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Lsi05G006810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G006810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCytochrome c-type biogenesis protein
Genome locationchr05:9031660..9032968
RNA-Seq ExpressionLsi05G006810
SyntenyLsi05G006810
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0032991 - protein-containing complex (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR005616 - CcmH/CycL/Ccl2/NrfF family
IPR038297 - CcmH/CycL/Ccl2/NrfF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149299.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis sativus]6.4e-7691.14Show/hide
Query:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA
        METDEDA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRD+IRSGK+DK+IYKKLENDYGETILYTPKFDLQTA LWLSPV+VAGAA 
Subjt:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ
        GVWAYSKHKQ+SNVHIMA NLVRGVPLTPKEKQTML+LLSPPP QR+ SSWWR+WRRQ
Subjt:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ

XP_008452301.1 PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo]1.3e-7693.04Show/hide
Query:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA
        ME DEDA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRD+IRSGKTDKEIYKKLENDYGETILYTPKFDLQTA LWLSPVLVAGAA 
Subjt:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ
        GVWAYSKHKQ+SNVHIMA NLVRGVPLTPKEKQTML+LLSPPP QR+ SSWWRSWRRQ
Subjt:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ

XP_022152937.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Momordica charantia]4.9e-7690.51Show/hide
Query:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA
        ME+++DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRD+IRSGK+DKEIY+KLE+DYGET+LYTPKFDLQTAALWLSPVLVAGAAA
Subjt:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ
        GVWAY+KHKQK+NVHIMA NLVRGVPLTPKEKQTML+LL+PPPPQR+ SSWWRSWRRQ
Subjt:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ

XP_022953979.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata]1.2e-7490.51Show/hide
Query:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA
        ME+D DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRD+IRSGK+DKEI+KKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA
Subjt:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ
        GVWAYSK+KQKSNVHIMA N+VRGVPLTP+EKQTML+LLSPPPPQR+ S WWR WR Q
Subjt:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ

XP_038904619.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida]1.9e-7594.77Show/hide
Query:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA
        METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRD+IRSGKTDKEIYKKLENDYGET+LYTPKFDLQTAALWLSPVLVAGAAA
Subjt:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWR
        GVWAYSKHKQ+SNVHIMA NLVRGVPLTPKEKQTML+LLSPPP QR++SSWWR
Subjt:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWR

TrEMBL top hitse value%identityAlignment
A0A0A0L351 Cytochrome c-type biogenesis protein3.1e-7691.14Show/hide
Query:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA
        METDEDA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRD+IRSGK+DK+IYKKLENDYGETILYTPKFDLQTA LWLSPV+VAGAA 
Subjt:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ
        GVWAYSKHKQ+SNVHIMA NLVRGVPLTPKEKQTML+LLSPPP QR+ SSWWR+WRRQ
Subjt:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ

A0A1S4DZT6 Cytochrome c-type biogenesis protein6.2e-7793.04Show/hide
Query:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA
        ME DEDA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRD+IRSGKTDKEIYKKLENDYGETILYTPKFDLQTA LWLSPVLVAGAA 
Subjt:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ
        GVWAYSKHKQ+SNVHIMA NLVRGVPLTPKEKQTML+LLSPPP QR+ SSWWRSWRRQ
Subjt:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ

A0A5A7TY95 Cytochrome c-type biogenesis protein6.2e-7793.04Show/hide
Query:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA
        ME DEDA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRD+IRSGKTDKEIYKKLENDYGETILYTPKFDLQTA LWLSPVLVAGAA 
Subjt:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ
        GVWAYSKHKQ+SNVHIMA NLVRGVPLTPKEKQTML+LLSPPP QR+ SSWWRSWRRQ
Subjt:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ

A0A6J1DHL6 Cytochrome c-type biogenesis protein2.4e-7690.51Show/hide
Query:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA
        ME+++DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRD+IRSGK+DKEIY+KLE+DYGET+LYTPKFDLQTAALWLSPVLVAGAAA
Subjt:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ
        GVWAY+KHKQK+NVHIMA NLVRGVPLTPKEKQTML+LL+PPPPQR+ SSWWRSWRRQ
Subjt:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ

A0A6J1JTI4 Cytochrome c-type biogenesis protein5.8e-7590.51Show/hide
Query:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA
        ME+D DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRD+IRSGK+DKEI+KKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA
Subjt:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ
        GVWAYSK+KQKSNVHIMA N+VRGVPLTP+EKQTML+LLSPPPPQR+ S WWR WR Q
Subjt:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ

SwissProt top hitse value%identityAlignment
B8AFK5 Cytochrome c-type biogenesis CcmH-like mitochondrial protein1.3e-6377.63Show/hide
Query:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA
        M T+ED VK+ Q++E+RARNISHNVRC ECGSQSIEDSQADIAILLRKLIRD+I+SGK+DKEIYKKL+ DYGETILYTPKFDLQTAA+WLSPV+V G AA
Subjt:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWW
        GVWAY KH+Q++NVHIMA NLVRGVPLTP+EK+TML++L+PPPP    + WW
Subjt:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWW

P45405 Cytochrome c-type biogenesis protein CcmH7.7e-1634.56Show/hide
Query:  DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALW-LSPVLVAGAAAGVWA
        D +      E RAR++S  +RC+ C +QSI+DS A +A  LR L+R+ I +G ++ ++   L   YGE +L  P+F+ QT  LW L P+L+ G    +W 
Subjt:  DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALW-LSPVLVAGAAAGVWA

