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Lsi05G007290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G007290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLon N-terminal domain-containing protein
Genome locationchr05:9933909..9948507
RNA-Seq ExpressionLsi05G007290
SyntenyLsi05G007290
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004565 - beta-galactosidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS28385.1 hypothetical protein Acr_00g0001480 [Actinidia rufa]3.5e-1192.68Show/hide
Query:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRSTR
        +IQA GPVDPEQ+GVDLVAFAVDSNPDVDPTQLTGDSRSTR
Subjt:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRSTR
GFS28393.1 hypothetical protein Acr_00g0001530 [Actinidia rufa]3.5e-1192.68Show/hide
Query:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRSTR
        +IQA GPVDPEQ+GVDLVAFAVDSNPDVDPTQLTGDSRSTR
Subjt:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRSTR
GFS28793.1 hypothetical protein Acr_00g0004000 [Actinidia rufa]3.5e-1192.68Show/hide
Query:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRSTR
        +IQA GPVDPEQ+GVDLVAFAVDSNPDVDPTQLTGDSRSTR
Subjt:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRSTR
GFY85603.1 hypothetical protein Acr_04g0003410 [Actinidia rufa]1.3e-1092.5Show/hide
Query:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRST
        +IQA GPVDPEQ+GVDLVAFAVDSNPDVDPTQLTGDSRST
Subjt:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRST
GFY94925.1 glycoside hydrolase family 2 protein [Actinidia rufa]3.5e-1192.68Show/hide
Query:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRSTR
        +IQA GPVDPEQ+GVDLVAFAVDSNPDVDPTQLTGDSRSTR
Subjt:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRSTR
TrEMBL top hitse value%identityAlignment
A0A7J0D6K4 Uncharacterized protein1.7e-1192.68Show/hide
Query:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRSTR
        +IQA GPVDPEQ+GVDLVAFAVDSNPDVDPTQLTGDSRSTR
Subjt:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRSTR
A0A7J0D7A3 Uncharacterized protein1.7e-1192.68Show/hide
Query:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRSTR
        +IQA GPVDPEQ+GVDLVAFAVDSNPDVDPTQLTGDSRSTR
Subjt:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRSTR
A0A7J0D8G4 Uncharacterized protein1.7e-1192.68Show/hide
Query:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRSTR
        +IQA GPVDPEQ+GVDLVAFAVDSNPDVDPTQLTGDSRSTR
Subjt:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRSTR
A0A7J0EGK2 Uncharacterized protein6.4e-1192.5Show/hide
Query:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRST
        +IQA GPVDPEQ+GVDLVAFAVDSNPDVDPTQLTGDSRST
Subjt:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRST
A0A7J0F8B7 Beta-galactosidase1.7e-1192.68Show/hide
Query:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRSTR
        +IQA GPVDPEQ+GVDLVAFAVDSNPDVDPTQLTGDSRSTR
Subjt:  KIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRSTR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGAAATGATTATCGTACTGCTAGTGGTCTATCACCCAAATTGTTCTCATACCGGTGGGGTCATCGAGGTGCTAAAAGAGGAAATCGATCCCATGCCCAAATTTGC
AGTAACAGAAGTCATCACTTTCGACCTCAATAATAGATCCATTGTATTTGGATGGGATGGAGCGTTGCTCATCATAAACCTTAAATCAGGTTCACTTCGTAATGAGATGG
GGATAGAGTTAATCTATCAAACCTTAGCCCGCCGCTGTCACTGCTGCCGTCGACCTAACCCTACTCCGCTGCTGCTGCCGTCGACATCCTCGACGTCGACATCCTCATCT
GCAAGGTTGATTAACCGTACAAAGAATATACACGACGGGATTGACTCAACTCTGCCGCTGTCGAAGACTTCGTTCTGCTCTGGGACGTTTCAGCTTCCTATGAGCCTCAA
TGAAGAAGATGAAGAAGATGAAGAAAATGAAGAAGATGAAAGCCAGTATTGTTTTCAAGATCGGTTGTTGAAAATTCAAGCGTTCGGGCCAGTAGATCCAGAGCAAGTAG
GCGTTGACTTAGTTGCTTTTGCAGTGGATTCTAATCCCGATGTTGATCCGACGCAACTTACCGGTGATAGTCGCAGCACCAGGAGCTTTCAAGGGAGGCAGACATGTATA
TCTCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGATTGAAATGATTATCGTACTGCTAGTGGTCTATCACCCAAATTGTTCTCATACCGGTGGGGTCATCGAGGTGCTAAAAGAGGAAATCGATCCCATGCCCAAATTTGC
AGTAACAGAAGTCATCACTTTCGACCTCAATAATAGATCCATTGTATTTGGATGGGATGGAGCGTTGCTCATCATAAACCTTAAATCAGGTTCACTTCGTAATGAGATGG
GGATAGAGTTAATCTATCAAACCTTAGCCCGCCGCTGTCACTGCTGCCGTCGACCTAACCCTACTCCGCTGCTGCTGCCGTCGACATCCTCGACGTCGACATCCTCATCT
GCAAGGTTGATTAACCGTACAAAGAATATACACGACGGGATTGACTCAACTCTGCCGCTGTCGAAGACTTCGTTCTGCTCTGGGACGTTTCAGCTTCCTATGAGCCTCAA
TGAAGAAGATGAAGAAGATGAAGAAAATGAAGAAGATGAAAGCCAGTATTGTTTTCAAGATCGGTTGTTGAAAATTCAAGCGTTCGGGCCAGTAGATCCAGAGCAAGTAG
GCGTTGACTTAGTTGCTTTTGCAGTGGATTCTAATCCCGATGTTGATCCGACGCAACTTACCGGTGATAGTCGCAGCACCAGGAGCTTTCAAGGGAGGCAGACATGTATA
TCTCGATAG
Protein sequenceShow/hide protein sequence
MIEMIIVLLVVYHPNCSHTGGVIEVLKEEIDPMPKFAVTEVITFDLNNRSIVFGWDGALLIINLKSGSLRNEMGIELIYQTLARRCHCCRRPNPTPLLLPSTSSTSTSSS
ARLINRTKNIHDGIDSTLPLSKTSFCSGTFQLPMSLNEEDEEDEENEEDESQYCFQDRLLKIQAFGPVDPEQVGVDLVAFAVDSNPDVDPTQLTGDSRSTRSFQGRQTCI
SR