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Lsi05G006910 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G006910
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHepatitis A virus cellular receptor 1 like
Genome locationchr05:9184673..9187350
RNA-Seq ExpressionLsi05G006910
SyntenyLsi05G006910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046872.1 uncharacterized protein E6C27_scaffold230G00270 [Cucumis melo var. makuwa]7.4e-5581.76Show/hide
Query:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLNVKKPEEIKLVMDKMQAEMEETEAHKNK
        M+ V+ NNRIR LKDG  HRDLR+KI QFLTGVGKFAVDSTIFSSLKAVSGKNQ HKI +GGLKDT HSSSLN +KPEE+KLVMDKMQAEMEE E ++NK
Subjt:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLNVKKPEEIKLVMDKMQAEMEETEAHKNK

Query:  MK--QHHCTSAEIV-DDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL
        MK  QHHCTSAEIV DDSEPLKK PGE  KGSAN IQNKKRIFIRSRL
Subjt:  MK--QHHCTSAEIV-DDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL

KAG6577390.1 hypothetical protein SDJN03_24964, partial [Cucurbita argyrosperma subsp. sororia]1.8e-5681.38Show/hide
Query:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLNVKKPEEIKLVMDKMQAEMEETEAHKNK
        M+DV GNNRIR LKDGFHHRDLRTKII FL GVGKFAVDSTIF+SLKAVSG NQ +KI +GGLKD  HS SLN K+PEE+KLVMDKM AEMEE EA+KNK
Subjt:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLNVKKPEEIKLVMDKMQAEMEETEAHKNK

Query:  MKQHHCTSAEIVDDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL
        MK HHCTSA IVD S PLKKLPGEG KGSAN +QNKKRIFIRSRL
Subjt:  MKQHHCTSAEIVDDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL

XP_008452286.1 PREDICTED: uncharacterized protein LOC103493357 [Cucumis melo]2.6e-5582.43Show/hide
Query:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLNVKKPEEIKLVMDKMQAEMEETEAHKNK
        M+ V+ NNRIR LKDG  HRDLR+KI QFLTGVGKFAVDSTIFSSLKAVSGKNQ HKI +GGLKDT HSSSLN +KPEE+KLVMDKMQAEMEE E +KNK
Subjt:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLNVKKPEEIKLVMDKMQAEMEETEAHKNK

Query:  MK--QHHCTSAEIV-DDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL
        MK  QHHCTSAEIV DDSEPLKK PGE  KGSAN IQNKKRIFIRSRL
Subjt:  MK--QHHCTSAEIV-DDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL

XP_023552444.1 uncharacterized protein LOC111810104 [Cucurbita pepo subsp. pepo]6.7e-5681.38Show/hide
Query:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLNVKKPEEIKLVMDKMQAEMEETEAHKNK
        M+DVVGNNRIR L DGFHHRDLRTKII FL GVGKFAVDSTIF+SLKAVSG NQ +KI +GGLKDT HS SLN K+PEE+KLVMDKM AEMEE EA+KNK
Subjt:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLNVKKPEEIKLVMDKMQAEMEETEAHKNK

Query:  MKQHHCTSAEIVDDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL
        MK HHCTSA I D S PLKKLPGEG KGSAN +QNKKRIFIRSRL
Subjt:  MKQHHCTSAEIVDDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL

XP_038905013.1 uncharacterized protein LOC120091185 [Benincasa hispida]4.6e-6590.34Show/hide
Query:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLNVKKPEEIKLVMDKMQAEMEETEAHKNK
        M+DVVGNNRIR L+DGFHHRDLRTKIIQFLTGVGKFAVDST FSSLKAVSGKNQAHK+G GGLKDT HSSSLN KKPEE+KLV+DKMQAEME+TEA KNK
Subjt:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLNVKKPEEIKLVMDKMQAEMEETEAHKNK

Query:  MKQHHCTSAEIVDDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL
        MKQHHCTSAEIVDDSEPLKKLPGEG KGSAN IQNKKRIFIRSRL
Subjt:  MKQHHCTSAEIVDDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL

TrEMBL top hitse value%identityAlignment
A0A0A0L6J4 Uncharacterized protein2.6e-5377.07Show/hide
Query:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLN---------VKKPEEIKLVMDKMQAEM
        M+DV+GNNR RYLKD   HRD+RTKIIQFLTGVGKFAVDSTIFSSLKAVSGK++ HKI +GGLKDT +SSSLN         V KPEE+KLVMDKMQAEM
Subjt:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLN---------VKKPEEIKLVMDKMQAEM

Query:  EETEAHKNKMK--QHHCTSAEIV-DDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL
        EE E + NKMK  QHHCTSAEIV DDSEPLKK  GEG KGSAN IQNKKRIFIRSRL
Subjt:  EETEAHKNKMK--QHHCTSAEIV-DDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL

A0A1S3BUM3 uncharacterized protein LOC1034933571.2e-5582.43Show/hide
Query:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLNVKKPEEIKLVMDKMQAEMEETEAHKNK
        M+ V+ NNRIR LKDG  HRDLR+KI QFLTGVGKFAVDSTIFSSLKAVSGKNQ HKI +GGLKDT HSSSLN +KPEE+KLVMDKMQAEMEE E +KNK
Subjt:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLNVKKPEEIKLVMDKMQAEMEETEAHKNK

Query:  MK--QHHCTSAEIV-DDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL
        MK  QHHCTSAEIV DDSEPLKK PGE  KGSAN IQNKKRIFIRSRL
Subjt:  MK--QHHCTSAEIV-DDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL

A0A5D3BVT6 Uncharacterized protein3.6e-5581.76Show/hide
Query:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLNVKKPEEIKLVMDKMQAEMEETEAHKNK
        M+ V+ NNRIR LKDG  HRDLR+KI QFLTGVGKFAVDSTIFSSLKAVSGKNQ HKI +GGLKDT HSSSLN +KPEE+KLVMDKMQAEMEE E ++NK
Subjt:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLNVKKPEEIKLVMDKMQAEMEETEAHKNK

Query:  MK--QHHCTSAEIV-DDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL
        MK  QHHCTSAEIV DDSEPLKK PGE  KGSAN IQNKKRIFIRSRL
Subjt:  MK--QHHCTSAEIV-DDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL

A0A6J1CP03 uncharacterized protein LOC1110127753.1e-5178.38Show/hide
Query:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHK-IGEGGLKDTSHSSSLNVKKPEEIKLVMD-KMQAEMEETEAHK
        M DV G+ R R LKDGFHH DLR KIIQFLTGVGKFAVDSTIF+SL A +GKN+ HK I +GGLKD  HSSSLN KKPEE+KLVMD KMQAEMEE E  K
Subjt:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHK-IGEGGLKDTSHSSSLNVKKPEEIKLVMD-KMQAEMEETEAHK

Query:  NKMKQHHCTSAEIVDDSEPLKKLPGEGAKGSANAIQN-KKRIFIRSRL
        NKMKQHHCTSA IV  SEPLKK PGEGAKGSAN +QN KKRIFIRSRL
Subjt:  NKMKQHHCTSAEIVDDSEPLKKLPGEGAKGSANAIQN-KKRIFIRSRL

A0A7N2M8R1 Uncharacterized protein1.7e-2048.99Show/hide
Query:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLN-VKKPEEIKLVMDKMQAEMEETEAHKN
        M D V  +RIR LK+   + D R KI + LT +GKFAVDS +  SLKAV+G  Q H+I + G K    S SLN  KK E++KLVM+++QA MEET+   +
Subjt:  MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLN-VKKPEEIKLVMDKMQAEMEETEAHKN

Query:  KMKQHHCTSAEIVDDS---EPLKKLPGEGAKGSANAIQNKKRIFIRSRL
        K KQ +  SA+ V  S   EP KK P EG K       +KKR+FIRSRL
Subjt:  KMKQHHCTSAEIVDDS---EPLKKLPGEGAKGSANAIQNKKRIFIRSRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGACGTCGTCGGAAACAACCGTATTCGTTATCTAAAAGACGGCTTTCACCACCGTGACCTGCGGACGAAGATCATCCAGTTTCTCACCGGTGTTGGCAAGTTCGC
CGTGGACTCTACCATCTTCAGTTCTCTCAAGGCCGTCTCCGGTAAGAATCAGGCACATAAGATTGGTGAGGGAGGATTAAAGGATACGTCCCATTCATCCTCTTTAAATG
TAAAGAAACCGGAAGAGATTAAACTAGTGATGGATAAGATGCAGGCAGAGATGGAGGAAACAGAGGCACACAAGAATAAAATGAAGCAACACCATTGTACATCTGCAGAG
ATTGTTGATGATTCTGAACCACTGAAGAAGTTGCCAGGGGAAGGTGCCAAAGGATCAGCCAACGCAATTCAAAACAAGAAAAGGATCTTCATCCGTTCCCGACTGTAG
mRNA sequenceShow/hide mRNA sequence
CCGCTACATAATCGTACAACAGACCATCGTGAAGGGACAATTGGAGCCCAGATATTTTTGCTTCCACGTTGATTCATTTCGCCGCCGGCCCATTAAAATGAATGACGTCG
TCGGAAACAACCGTATTCGTTATCTAAAAGACGGCTTTCACCACCGTGACCTGCGGACGAAGATCATCCAGTTTCTCACCGGTGTTGGCAAGTTCGCCGTGGACTCTACC
ATCTTCAGTTCTCTCAAGGCCGTCTCCGGTAAGAATCAGGCACATAAGATTGGTGAGGGAGGATTAAAGGATACGTCCCATTCATCCTCTTTAAATGTAAAGAAACCGGA
AGAGATTAAACTAGTGATGGATAAGATGCAGGCAGAGATGGAGGAAACAGAGGCACACAAGAATAAAATGAAGCAACACCATTGTACATCTGCAGAGATTGTTGATGATT
CTGAACCACTGAAGAAGTTGCCAGGGGAAGGTGCCAAAGGATCAGCCAACGCAATTCAAAACAAGAAAAGGATCTTCATCCGTTCCCGACTGTAGACAATCTAGTTCATT
ATTGTACTAGAACAACAAGAATAATGGTTTCCTTTCTAGACAAGGTATGTAAGTTGTAGATAGAGAAATATTAGTTTATTACTTTATCATCATGTCTGAAGCTATGCATC
CAATATTTTATTTTCATGGATGGAATTCTTAGCAAGTTGTATACAAATCTCTCTCTTGTTCCTTCGTATGTATGTTTCTTTTTCTTAGATAAGAAACAATTTGATTGATA
GTATGAAATTACAAAAAAGGGAATCTTAGAGGGTAGTATAACTATAGATATGGAACAAGGGAGAGCATTTACACTAAGTTTGTGTTTCAATTGATCATTTGGCATTAATA
GTGTAAAATGAGACTAATATG
Protein sequenceShow/hide protein sequence
MNDVVGNNRIRYLKDGFHHRDLRTKIIQFLTGVGKFAVDSTIFSSLKAVSGKNQAHKIGEGGLKDTSHSSSLNVKKPEEIKLVMDKMQAEMEETEAHKNKMKQHHCTSAE
IVDDSEPLKKLPGEGAKGSANAIQNKKRIFIRSRL