Query:  YSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLS
          + + +S   + A       PLTP E+  +  L+S
Subjt:  YSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLS

P45406 Cytochrome c-type biogenesis protein CcmH7.2e-1435.51Show/hide
Query:  DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSP--VLVAGAAAGVW
        D V     +EARAR IS  +RC+ C +QSI+DS A++A  LR L+R+ +++G +D+ +   + + YGE +L  P+ + +T  LW  P  +LVAG    V 
Subjt:  DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSP--VLVAGAAAGVW

Query:  AYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSP
        A  +   +          V G PL+ +EK+ +  LL P
Subjt:  AYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSP

Q6K7S7 Cytochrome c-type biogenesis CcmH-like mitochondrial protein1.3e-6377.63Show/hide
Query:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA
        M T+ED VK+ Q++E+RARNISHNVRC ECGSQSIEDSQADIAILLRKLIRD+I+SGK+DKEIYKKL+ DYGETILYTPKFDLQTAA+WLSPV+V G AA
Subjt:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWW
        GVWAY KH+Q++NVHIMA NLVRGVPLTP+EK+TML++L+PPPP    + WW
Subjt:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWW

Q9XI46 Cytochrome c-type biogenesis CcmH-like mitochondrial protein6.7e-5265.38Show/hide
Query:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA
        ME  ++  KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR++I +GKTDKEIY KLE+++GET+LY PKFDLQTAALWL+PV++AG  A
Subjt:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPP-PPQRSTSSWWRSW
            Y KH+ + NV IMA NL+RGVPLTPKE+ T+L++L PP PP +   S  R W
Subjt:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPP-PPQRSTSSWWRSW

Arabidopsis top hitse value%identityAlignment
AT1G15220.1 cytochrome c biogenesis protein family4.7e-5365.38Show/hide
Query:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA
        ME  ++  KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR++I +GKTDKEIY KLE+++GET+LY PKFDLQTAALWL+PV++AG  A
Subjt:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPP-PPQRSTSSWWRSW
            Y KH+ + NV IMA NL+RGVPLTPKE+ T+L++L PP PP +   S  R W
Subjt:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPP-PPQRSTSSWWRSW

AT1G15220.2 cytochrome c biogenesis protein family4.7e-5365.38Show/hide
Query:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA
        ME  ++  KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR++I +GKTDKEIY KLE+++GET+LY PKFDLQTAALWL+PV++AG  A
Subjt:  METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPP-PPQRSTSSWWRSW
            Y KH+ + NV IMA NL+RGVPLTPKE+ T+L++L PP PP +   S  R W
Subjt:  GVWAYSKHKQKSNVHIMASNLVRGVPLTPKEKQTMLNLLSPP-PPQRSTSSWWRSW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTGATGAGGATGCTGTAAAAAAAACCCAGCTGGTGGAAGCCCGAGCAAGAAATATTAGTCATAATGTTAGGTGTATTGAGTGCGGTAGTCAATCCATTGAAGA
TTCACAAGCAGATATTGCGATTCTCCTCAGAAAGCTGATCCGTGATGATATTCGGTCTGGGAAAACGGACAAGGAAATCTATAAAAAGCTTGAGAATGATTATGGGGAGA
CGATTCTTTATACCCCAAAGTTTGACCTTCAAACTGCAGCATTATGGCTATCACCGGTGTTAGTGGCTGGTGCTGCTGCAGGAGTATGGGCTTATAGTAAGCACAAGCAA
AAGTCTAATGTTCACATCATGGCTTCAAATCTAGTCAGGGGTGTTCCATTGACCCCTAAAGAGAAACAAACCATGTTAAATCTCCTCTCACCTCCACCTCCTCAGAGAAG
CACTTCTTCATGGTGGAGGAGTTGGCGTAGGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACTGATGAGGATGCTGTAAAAAAAACCCAGCTGGTGGAAGCCCGAGCAAGAAATATTAGTCATAATGTTAGGTGTATTGAGTGCGGTAGTCAATCCATTGAAGA
TTCACAAGCAGATATTGCGATTCTCCTCAGAAAGCTGATCCGTGATGATATTCGGTCTGGGAAAACGGACAAGGAAATCTATAAAAAGCTTGAGAATGATTATGGGGAGA
CGATTCTTTATACCCCAAAGTTTGACCTTCAAACTGCAGCATTATGGCTATCACCGGTGTTAGTGGCTGGTGCTGCTGCAGGAGTATGGGCTTATAGTAAGCACAAGCAA
AAGTCTAATGTTCACATCATGGCTTCAAATCTAGTCAGGGGTGTTCCATTGACCCCTAAAGAGAAACAAACCATGTTAAATCTCCTCTCACCTCCACCTCCTCAGAGAAG
CACTTCTTCATGGTGGAGGAGTTGGCGTAGGCAATGA
Protein sequenceShow/hide protein sequence
METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDDIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAAGVWAYSKHKQ
KSNVHIMASNLVRGVPLTPKEKQTMLNLLSPPPPQRSTSSWWRSWRRQ