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Lsi05G006800 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G006800
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein PLANT CADMIUM RESISTANCE 8
Genome locationchr05:9029235..9029944
RNA-Seq ExpressionLsi05G006800
SyntenyLsi05G006800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452303.1 PREDICTED: protein PLANT CADMIUM RESISTANCE 8 [Cucumis melo]3.5e-2576.62Show/hide
Query:  MDRRPGSGYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFDCHEDETN
        MDR   +GYG  T+S QPGFSGP MYEANTG+ ATNYGG     E EFSGPTMYQANTVRG VWSTGLFDCHEDETN
Subjt:  MDRRPGSGYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFDCHEDETN

XP_011650553.1 protein PLANT CADMIUM RESISTANCE 8 [Cucumis sativus]3.9e-2475.32Show/hide
Query:  MDRRPGSGYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFDCHEDETN
        MDR   +GYG  T+S Q GFSGP MYEANTG+ ATNYGG     E EFSGPTMYQANTVRG VWSTGLFDCHEDETN
Subjt:  MDRRPGSGYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFDCHEDETN

XP_022152927.1 protein PLANT CADMIUM RESISTANCE 8 [Momordica charantia]1.0e-2480.82Show/hide
Query:  PGSGYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFDCHEDETN
        P  GYG NT S QPGFSGPTMY+AN  S A +Y GNTQ AE EFSGPTMYQANTVRGTVWSTGLFDCHEDETN
Subjt:  PGSGYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFDCHEDETN

XP_022992370.1 protein PLANT CADMIUM RESISTANCE 8 [Cucurbita maxima]9.6e-2359.81Show/hide
Query:  KRPISKLPRYKTHIAYSSLSRYFFCAEEQMDRRPGS-GYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFD
        KR  +   + +  I YS  S     A+ QMDR  GS GYG NT+  QPGF+GP+MY+ NTGS A N+   TQ+AE E  GPTMYQANTVRGTVWS+GLFD
Subjt:  KRPISKLPRYKTHIAYSSLSRYFFCAEEQMDRRPGS-GYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFD

Query:  CHEDETN
        CHEDETN
Subjt:  CHEDETN

XP_038904618.1 protein PLANT CADMIUM RESISTANCE 8-like [Benincasa hispida]4.0e-2984.42Show/hide
Query:  MDRRPGSGYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFDCHEDETN
        MDR  GSGYG N +S QPGFSGP MYEANTGS  TNYGGNTQ AE EFSGPTMYQ NTVRGTVWSTGLFDCHEDETN
Subjt:  MDRRPGSGYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFDCHEDETN

TrEMBL top hitse value%identityAlignment
A0A0A0L6I3 Uncharacterized protein1.9e-2475.32Show/hide
Query:  MDRRPGSGYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFDCHEDETN
        MDR   +GYG  T+S Q GFSGP MYEANTG+ ATNYGG     E EFSGPTMYQANTVRG VWSTGLFDCHEDETN
Subjt:  MDRRPGSGYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFDCHEDETN

A0A1S3BUC2 protein PLANT CADMIUM RESISTANCE 81.7e-2576.62Show/hide
Query:  MDRRPGSGYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFDCHEDETN
        MDR   +GYG  T+S QPGFSGP MYEANTG+ ATNYGG     E EFSGPTMYQANTVRG VWSTGLFDCHEDETN
Subjt:  MDRRPGSGYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFDCHEDETN

A0A5A7TVI4 Protein PLANT CADMIUM RESISTANCE 81.7e-2576.62Show/hide
Query:  MDRRPGSGYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFDCHEDETN
        MDR   +GYG  T+S QPGFSGP MYEANTG+ ATNYGG     E EFSGPTMYQANTVRG VWSTGLFDCHEDETN
Subjt:  MDRRPGSGYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFDCHEDETN

A0A6J1DHK7 protein PLANT CADMIUM RESISTANCE 85.0e-2580.82Show/hide
Query:  PGSGYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFDCHEDETN
        P  GYG NT S QPGFSGPTMY+AN  S A +Y GNTQ AE EFSGPTMYQANTVRGTVWSTGLFDCHEDETN
Subjt:  PGSGYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFDCHEDETN

A0A6J1JVI4 protein PLANT CADMIUM RESISTANCE 84.6e-2359.81Show/hide
Query:  KRPISKLPRYKTHIAYSSLSRYFFCAEEQMDRRPGS-GYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFD
        KR  +   + +  I YS  S     A+ QMDR  GS GYG NT+  QPGF+GP+MY+ NTGS A N+   TQ+AE E  GPTMYQANTVRGTVWS+GLFD
Subjt:  KRPISKLPRYKTHIAYSSLSRYFFCAEEQMDRRPGS-GYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEIEFSGPTMYQANTVRGTVWSTGLFD

Query:  CHEDETN
        CHEDETN
Subjt:  CHEDETN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAACCAATGTGCTGAGTGCTGGCATAGGCAGATTCTTGCTGAAGGGAAGTCAGTAAGGGCTGCTATGTCAACTATCCAACTGTTGTGGGAGGAACTCCTTAAAAG
ACCAATTTCCAAGCTACCAAGGTACAAAACACATATTGCATATTCATCTTTGAGTAGATACTTTTTTTGTGCTGAAGAACAGATGGATAGAAGGCCAGGCAGTGGTTATG
GTGTAAATACAGAATCTGGTCAACCTGGATTCTCAGGTCCAACCATGTATGAAGCAAATACAGGTAGCTCAGCTACTAATTATGGTGGGAATACACAACATGCTGAAATT
GAGTTCTCAGGTCCAACTATGTATCAGGCAAATACAGTCCGTGGGACTGTTTGGAGCACTGGATTGTTTGATTGCCATGAAGATGAGACAAATGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAAACCAATGTGCTGAGTGCTGGCATAGGCAGATTCTTGCTGAAGGGAAGTCAGTAAGGGCTGCTATGTCAACTATCCAACTGTTGTGGGAGGAACTCCTTAAAAG
ACCAATTTCCAAGCTACCAAGGTACAAAACACATATTGCATATTCATCTTTGAGTAGATACTTTTTTTGTGCTGAAGAACAGATGGATAGAAGGCCAGGCAGTGGTTATG
GTGTAAATACAGAATCTGGTCAACCTGGATTCTCAGGTCCAACCATGTATGAAGCAAATACAGGTAGCTCAGCTACTAATTATGGTGGGAATACACAACATGCTGAAATT
GAGTTCTCAGGTCCAACTATGTATCAGGCAAATACAGTCCGTGGGACTGTTTGGAGCACTGGATTGTTTGATTGCCATGAAGATGAGACAAATGGTTAG
Protein sequenceShow/hide protein sequence
MINQCAECWHRQILAEGKSVRAAMSTIQLLWEELLKRPISKLPRYKTHIAYSSLSRYFFCAEEQMDRRPGSGYGVNTESGQPGFSGPTMYEANTGSSATNYGGNTQHAEI
EFSGPTMYQANTVRGTVWSTGLFDCHEDETNG