRNIKEINCKYCSVANIN

TrEMBL top hitse value%identityAlignment
A0A1S4DZ03 WD repeat-containing protein 25 isoform X12.5e-15882.49Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA
        MESLFKAYSN+SDDYDEEDEPKPKRLALSSSPSKRPELE  KFKPN RPSHC  SN +P E IM+PGRY+SKRERALLSSAPASRAPES  NPSLQ SP 
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA

Query:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL
        VGSLSDSD+PRDILS LRSR KDY QQGLMPKRMSV+LDCH KAVN+VQWSPSHAHLLASAAMDHTICIWNVWSTGQKLA KSSFHNAAVKDVQWSQ GL
Subjt:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL

Query:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES
        S+LSCGYDCASRLIDVEKGTEVGVF EDQGV VVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLG ILD+EFTPNSNQFISSSDVS SNSSES
Subjt:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES

Query:  SIIVWDVTREVPLSYQACL---------MHPMPSACFRNIKEINCKYCSVANIN
        SIIVWDVTREVPLSYQ  +          HP   A    I + N  Y ++ ++N
Subjt:  SIIVWDVTREVPLSYQACL---------MHPMPSACFRNIKEINCKYCSVANIN

A0A1S4DZQ2 WD repeat-containing protein 25 isoform X24.2e-15890.19Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA
        MESLFKAYSN+SDDYDEEDEPKPKRLALSSSPSKRPELE  KFKPN RPSHC  SN +P E IM+PGRY+SKRERALLSSAPASRAPES  NPSLQ SP 
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA

Query:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL
        VGSLSDSD+PRDILS LRSR KDY QQGLMPKRMSV+LDCH KAVN+VQWSPSHAHLLASAAMDHTICIWNVWSTGQKLA KSSFHNAAVKDVQWSQ GL
Subjt:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL

Query:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES
        S+LSCGYDCASRLIDVEKGTEVGVF EDQGV VVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLG ILD+EFTPNSNQFISSSDVS SNSSES
Subjt:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES

Query:  SIIVWDVTREVPLSYQ
        SIIVWDVTREVPLSYQ
Subjt:  SIIVWDVTREVPLSYQ

A0A5A7U0J5 WD repeat-containing protein 25 isoform X23.5e-16090Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA
        MESLFKAYSN+SDDYDEEDEPKPKRLALSSSPSKRPELE  KFKPN RPSHC  SN +P E IM+PGRY+SKRERALLSSAPASRAPES  NPSLQ SP 
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA

Query:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL
        VGSLSDSD+PRDILS LRSR KDY QQGLMPKRMSV+LDCH KAVN+VQWSPSHAHLLASAAMDHTICIWNVWSTGQKLA KSSFHNAAVKDVQWSQ GL
Subjt:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL

Query:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES
        S+LSCGYDCASRLIDVEKGTEVGVF EDQGV VVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLG ILD+EFTPNSNQFISSSDVS SNSSES
Subjt:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES

Query:  SIIVWDVTREVPLSYQACLM
        SIIVWDVTREVPLSYQACL+
Subjt:  SIIVWDVTREVPLSYQACLM

A0A6J1FN47 WD repeat-containing protein 251.5e-14777.56Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA
        ME LF+AYSN SD+ ++EDEP+PKRLAL SS SKRP  E S+F+P FRPSH PDS SEPQ+ IM+PGRY+SKRERAL+SSAP SRAPES LNPS+QSS  
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA

Query:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL
        VGSLSDSD+PRDILS LRSR K+Y QQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMD+TICIWN+WST QKLAFKSS HNAAVKDV+WSQ GL
Subjt:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL

Query:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES
        SILSCGYDC+SRLIDVEKGTEVG+F EDQGV VVKFHPNNP++FLSGGLKGSLRMWD+RIGK+VNKYNRRLGPILDVEFTPN NQFISSSDVS+SNSSES
Subjt:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES

Query:  SIIVWDVTREVPLSYQACLMHPMPSACFR-------NIKEINCKYCSVANIN
        S+IVWDVTREVPLSYQ   M      C R        I + N  Y ++ ++N
Subjt:  SIIVWDVTREVPLSYQACLMHPMPSACFR-------NIKEINCKYCSVANIN

