; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G006480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G006480
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function, DUF538
Genome locationchr05:8241465..8242390
RNA-Seq ExpressionLsi05G006480
SyntenyLsi05G006480
Gene Ontology termsNA
InterPro domainsIPR007493 - Protein of unknown function DUF538
IPR036758 - At5g01610-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600749.1 hypothetical protein SDJN03_05982, partial [Cucurbita argyrosperma subsp. sororia]5.9e-6985.54Show/hide
Query:  AAFFH-FTIFFLI-----SVSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQ
        A FFH FT FF I     S+ LP  LSLS TIHDLLRS+GLP GLLPKEVKSYTLS NGLLEVFLDGPCLTKYENRVLF+SVV+ANLSYGSLIGVQGLTQ
Subjt:  AAFFH-FTIFFLI-----SVSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQ

Query:  EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR
        EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCK QPK  LRN V KEKGFEALR
Subjt:  EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR

XP_004149935.1 uncharacterized protein LOC101212020 [Cucumis sativus]2.0e-6986.96Show/hide
Query:  HFTIFF----LISVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFL
        HF+IF     LIS+SLPS LSL S TIHDLLRSKGLPPGLLPKEVKSY+LSPNGLL+VFLDGPCLTKYENRV+F+SVV ANLSYGSLIGVQGLTQEELFL
Subjt:  HFTIFF----LISVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFL

Query:  WLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR
        WLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCK+Q KG LRNHV KEKGFE  R
Subjt:  WLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR

XP_008452337.1 PREDICTED: uncharacterized protein LOC103493397 [Cucumis melo]2.6e-6986.34Show/hide
Query:  HFTIFF----LISVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFL
        HF+IF     LIS+SLP  LSL S TIHDLLRSKGLPPGLLPKEVKSY+LSPNGLL+VFLDGPCLTKYENRV+F+SVV ANLSYGSLIGVQGLTQEELFL
Subjt:  HFTIFF----LISVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFL

Query:  WLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR
        WLPVKDIIVDDP SGLILFDIGVAHKQLALSLFEDPPSCK+QPKG LRNHV KEKGFE  R
Subjt:  WLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR

XP_022992944.1 uncharacterized protein LOC111489122 [Cucurbita maxima]3.4e-6985.54Show/hide
Query:  AAFFH-FTIFFLI-----SVSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQ
        A FFH FT+FF I     S+ LP  LSLS TIHDLLRS+GLP GLLPKEVKSYTLS NGLLEVFLDGPCLTKYENRVLF+SVV+ANLSYGSLIGVQGLTQ
Subjt:  AAFFH-FTIFFLI-----SVSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQ

Query:  EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR
        EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCK QPK  LRN V KEKGFEALR
Subjt:  EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR

XP_038905336.1 uncharacterized protein LOC120091403 [Benincasa hispida]1.4e-7892.77Show/hide
Query:  MAAFFHFTIFF-----LISVSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQ
        MAAFFHFTIFF     LIS+SLPS LSLS TIHDLLRSKGLPPGLLPKEVKSY+LSPNGLLEVFLDGPCLTKYENRVLFQSVV+ANLSYGSLIGVQGLTQ
Subjt:  MAAFFHFTIFF-----LISVSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQ

Query:  EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR
        EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCK+QPKGGLRNHV KEKGFEALR
Subjt:  EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR

TrEMBL top hitse value%identityAlignment
A0A0A0L572 Uncharacterized protein9.8e-7086.96Show/hide
Query:  HFTIFF----LISVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFL
        HF+IF     LIS+SLPS LSL S TIHDLLRSKGLPPGLLPKEVKSY+LSPNGLL+VFLDGPCLTKYENRV+F+SVV ANLSYGSLIGVQGLTQEELFL
Subjt:  HFTIFF----LISVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFL

Query:  WLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR
        WLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCK+Q KG LRNHV KEKGFE  R
Subjt:  WLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR

A0A1S3BUE7 uncharacterized protein LOC1034933971.3e-6986.34Show/hide
Query:  HFTIFF----LISVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFL
        HF+IF     LIS+SLP  LSL S TIHDLLRSKGLPPGLLPKEVKSY+LSPNGLL+VFLDGPCLTKYENRV+F+SVV ANLSYGSLIGVQGLTQEELFL
Subjt:  HFTIFF----LISVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFL

Query:  WLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR
        WLPVKDIIVDDP SGLILFDIGVAHKQLALSLFEDPPSCK+QPKG LRNHV KEKGFE  R
Subjt:  WLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR

A0A5A7VEX6 Uncharacterized protein1.3e-6986.34Show/hide
Query:  HFTIFF----LISVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFL
        HF+IF     LIS+SLP  LSL S TIHDLLRSKGLPPGLLPKEVKSY+LSPNGLL+VFLDGPCLTKYENRV+F+SVV ANLSYGSLIGVQGLTQEELFL
Subjt:  HFTIFF----LISVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFL

Query:  WLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR
        WLPVKDIIVDDP SGLILFDIGVAHKQLALSLFEDPPSCK+QPKG LRNHV KEKGFE  R
Subjt:  WLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR

A0A6J1FV48 uncharacterized protein LOC1114475562.8e-6985.54Show/hide
Query:  AAFFH-FTIFFLIS-----VSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQ
        A FFH FT FF IS     + LP  LSLS TIHDLLRS+GLP GLLPKEVKSYTLS NGLLEVFLDGPCLTKYENRVLF+SVV+ANLSYGSLIGVQGLTQ
Subjt:  AAFFH-FTIFFLIS-----VSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQ

Query:  EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR
        EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCK QPK  LRN V KEKGFEALR
Subjt:  EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR

A0A6J1JYV3 uncharacterized protein LOC1114891221.7e-6985.54Show/hide
Query:  AAFFH-FTIFFLI-----SVSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQ
        A FFH FT+FF I     S+ LP  LSLS TIHDLLRS+GLP GLLPKEVKSYTLS NGLLEVFLDGPCLTKYENRVLF+SVV+ANLSYGSLIGVQGLTQ
Subjt:  AAFFH-FTIFFLI-----SVSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQ

Query:  EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR
        EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCK QPK  LRN V KEKGFEALR
Subjt:  EELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G61667.1 Protein of unknown function, DUF5381.0e-3958.52Show/hide
Query:  SLSPTIHDLLRSKGLPPGLLPKEVKSYTL-SPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD
        S   +I +LL ++GLP GL P  V+SY+L    G LEV L  PC  ++ENRV F  V+KANLSYG L+G++GLTQEELFLWLPVK I V+DP SGL+LFD
Subjt:  SLSPTIHDLLRSKGLPPGLLPKEVKSYTL-SPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFD

Query:  IGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEK
        IGVAHKQ++ SLFEDPP C   P G +   + K K
Subjt:  IGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEK

AT3G07460.1 Protein of unknown function, DUF5382.1e-2441.27Show/hide
Query:  VSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLS-PNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPK
        +S+ + ++ + +I ++L + GLP GL PK VK +T++   G   V+L+  C  KYE  + +  +V   + Y  +  + G++ +ELFLWL VK I VD P 
Subjt:  VSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLS-PNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPK

Query:  SGLILFDIGVAHKQLALSLFEDPPSC
        SGLI FD+GV  KQ +LSLFE P  C
Subjt:  SGLILFDIGVAHKQLALSLFEDPPSC

AT3G07460.2 Protein of unknown function, DUF5382.1e-2441.27Show/hide
Query:  VSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLS-PNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPK
        +S+ + ++ + +I ++L + GLP GL PK VK +T++   G   V+L+  C  KYE  + +  +V   + Y  +  + G++ +ELFLWL VK I VD P 
Subjt:  VSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLS-PNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPK

Query:  SGLILFDIGVAHKQLALSLFEDPPSC
        SGLI FD+GV  KQ +LSLFE P  C
Subjt:  SGLILFDIGVAHKQLALSLFEDPPSC

AT5G16380.1 Protein of unknown function, DUF5381.0e-2343.84Show/hide
Query:  IFFLI-----SVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLS-PNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLW
        +FFLI     S+  P   SL  P+ +D LR   LP G++PK V ++++    G   V L  PC  K+EN+  F   +   LS G +  + G+TQ+ELFLW
Subjt:  IFFLI-----SVSLPSYLSL-SPTIHDLLRSKGLPPGLLPKEVKSYTLS-PNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLW

Query:  LPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSC---KTQPK
          VK I VD   SGLI FD+GVA KQL+LSLFE P  C   ++QP+
Subjt:  LPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSC---KTQPK

AT5G54530.1 Protein of unknown function, DUF5381.4e-4760.53Show/hide
Query:  TIFFLISVSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDI
        T+   +S+S PSY    PT+HD+LRS+GLP GLLP+EV SY L  +G LEVFL  PC  K+E  V F++VV+ NLSYGSL+GV+GL+Q+ELFLWL VKDI
Subjt:  TIFFLISVSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDI

Query:  IVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEA
        +V++P SG+I+FDIGVA KQL+LSLFEDPP CK  P G L+  + +++GFEA
Subjt:  IVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCTTCTTCCATTTCACCATTTTCTTCCTCATCTCTGTCTCTCTTCCCTCATATCTATCTCTCTCCCCCACCATTCACGACCTCCTCCGCTCCAAAGGCCTCCC
ACCTGGTCTTCTTCCAAAGGAAGTCAAATCCTACACCCTTTCCCCAAATGGCCTTCTCGAAGTCTTCTTAGATGGTCCTTGTTTGACTAAATACGAGAACAGAGTTCTTT
TTCAAAGCGTTGTTAAAGCTAATCTCAGCTATGGAAGTCTGATTGGCGTTCAAGGTCTTACTCAGGAAGAGCTGTTTCTATGGCTTCCTGTTAAAGATATAATCGTCGAT
GATCCTAAATCTGGCTTGATTCTCTTTGACATTGGTGTTGCTCATAAACAACTCGCTCTTTCTCTCTTCGAAGATCCTCCCAGTTGCAAGACCCAACCTAAAGGGGGTTT
GAGGAATCATGTGTGGAAGGAGAAAGGATTTGAAGCTCTGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATCATCAACAACAAAACAACTCTCTGCTCTTAAAATCCCCTTTTCTTCTCTTTTAATCCGCCATGGCCGCCTTCTTCCATTTCACCATTTTCTTCCTCATCTCTGTCTCT
CTTCCCTCATATCTATCTCTCTCCCCCACCATTCACGACCTCCTCCGCTCCAAAGGCCTCCCACCTGGTCTTCTTCCAAAGGAAGTCAAATCCTACACCCTTTCCCCAAA
TGGCCTTCTCGAAGTCTTCTTAGATGGTCCTTGTTTGACTAAATACGAGAACAGAGTTCTTTTTCAAAGCGTTGTTAAAGCTAATCTCAGCTATGGAAGTCTGATTGGCG
TTCAAGGTCTTACTCAGGAAGAGCTGTTTCTATGGCTTCCTGTTAAAGATATAATCGTCGATGATCCTAAATCTGGCTTGATTCTCTTTGACATTGGTGTTGCTCATAAA
CAACTCGCTCTTTCTCTCTTCGAAGATCCTCCCAGTTGCAAGACCCAACCTAAAGGGGGTTTGAGGAATCATGTGTGGAAGGAGAAAGGATTTGAAGCTCTGAGATAGAA
AGGAAAGGAAAATGCCAAAATCCTGCTGCAAAATTTTGTCTTTTTTTTTTTTTTTTCTTTTCTTTTTTTTTAATTATTTTATTTTTGTTCTGCCCCCAATGCCTATATAA
CTAAGTTAGTTCTAATAATAGTTTATACTGTTATACGAGTTACCAGAGTTGTTTTTTCGAACTCATTTCCTTTCCTTTTTTTTTTTCCTTTTTTGTATAAAAATGAAAAG
ACGAGTTTCCCTTTCTTGG
Protein sequenceShow/hide protein sequence
MAAFFHFTIFFLISVSLPSYLSLSPTIHDLLRSKGLPPGLLPKEVKSYTLSPNGLLEVFLDGPCLTKYENRVLFQSVVKANLSYGSLIGVQGLTQEELFLWLPVKDIIVD
DPKSGLILFDIGVAHKQLALSLFEDPPSCKTQPKGGLRNHVWKEKGFEALR