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Lsi05G006660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G006660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr05:8788476..8788724
RNA-Seq ExpressionLsi05G006660
SyntenyLsi05G006660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]8.8e-2160.98Show/hide
Query:  MSTDFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH
        MS DF +W+DEY+ +R KYDD   ++E+GAEKLRQMA + DQF  QA TL+QG+IP +   ++LS FLG+IGQ LGRFGCYH
Subjt:  MSTDFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH

KAA0033848.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]5.5e-2367.09Show/hide
Query:  DFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH
        DFAIWRDEY+IMRHKY+D + QIEQG +KLR MA+  DQF  + + LQQ I+PIQ  S++LSRFLG+IG YLG FGCYH
Subjt:  DFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]6.8e-2160.98Show/hide
Query:  MSTDFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH
        MS DF +W+DEY+ +R KYDD   ++E+GAEKLRQMA++ DQF  QA TL+QG+IP +   K+LS FLG+IGQ LGRF CYH
Subjt:  MSTDFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH

KAA0065294.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]8.0e-2262.2Show/hide
Query:  MSTDFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH
        MS DF +W+DEY+ +R KYDD   ++E+GAEKLRQMA++ DQF  QA TL+QG+IP +   K+LS FLG+IGQ LGRFGCYH
Subjt:  MSTDFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH

TYK27025.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.6e-2263.41Show/hide
Query:  MSTDFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH
        MS DF +W+DEY+ +R KYDD   ++E+GAEKLRQMA++ DQFL QA TL+QG+IP +   K+LS FLG+IGQ LGRFGCYH
Subjt:  MSTDFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH

TrEMBL top hitse value%identityAlignment
A0A5A7SM49 Glial fibrillary acidic protein-like4.3e-2160.98Show/hide
Query:  MSTDFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH
        MS DF +W+DEY+ +R KYDD   ++E+GAEKLRQMA + DQF  QA TL+QG+IP +   ++LS FLG+IGQ LGRFGCYH
Subjt:  MSTDFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH

A0A5A7TXA1 Glial fibrillary acidic protein-like3.3e-2160.98Show/hide
Query:  MSTDFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH
        MS DF +W+DEY+ +R KYDD   ++E+GAEKLRQMA++ DQF  QA TL+QG+IP +   K+LS FLG+IGQ LGRF CYH
Subjt:  MSTDFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH

A0A5A7VDD9 Glial fibrillary acidic protein-like3.9e-2262.2Show/hide
Query:  MSTDFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH
        MS DF +W+DEY+ +R KYDD   ++E+GAEKLRQMA++ DQF  QA TL+QG+IP +   K+LS FLG+IGQ LGRFGCYH
Subjt:  MSTDFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH

A0A5D3BQ93 Glial fibrillary acidic protein-like2.7e-2367.09Show/hide
Query:  DFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH
        DFAIWRDEY+IMRHKY+D + QIEQG +KLR MA+  DQF  + + LQQ I+PIQ  S++LSRFLG+IG YLG FGCYH
Subjt:  DFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH

A0A5D3DUN1 Glial fibrillary acidic protein-like7.8e-2363.41Show/hide
Query:  MSTDFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH
        MS DF +W+DEY+ +R KYDD   ++E+GAEKLRQMA++ DQFL QA TL+QG+IP +   K+LS FLG+IGQ LGRFGCYH
Subjt:  MSTDFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACAGATTTTGCGATATGGAGAGACGAATATGACATAATGAGACACAAATATGATGACACTAGAAATCAGATTGAACAAGGAGCTGAGAAATTAAGACAGATGGC
GAAAATGACAGATCAATTCTTAGCGCAAGCAATGACCCTCCAACAAGGCATCATACCTATACAGTGCAACAGCAAAAAGTTGTCTCGTTTCCTAGGGGTTATAGGGCAAT
ACCTCGGGCGTTTTGGGTGCTACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAACAGATTTTGCGATATGGAGAGACGAATATGACATAATGAGACACAAATATGATGACACTAGAAATCAGATTGAACAAGGAGCTGAGAAATTAAGACAGATGGC
GAAAATGACAGATCAATTCTTAGCGCAAGCAATGACCCTCCAACAAGGCATCATACCTATACAGTGCAACAGCAAAAAGTTGTCTCGTTTCCTAGGGGTTATAGGGCAAT
ACCTCGGGCGTTTTGGGTGCTACCATTAG
Protein sequenceShow/hide protein sequence
MSTDFAIWRDEYDIMRHKYDDTRNQIEQGAEKLRQMAKMTDQFLAQAMTLQQGIIPIQCNSKKLSRFLGVIGQYLGRFGCYH