A0A6J1JQD9 WD repeat-containing protein 258.8e-14877.56Show/hide
Query:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA
        ME LF+AYSN SD+ +EEDEP+PKRLAL SS SKRP  E S+F+P FRPSHCPDS SEPQ+ IM+PGRY+SKRERAL+SSAP SRAPES LNPS+Q S  
Subjt:  MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPA

Query:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL
        VGSLSDSD+PRDILS LRSR K+Y QQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMD+TICIWN+WST QKLAFKSS HNAAVKDV+WSQ GL
Subjt:  VGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGL

Query:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES
        SILSCGYDC+SRLIDVEKGTE+GVF EDQGV VVKFHPN+P+LFLSGG+KGSLRMWD+RIGK+VNKYNRRLGPILDVEFTPN NQFISSSDVS+SNSSES
Subjt:  SILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSES

Query:  SIIVWDVTREVPLSYQACLMHPMPSACFR-------NIKEINCKYCSVANIN
        S+IVWDVTREVPLSYQ   M      C R        I + N  Y ++ ++N
Subjt:  SIIVWDVTREVPLSYQACLMHPMPSACFR-------NIKEINCKYCSVANIN

SwissProt top hitse value%identityAlignment
E9Q349 WD repeat-containing protein 253.5e-3231.69Show/hide
Query:  RPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPAVGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRM
        +P  ++S F+      +   S  +  E  +LP  Y+ KR R L +  P +   +    P   +  A   L    +   +   ++      +++  +PK++
Subjt:  RPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPAVGSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRM

Query:  SVSLDCHTKAVNAVQWSP--SHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGLSILSCGYDCASRLIDVEKGTEVGVFNEDQGVT
           L  H   VN++QW P    +H+L SA+MD T  +WN   +G  L    S H+ AV+  +WS  G  ILS G+D A  L D+E GT+V     D  VT
Subjt:  SVSLDCHTKAVNAVQWSP--SHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGLSILSCGYDCASRLIDVEKGTEVGVFNEDQGVT

Query:  VVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ
         +KFHP + N+FL GG    ++ WDMR GK+V  Y   +   LD+ F    ++F+SS+D S  +S++ +II WD      +S Q
Subjt:  VVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ

O43071 Pre-mRNA-processing factor 172.9e-2331.33Show/hide
Query:  IPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGLSILSCGYD
        +P D+   L     +  Q   +PK+   +   HTK ++ +++ P   HLL S +MD+ I IW V+   + L      H   ++D+ +SQ G S LS  +D
Subjt:  IPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGLSILSCGYD

Query:  CASRLIDVEKGTEVGVFNEDQGVTVVKFH--PNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWD
           +L D E G  +  FN D+    VKF   P+ PN FL+G     +  +D+R   +V  Y+  LG I  + F  N  +F+++SD       +SS+  W+
Subjt:  CASRLIDVEKGTEVGVFNEDQGVTVVKFH--PNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWD

Query:  VTREVPLSYQACL-MHPMPSACFR-NIKEINCK
            VP+ + A + MH MP    R N K I C+
Subjt:  VTREVPLSYQACL-MHPMPSACFR-NIKEINCK

O60508 Pre-mRNA-processing factor 177.2e-2232.13Show/hide
Query:  IPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSF-HNAAVKDVQWSQHGLSILSCGY
        IP+D+   LRS      ++  +PK+       HTK V+AV+  P   HLL S +MD  I +W V+  G++   ++   H+ AV+D+ ++  G   LS  Y
Subjt:  IPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSF-HNAAVKDVQWSQHGLSILSCGY

Query:  DCASRLIDVEKGTEVGVFNEDQGVTVVKFHP--NNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVW
        D   +L D E G  +  F   +    VKF+P  +  NLF++G     +  WD+R G++V +Y+R LG +  + F   + +F+S+SD       + S+ VW
Subjt:  DCASRLIDVEKGTEVGVFNEDQGVTVVKFHP--NNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVW

Query:  DVTREVPLSYQA-CLMHPMPS
        +    V   Y A   MH MP+
Subjt:  DVTREVPLSYQA-CLMHPMPS

Q64LD2 WD repeat-containing protein 251.7e-3134.87Show/hide
Query:  YFQQGLMPKRMSVSLDCHTKAVNAVQWSP--SHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGLSILSCGYDCASRLIDVEKGTE
        ++++  +P+++   L  H   VN +QW P  S +H+L S +MD T  +WN   +G  L    S H  AV+  +W+  G  ILS G+D A  L D+E GT+
Subjt:  YFQQGLMPKRMSVSLDCHTKAVNAVQWSP--SHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGLSILSCGYDCASRLIDVEKGTE

Query:  VGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ
        +     D  +T +KFHP + N+FL GG    ++ WD+R GK++  Y   +   LD+ F    ++F+SS+D S  +S++ +II WD      +S Q
Subjt:  VGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ

Q9DC48 Pre-mRNA-processing factor 179.4e-2232.13Show/hide
Query:  IPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSF-HNAAVKDVQWSQHGLSILSCGY
        IP+D+   LRS      ++  +PK+       HTK V+AV+  P   HLL S +MD  I +W V+  G +   ++   H+ AV+D+ ++  G   LS  Y
Subjt:  IPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSF-HNAAVKDVQWSQHGLSILSCGY

Query:  DCASRLIDVEKGTEVGVFNEDQGVTVVKFHP--NNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVW
        D   +L D E G  +  F   +    VKF+P  +  NLF++G     +  WD+R G++V +Y+R LG +  + F   + +F+S+SD       + S+ VW
Subjt:  DCASRLIDVEKGTEVGVFNEDQGVTVVKFHP--NNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVW

Query:  DVTREVPLSYQA-CLMHPMPS
        +    V   Y A   MH MP+
Subjt:  DVTREVPLSYQA-CLMHPMPS

Arabidopsis top hitse value%identityAlignment
AT1G10580.1 Transducin/WD40 repeat-like superfamily protein3.6e-2431.66Show/hide
Query:  MPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGLSILSCGYDCASRLIDVEKGTEVGVFNEDQ
        +PKR+  +   HTK V+A+++ P   HLL SA MD  + IW+V+++G+ +      H  AV+D+ +S  G   L+ GYD   +  D E G  +  F+  +
Subjt:  MPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGLSILSCGYDCASRLIDVEKGTEVGVFNEDQ

Query:  GVTVVKFHPNN--PNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSY-QACLMHPMPS
           VVK +P++   N+ L+G     +  WD+  G++  +Y++ LG +  + F  N+ +F++SSD       + S+ VW+    V + Y     MH MPS
Subjt:  GVTVVKFHPNN--PNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSY-QACLMHPMPS

AT1G61210.1 Transducin/WD40 repeat-like superfamily protein1.4e-0924.28Show/hide
Query:  VSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGLSILSCGYDCASRLIDVEKGTEVGVF-NEDQGVTVV
        +SL  HT AV++V +  +   +LA A+    I +W+V       AF    H +    V++   G  + S   D   ++ D+ K   +  +    +G++ +
Subjt:  VSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGLSILSCGYDCASRLIDVEKGTEVGVF-NEDQGVTVV

Query:  KFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDV
        +F P+     +SGGL   +++WD+  GK+++++    GPI  ++F P          + A+ S++ ++  WD+
Subjt:  KFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDV

AT1G61210.2 Transducin/WD40 repeat-like superfamily protein1.4e-0924.28Show/hide
Query:  VSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGLSILSCGYDCASRLIDVEKGTEVGVF-NEDQGVTVV
        +SL  HT AV++V +  +   +LA A+    I +W+V       AF    H +    V++   G  + S   D   ++ D+ K   +  +    +G++ +
Subjt:  VSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGLSILSCGYDCASRLIDVEKGTEVGVF-NEDQGVTVV

Query:  KFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDV
        +F P+     +SGGL   +++WD+  GK+++++    GPI  ++F P          + A+ S++ ++  WD+
Subjt:  KFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDV

