; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G006760 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G006760
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCalcium-binding EF-hand
Genome locationchr05:8949268..8949609
RNA-Seq ExpressionLsi05G006760
SyntenyLsi05G006760
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site
IPR044205 - Calcium-binding protein KIC/PBP1/KRP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149304.1 calcium-binding protein KRP1 [Cucumis sativus]2.7e-5287.29Show/hide
Query:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD
        MAF+ E+SGF+DWLPTMA++LGGEGLIGELCNGFNLLM+REKGVIDFESLKRNAAALGL      DLRSMLREGDFDGDGALNQMEFCVLMFRLSP+LM+
Subjt:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD

Query:  ESWFLLEEALHQEFKDFC
        ESWFLLEEALHQEFKDFC
Subjt:  ESWFLLEEALHQEFKDFC

XP_008452312.1 PREDICTED: calcium-binding protein PBP1 [Cucumis melo]8.4e-5489.83Show/hide
Query:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD
        MAF+ E+SGF+DWLPTMA++LGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA     DLRSMLREGDFDGDGALNQMEFCVLMFRLSP+LMD
Subjt:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD

Query:  ESWFLLEEALHQEFKDFC
        ESWFLLEEALHQEFKDFC
Subjt:  ESWFLLEEALHQEFKDFC

XP_022929391.1 calcium-binding protein PBP1-like [Cucurbita moschata]5.6e-5084.75Show/hide
Query:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD
        MAF  +QSGF+DWLP MA++LGGEGLIGELCNGFNLL DREKGVIDFESLKRNAAALGLA     DLR MLREGDFDGDGALNQMEFCVLMFRLSP+LMD
Subjt:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD

Query:  ESWFLLEEALHQEFKDFC
        ESWFLLE+AL+QEFK FC
Subjt:  ESWFLLEEALHQEFKDFC

XP_022985275.1 calcium-binding protein PBP1 [Cucurbita maxima]5.2e-4883.76Show/hide
Query:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD
        MAF  +QSGF+DWLP MA++LGGEGLIGELCNGFNLL DREKGVIDF SLKRNAAALGLA     DLR MLREGDFDGDGALNQMEFCVLMFRLSP+LMD
Subjt:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD

Query:  ESWFLLEEALHQEFKDF
        ESWFLLE+AL QEFK F
Subjt:  ESWFLLEEALHQEFKDF

XP_038903612.1 calcium-binding protein KRP1-like [Benincasa hispida]2.9e-5492.37Show/hide
Query:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD
        MAF  EQSGFQDWLPTMAQ+LGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA     DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD
Subjt:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD

Query:  ESWFLLEEALHQEFKDFC
        ESWFLLEEAL+QEFKDFC
Subjt:  ESWFLLEEALHQEFKDFC

TrEMBL top hitse value%identityAlignment
A0A0A0L347 EF-hand domain-containing protein1.3e-5287.29Show/hide
Query:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD
        MAF+ E+SGF+DWLPTMA++LGGEGLIGELCNGFNLLM+REKGVIDFESLKRNAAALGL      DLRSMLREGDFDGDGALNQMEFCVLMFRLSP+LM+
Subjt:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD

Query:  ESWFLLEEALHQEFKDFC
        ESWFLLEEALHQEFKDFC
Subjt:  ESWFLLEEALHQEFKDFC

A0A1S3BSY1 calcium-binding protein PBP14.0e-5489.83Show/hide
Query:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD
        MAF+ E+SGF+DWLPTMA++LGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA     DLRSMLREGDFDGDGALNQMEFCVLMFRLSP+LMD
Subjt:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD

Query:  ESWFLLEEALHQEFKDFC
        ESWFLLEEALHQEFKDFC
Subjt:  ESWFLLEEALHQEFKDFC

A0A6J1CM41 calcium-binding protein PBP13.8e-4481.25Show/hide
Query:  QSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESWFLL
        +SGF DWLPTMA +LGGEGLIGELC+GF+LLMDREKGVIDFESLKRNAAALGL      DLR MLREGDFDGDGALNQMEFCVLMFRLSP+LMDES F L
Subjt:  QSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESWFLL

Query:  EEALHQEFKDFC
        ++AL  EF+DFC
Subjt:  EEALHQEFKDFC

A0A6J1EN05 calcium-binding protein PBP1-like2.7e-5084.75Show/hide
Query:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD
        MAF  +QSGF+DWLP MA++LGGEGLIGELCNGFNLL DREKGVIDFESLKRNAAALGLA     DLR MLREGDFDGDGALNQMEFCVLMFRLSP+LMD
Subjt:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD

Query:  ESWFLLEEALHQEFKDFC
        ESWFLLE+AL+QEFK FC
Subjt:  ESWFLLEEALHQEFKDFC

A0A6J1JAW3 calcium-binding protein PBP12.5e-4883.76Show/hide
Query:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD
        MAF  +QSGF+DWLP MA++LGGEGLIGELCNGFNLL DREKGVIDF SLKRNAAALGLA     DLR MLREGDFDGDGALNQMEFCVLMFRLSP+LMD
Subjt:  MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLA-----DLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMD

Query:  ESWFLLEEALHQEFKDF
        ESWFLLE+AL QEFK F
Subjt:  ESWFLLEEALHQEFKDF

SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP14.8e-3672.48Show/hide
Query:  QSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAA-LGLADL-----RSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESWFL
        Q  F D+LPTMA  LGGEGLIGELCNGF LLMDREKGVI FESL+RNAAA LGL DL     R M++EGDFD DGALNQMEFCVLMFRLSPDLM+ S  L
Subjt:  QSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAA-LGLADL-----RSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESWFL

Query:  LEEALHQEF
        + E + +EF
Subjt:  LEEALHQEF

Q2TBN3 Centrin-21.9e-0840.66Show/hide
Query:  TGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALG--LAD--LRSMLREGDFDGDGALNQMEFCVLMFRLS
        TG+ + F D+L  M QK+  +    E+   F L  D E G I F++LKR A  LG  L+D  L+ M+ E D DGDG +N+ EF  +M + S
Subjt:  TGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALG--LAD--LRSMLREGDFDGDGALNQMEFCVLMFRLS

Q9LSQ6 Calcium-binding protein PBP14.2e-3263.64Show/hide
Query:  EQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAA-ALGLADL-----RSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESWF
        ++  FQD+ PTMA KLGGEGLI E+C GF LLMD++KGVI FESL+RNA+  LGL DL     R M+ EGDFD DGALNQMEFCVLMFRLSP+LM+ S  
Subjt:  EQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAA-ALGLADL-----RSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESWF

Query:  LLEEALHQEF
        ++ E + +EF
Subjt:  LLEEALHQEF

Q9R1K9 Centrin-22.5e-0840.66Show/hide
Query:  TGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALG--LAD--LRSMLREGDFDGDGALNQMEFCVLMFRLS
        TG+ + F D+L  M QK+  +    E+   F L  D E G I F++LKR A  LG  L D  L+ M+ E D DGDG +N+ EF  +M + S
Subjt:  TGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALG--LAD--LRSMLREGDFDGDGALNQMEFCVLMFRLS

Q9ZPX9 Calcium-binding protein KIC3.2e-2450.91Show/hide
Query:  TGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGL-----ADLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESW
        T  ++ ++D LP MA+K+  E  + ELC GF+LL D E+ +I  ESL+RN+  LG+      D + M+REGD DGDGALNQ EFCVLM RLSP++M+++ 
Subjt:  TGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGL-----ADLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESW

Query:  FLLEEALHQE
          LE+AL QE
Subjt:  FLLEEALHQE

Arabidopsis top hitse value%identityAlignment
AT1G66410.1 calmodulin 46.5e-0433.33Show/hide
Query:  FQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALG--LAD--LRSMLREGDFDGDGALNQMEFCVLM
        F ++L  MA+K+       EL   F +    + G I    L+     LG  L D  +  M+RE D DGDG +N  EF  +M
Subjt:  FQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALG--LAD--LRSMLREGDFDGDGALNQMEFCVLM

