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Lsi05G006510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G006510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSpindle pole body component protein
Genome locationchr05:8279287..8280451
RNA-Seq ExpressionLsi05G006510
SyntenyLsi05G006510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577452.1 hypothetical protein SDJN03_25026, partial [Cucurbita argyrosperma subsp. sororia]9.2e-5888.03Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSR+ENPE T APG +EM+SLAPITTRKHRRRKR ALLPSAAKLAADWKPSLGAISEDKVVLV+ EREKSDDQTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKS

Query:  GSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        GS DGE+RGV  R+NSNDF  RRSPA+IPVVIPAFSPTPFLF
Subjt:  GSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

KAG7015524.1 hypothetical protein SDJN02_23160 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-5788.03Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSR+E PE T APG +EM+SLAPITTRKHRRRKR ALLPSAAKLAADWKPSLGAISEDKVVLV+ EREKSDDQTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKS

Query:  GSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        GSRDGE+RGV  R+NSNDF  RRSPA+IPVVIPAFSPTPFLF
Subjt:  GSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

XP_004149939.2 uncharacterized protein LOC101213465 [Cucumis sativus]2.9e-5990.21Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRK
        MKFLFEFVSCCVPVNMSRI+NPEETEA G KEMRSL PITTRKHRRRKRSALLPS AAKLAADWKPSLGAISEDKVVLVVMEREKSD+QT E ERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRK

Query:  SGSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        S SRDGESRGV  RNNSNDFSLR+SP+AIPVVIPAFSP PFLF
Subjt:  SGSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

XP_022932132.1 uncharacterized protein LOC111438455 [Cucurbita moschata]1.4e-5888.73Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSR+ENPE T APG +EM+SLAPITTRKHRRRKR ALLPSAAKLAADWKPSLGAISEDKVVLV+ EREKSDDQTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKS

Query:  GSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        GSRDGE+RGV  R+NSNDF  RRSPA+IPVVIPAFSPTPFLF
Subjt:  GSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

XP_038905048.1 uncharacterized protein LOC120091204 [Benincasa hispida]5.0e-6494.37Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSRIENPEETEAPG KE+RSLAPITTRKHRRRKRSA LPSAAKLA DWKPSLGAISEDKVVLVVMEREKSD+QTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKS

Query:  GSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        GSRDGESRGV  RNNSNDFS+RRSPAAIPVVIPAFSPTPFLF
Subjt:  GSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

TrEMBL top hitse value%identityAlignment
A0A0A0L6G1 Uncharacterized protein1.4e-5990.21Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRK
        MKFLFEFVSCCVPVNMSRI+NPEETEA G KEMRSL PITTRKHRRRKRSALLPS AAKLAADWKPSLGAISEDKVVLVVMEREKSD+QT E ERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRK

Query:  SGSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        S SRDGESRGV  RNNSNDFSLR+SP+AIPVVIPAFSP PFLF
Subjt:  SGSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

A0A1S3BTM8 uncharacterized protein LOC1034933941.3e-5789.51Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRK
        MKFLFEFVSCCVPVNMSRIENPEETEA   KEMR+LAPITTRKHRRRKRSALLPS AAKLAADWKPSLGAISEDKVVLVVMEREKSDDQ AE ERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPS-AAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRK

Query:  SGSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        SGSRDGESR V  R NSNDFSLR++P+AIPVVIPAFSP PFLF
Subjt:  SGSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

A0A6J1EVT0 uncharacterized protein LOC1114384556.9e-5988.73Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSR+ENPE T APG +EM+SLAPITTRKHRRRKR ALLPSAAKLAADWKPSLGAISEDKVVLV+ EREKSDDQTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKS

Query:  GSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        GSRDGE+RGV  R+NSNDF  RRSPA+IPVVIPAFSPTPFLF
Subjt:  GSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

A0A6J1FP47 uncharacterized protein LOC1114472251.4e-5180.28Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKS
        MKFL EFVSCCVPV++SR+ENPE TEAPG +E+RSLAPITTR HRRR+R AL  SAAK+A DW PSLGAISED VVLVVMER+KS+D+TAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKS

Query:  GSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        GS++G++RGV  RNNSNDF  RRSPAAIPVVIPAFSPTPFLF
Subjt:  GSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

A0A6J1JD62 uncharacterized protein LOC1114833131.7e-5787.32Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSR+ENPE T APG +EM+SLAPI TRKHRRRKR ALLPSAAKLAADWKPSLGAISEDKVVLV+ EREKSDDQTA SERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKS

Query:  GSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        GSRDGE+RGV  R+NSNDF  RRSPA+IPVVIPAFSPTPFLF
Subjt:  GSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G54585.1 unknown protein1.3e-0632.39Show/hide
Query:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKS
        MKFL E V  C        +  +E+ A    +  S    T  K RRR++   +       A+W+PSL  ISE+K  +  +  EK++++     +S     
Subjt:  MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKS

Query:  GSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF
        G     S G   R  S+DF       A   VIPAFSPTPF+F
Subjt:  GSRDGESRGVQSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTCCTTTTCGAGTTCGTTTCTTGCTGCGTGCCGGTGAACATGTCACGCATAGAGAATCCGGAGGAGACAGAGGCGCCAGGACCTAAGGAGATGAGATCTCTGGC
TCCGATTACAACCAGAAAACACCGGCGGAGAAAACGAAGCGCGTTATTGCCTTCGGCGGCGAAACTAGCCGCCGATTGGAAGCCGTCGCTGGGAGCGATCTCGGAGGATA
AGGTAGTTCTGGTGGTGATGGAGAGAGAGAAGAGCGATGATCAGACGGCGGAATCGGAACGATCGGTGAAAAGAAAGAGTGGATCTCGAGACGGAGAAAGCAGAGGAGTT
CAGAGCCGTAATAACAGTAACGATTTCAGCCTCAGGCGAAGTCCTGCAGCGATTCCGGTCGTGATTCCGGCGTTTTCTCCGACTCCGTTCTTGTTCTGA
mRNA sequenceShow/hide mRNA sequence
CAATACCCAACGCTTTCTATAAATTGAGAAGCAAGTCCTCTCAACTGAGGGAACTCACCTCCACCACGAATTGTCGGAATTCTACGACGGACGACGGAGCGGAAAATGGA
TTCCTGCCTAATCGGTCAATGGTAGCGATTGTAAATTTTTGGTACTTTCAACCTCGCTTCTTCCCCGGAGTCAGATCAGAGCCGTCGTTCTCGTTCTGACCACTCTTCTT
CCACGAGAGACTCGCCGGAGCGGTTAGTTTCCCGATGAAATTCCTTTTCGAGTTCGTTTCTTGCTGCGTGCCGGTGAACATGTCACGCATAGAGAATCCGGAGGAGACAG
AGGCGCCAGGACCTAAGGAGATGAGATCTCTGGCTCCGATTACAACCAGAAAACACCGGCGGAGAAAACGAAGCGCGTTATTGCCTTCGGCGGCGAAACTAGCCGCCGAT
TGGAAGCCGTCGCTGGGAGCGATCTCGGAGGATAAGGTAGTTCTGGTGGTGATGGAGAGAGAGAAGAGCGATGATCAGACGGCGGAATCGGAACGATCGGTGAAAAGAAA
GAGTGGATCTCGAGACGGAGAAAGCAGAGGAGTTCAGAGCCGTAATAACAGTAACGATTTCAGCCTCAGGCGAAGTCCTGCAGCGATTCCGGTCGTGATTCCGGCGTTTT
CTCCGACTCCGTTCTTGTTCTGATTCAATTACTCTTCCACTTTCCGATCACTCATGGCTGTGTAGTATATATATATATATAGTTTTATCATTTAGGTTGGTTGCTGTAAT
TTGTATAATTATTAATTATGATTTGGAAACAGAAAGCTGAGATTATTGAGGAAGAAAACTTTGTCCATGGAAGTTATTGCAGCTTGTTTGAGTGCTTTCTTTAATGGGGA
CTCTCTGCAATTTAAATGTTCCCATTTTTCCTCATCATGCTTTGCTTATTTCTCTGATTTCCATGCCGTTTTGGATTATTCTTAGAGCAAGAATGTTCAATCTGTTTATG
ATTCTTTACACAATTGCGTTGAAGAAACTTAATTTTGGTTCTTCAAGTTTAAGTTCTAT
Protein sequenceShow/hide protein sequence
MKFLFEFVSCCVPVNMSRIENPEETEAPGPKEMRSLAPITTRKHRRRKRSALLPSAAKLAADWKPSLGAISEDKVVLVVMEREKSDDQTAESERSVKRKSGSRDGESRGV
QSRNNSNDFSLRRSPAAIPVVIPAFSPTPFLF