AT5G54520.1 Transducin/WD40 repeat-like superfamily protein2.6e-8352.69Show/hide
Query:  MESLFKAYSNASDDYDE---EDEPKPKRLALSSSPSKR--PELERSKFKPNFRPSHCPDSNSEPQEG----------IMLPGRYVSKRERALLSSAPASR
        M+ +  +Y+N SDD  E    +    K  A  S PSKR  P  E  ++KP  RP     S SE Q            + +PGRYVSKRER+LL+S     
Subjt:  MESLFKAYSNASDDYDE---EDEPKPKRLALSSSPSKR--PELERSKFKPNFRPSHCPDSNSEPQEG----------IMLPGRYVSKRERALLSSAPASR

Query:  APE--SVLNPSLQSSPAV-GSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFK
         P+  S L+    SSP V GS+SDSD+PR +LS +R R K    Q  MP RMS+SL  HTKAV A+ WS SH HLLASA +D  + +WNVWS  +K    
Subjt:  APE--SVLNPSLQSSPAV-GSLSDSDIPRDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFK

Query:  SSFHNAAVKDVQWSQHGLSILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPN
           HNA VKDV+WS+ GLS+LSCGYDC SRL DVE+G E   F ED+ V VVKFHP+N N+FLSGG KGSLR+WD+R  K V++Y R LGPILDVEF   
Subjt:  SSFHNAAVKDVQWSQHGLSILSCGYDCASRLIDVEKGTEVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPN

Query:  SNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ
          QFISSSDVS  N SE+++IVWD++REVPLS Q
Subjt:  SNQFISSSDVSASNSSESSIIVWDVTREVPLSYQ

AT5G67320.1 WD-40 repeat family protein4.2e-0929.03Show/hide
Query:  HTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHG---------LSILSCGYDCASRLIDVEKGTEVGVFN-EDQG
        H   VN V+W P+   LLAS + D T  IWN+  +          H   +  ++WS  G         L++ S  +D   +L D E G  +  FN   + 
Subjt:  HTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHG---------LSILSCGYDCASRLIDVEKGTEVGVFN-EDQG