AT2G46600.1 Calcium-binding EF-hand family protein2.3e-2550.91Show/hide
Query:  TGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGL-----ADLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESW
        T  ++ ++D LP MA+K+  E  + ELC GF+LL D E+ +I  ESL+RN+  LG+      D + M+REGD DGDGALNQ EFCVLM RLSP++M+++ 
Subjt:  TGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGL-----ADLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESW

Query:  FLLEEALHQE
          LE+AL QE
Subjt:  FLLEEALHQE

AT3G50360.1 centrin21.0e-0432.53Show/hide
Query:  FQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGL----ADLRSMLREGDFDGDGALNQMEFCVLMFR
        F +++  M  K+G      EL   F ++   + G I  + +KR A  LG     A++R M+ E D D DG +N  EF  +M R
Subjt:  FQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGL----ADLRSMLREGDFDGDGALNQMEFCVLMFR

AT4G27280.1 Calcium-binding EF-hand family protein3.4e-3772.48Show/hide
Query:  QSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAA-LGLADL-----RSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESWFL
        Q  F D+LPTMA  LGGEGLIGELCNGF LLMDREKGVI FESL+RNAAA LGL DL     R M++EGDFD DGALNQMEFCVLMFRLSPDLM+ S  L
Subjt:  QSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAA-LGLADL-----RSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESWFL

Query:  LEEALHQEF
        + E + +EF
Subjt:  LEEALHQEF

AT5G54490.1 pinoid-binding protein 13.0e-3363.64Show/hide
Query:  EQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAA-ALGLADL-----RSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESWF
        ++  FQD+ PTMA KLGGEGLI E+C GF LLMD++KGVI FESL+RNA+  LGL DL     R M+ EGDFD DGALNQMEFCVLMFRLSP+LM+ S  
Subjt:  EQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAA-ALGLADL-----RSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESWF

Query:  LLEEALHQEF
        ++ E + +EF
Subjt:  LLEEALHQEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTTACCGGAGAGCAATCAGGATTCCAGGACTGGCTGCCGACGATGGCGCAGAAGCTCGGCGGCGAGGGGCTGATCGGGGAGCTTTGCAATGGCTTCAATCTTCT
GATGGATAGAGAGAAGGGGGTGATCGATTTCGAGAGCCTGAAGAGGAACGCGGCGGCGCTAGGGCTGGCGGATCTGAGATCAATGTTGAGGGAGGGGGATTTCGACGGAG
ATGGTGCTCTTAATCAGATGGAGTTTTGTGTTCTTATGTTCAGATTGAGCCCTGATTTGATGGATGAGTCATGGTTCTTGCTCGAGGAGGCTCTACACCAAGAATTCAAG
GATTTTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATTTACCGGAGAGCAATCAGGATTCCAGGACTGGCTGCCGACGATGGCGCAGAAGCTCGGCGGCGAGGGGCTGATCGGGGAGCTTTGCAATGGCTTCAATCTTCT
GATGGATAGAGAGAAGGGGGTGATCGATTTCGAGAGCCTGAAGAGGAACGCGGCGGCGCTAGGGCTGGCGGATCTGAGATCAATGTTGAGGGAGGGGGATTTCGACGGAG
ATGGTGCTCTTAATCAGATGGAGTTTTGTGTTCTTATGTTCAGATTGAGCCCTGATTTGATGGATGAGTCATGGTTCTTGCTCGAGGAGGCTCTACACCAAGAATTCAAG
GATTTTTGTTGA
Protein sequenceShow/hide protein sequence
MAFTGEQSGFQDWLPTMAQKLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLRSMLREGDFDGDGALNQMEFCVLMFRLSPDLMDESWFLLEEALHQEFK
DFC