Query:  VTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQ
        V  + F PN      SG L  S+ +W ++ GK+V  Y    G I +V +    N+
Subjt:  VTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCTCTGTTCAAAGCTTACTCAAATGCTTCTGACGATTATGACGAAGAAGATGAACCTAAGCCCAAGCGCTTGGCCCTCTCCTCTTCACCTTCGAAGAGACCAGA
ACTCGAACGTTCCAAATTCAAGCCGAACTTCCGGCCATCGCATTGCCCGGACTCGAATTCAGAGCCTCAAGAGGGGATTATGCTTCCTGGACGCTACGTTTCCAAGAGAG
AGCGAGCACTATTGAGTTCAGCTCCAGCTTCAAGGGCTCCGGAGTCAGTTCTTAATCCATCCCTCCAGTCTTCACCTGCAGTTGGAAGTCTTTCGGATTCTGATATTCCG
CGTGACATCTTGTCTCAATTGAGAAGTAGAACTAAAGATTATTTTCAGCAAGGTCTGATGCCTAAAAGGATGTCTGTAAGTCTTGATTGCCATACGAAAGCTGTCAATGC
AGTTCAATGGTCTCCAAGTCATGCTCATCTTCTTGCTTCTGCTGCTATGGATCACACAATCTGCATATGGAACGTATGGAGCACAGGGCAGAAGCTAGCATTCAAGTCAA
GCTTTCACAACGCTGCAGTTAAAGATGTTCAATGGTCACAACATGGATTATCTATTCTTTCTTGTGGATACGATTGTGCTTCAAGATTGATTGATGTTGAGAAGGGGACA
GAAGTTGGAGTATTCAACGAGGATCAAGGCGTTACAGTTGTAAAGTTCCATCCTAACAACCCAAATCTATTCCTTTCTGGTGGACTGAAAGGAAGCCTCCGAATGTGGGA
TATGAGAATTGGAAAAATGGTTAACAAATACAACCGACGCCTTGGTCCAATCCTTGATGTTGAATTTACTCCTAATAGCAATCAGTTCATCTCTTCTAGCGATGTTTCTG
CAAGCAATAGCAGTGAAAGCTCTATCATCGTTTGGGATGTCACAAGAGAAGTTCCGCTTTCATATCAGGCATGTCTTATGCATCCAATGCCCTCTGCATGTTTCCGAAAC
ATTAAGGAAATTAATTGCAAATACTGCTCTGTGGCAAATATTAATAGTTATTACTTTAATATCACGAATGAT
mRNA sequenceShow/hide mRNA sequence
ATCAACCCTAGCCCATCATTTTCATATCTGCTCATCTTTCAATTTCAAATTTTCTCATTTTCTCCTCTCTCCCATCGACATCCAGCCGCAGATCGGCCACACCGCCACAC
CAACCCCACTCCGTTGTCGGTCGTTGGCACACCCCTCTTATCAATTTTCTTTCTCCTTCTCTTATTGCGCTCTTTGCTGTAACCTCACTCCGCAAGCTGCCATTTGCTCA
ATGCTTCCATCTCGAGATCTATCGTCGTGATCAATGTTTTTCTTTTGTTCTTCTCTATTTCAGAGCTATGGAATCTCTGTTCAAAGCTTACTCAAATGCTTCTGACGATT
ATGACGAAGAAGATGAACCTAAGCCCAAGCGCTTGGCCCTCTCCTCTTCACCTTCGAAGAGACCAGAACTCGAACGTTCCAAATTCAAGCCGAACTTCCGGCCATCGCAT
TGCCCGGACTCGAATTCAGAGCCTCAAGAGGGGATTATGCTTCCTGGACGCTACGTTTCCAAGAGAGAGCGAGCACTATTGAGTTCAGCTCCAGCTTCAAGGGCTCCGGA
GTCAGTTCTTAATCCATCCCTCCAGTCTTCACCTGCAGTTGGAAGTCTTTCGGATTCTGATATTCCGCGTGACATCTTGTCTCAATTGAGAAGTAGAACTAAAGATTATT
TTCAGCAAGGTCTGATGCCTAAAAGGATGTCTGTAAGTCTTGATTGCCATACGAAAGCTGTCAATGCAGTTCAATGGTCTCCAAGTCATGCTCATCTTCTTGCTTCTGCT
GCTATGGATCACACAATCTGCATATGGAACGTATGGAGCACAGGGCAGAAGCTAGCATTCAAGTCAAGCTTTCACAACGCTGCAGTTAAAGATGTTCAATGGTCACAACA
TGGATTATCTATTCTTTCTTGTGGATACGATTGTGCTTCAAGATTGATTGATGTTGAGAAGGGGACAGAAGTTGGAGTATTCAACGAGGATCAAGGCGTTACAGTTGTAA
AGTTCCATCCTAACAACCCAAATCTATTCCTTTCTGGTGGACTGAAAGGAAGCCTCCGAATGTGGGATATGAGAATTGGAAAAATGGTTAACAAATACAACCGACGCCTT
GGTCCAATCCTTGATGTTGAATTTACTCCTAATAGCAATCAGTTCATCTCTTCTAGCGATGTTTCTGCAAGCAATAGCAGTGAAAGCTCTATCATCGTTTGGGATGTCAC
AAGAGAAGTTCCGCTTTCATATCAGGCATGTCTTATGCATCCAATGCCCTCTGCATGTTTCCGAAACATTAAGGAAATTAATTGCAAATACTGCTCTGTGGCAAATATTA
ATAGTTATTACTTTAATATCACGAATGAT
Protein sequenceShow/hide protein sequence
MESLFKAYSNASDDYDEEDEPKPKRLALSSSPSKRPELERSKFKPNFRPSHCPDSNSEPQEGIMLPGRYVSKRERALLSSAPASRAPESVLNPSLQSSPAVGSLSDSDIP
RDILSQLRSRTKDYFQQGLMPKRMSVSLDCHTKAVNAVQWSPSHAHLLASAAMDHTICIWNVWSTGQKLAFKSSFHNAAVKDVQWSQHGLSILSCGYDCASRLIDVEKGT
EVGVFNEDQGVTVVKFHPNNPNLFLSGGLKGSLRMWDMRIGKMVNKYNRRLGPILDVEFTPNSNQFISSSDVSASNSSESSIIVWDVTREVPLSYQACLMHPMPSACFRN
IKEINCKYCSVANINSYYFNITND