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Lsi05G007350 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G007350
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionIdentified as a screen for stress-responsive genes.
Genome locationchr05:10058108..10058641
RNA-Seq ExpressionLsi05G007350
SyntenyLsi05G007350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060595.1 hypothetical protein E6C27_scaffold22G004710 [Cucumis melo var. makuwa]7.9e-5979.07Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGF
        MADGYSKIKAACKFKSRSIDYSDLSSLPHSL FN AAVSNP S  S+ +RTNRP+EPPH  LPEE EE ++ E       TA  A LSRNSSVSSS SGF
Subjt:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGF

Query:  HSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSVMKKKKKKNAAGKIVRACK
         SAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDE+EGGDSKERG+ GGS +KKKKK NAAGKIVRA +
Subjt:  HSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSVMKKKKKKNAAGKIVRACK

KAG7015455.1 hypothetical protein SDJN02_23091, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-5977.47Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFN-AAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEY--EYGGATTTTATVAALSRNSSVSSSA
        MAD YSKIKAACKFKSRSIDYSDL+SLPHS RFN AAAVSNPNS DS+ N+TNR     H  LPEE EEE+E   EYGG    +A  AALSRN+SVSSS 
Subjt:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFN-AAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEY--EYGGATTTTATVAALSRNSSVSSSA

Query:  SGFHSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSV--MKKKKKKNAAGKIVRACKRIFGL
        SGFHSAVKRALSMRRSSSVAERYCRIHDQFAT ASPI+DDEME GDSKE  +TGGSV   KKKKKKN+AGKIVRACKR+FG+
Subjt:  SGFHSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSV--MKKKKKKNAAGKIVRACKRIFGL

KAG7031359.1 hypothetical protein SDJN02_05399, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-5876.84Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGF
        MAD YSKI+AACK KSRS+DYSDLSSLPHSLRF AAA SNPNS+DSD NRTNR REPPHGCLPE  EEEDEY     +  TAT + L RN SVS+SASGF
Subjt:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGF

Query:  HSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSVMKKKKKKNAAGKIVRACKRIFGL
        HSAVKRALSMRRSSSVAERY RIHDQF T ASPI+DDE+EG +SKE    GGSV  +KKK NAAGKIVRACKR+FGL
Subjt:  HSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSVMKKKKKKNAAGKIVRACKRIFGL

KGN56255.1 hypothetical protein Csa_011668 [Cucumis sativus]6.7e-5876.4Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGF
        MADGYSKIKAA KFKSRSIDYSDLSSLPHSL F+AA         S+P RTNRP+EPPHG LPEE EE ++ E       T   A L RNSSVSSS SGF
Subjt:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGF

Query:  HSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGS-VMKKKKKKNAAGKIVRACKRIFGL
         SAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGD KERG+ GGS + KKKKKKNAA KIVRACKRIFGL
Subjt:  HSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGS-VMKKKKKKNAAGKIVRACKRIFGL

XP_022929198.1 uncharacterized protein LOC111435863 [Cucurbita moschata]2.3e-5876.92Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFN-AAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEY--EYGGATTTTATVAALSRNSSVSSSA
        MAD YSKIKAACKFKSRSIDYSDL+SLPHS RFN AAAVSNPNS DS+ N+TNR     H  LPEE EEE+E   EYGG    +A  AALSRN+SVSSS 
Subjt:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFN-AAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEY--EYGGATTTTATVAALSRNSSVSSSA

Query:  SGFHSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSV--MKKKKKKNAAGKIVRACKRIFGL
        SGFHSAVKRALSMRRSSSVAERYCRIHDQFAT ASPI+DDEME GDSKE  +TGGSV   KKKKKKN+A KIVRACKR+FG+
Subjt:  SGFHSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSV--MKKKKKKNAAGKIVRACKRIFGL

TrEMBL top hitse value%identityAlignment
A0A0A0L2N9 Uncharacterized protein3.2e-5876.4Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGF
        MADGYSKIKAA KFKSRSIDYSDLSSLPHSL F+AA         S+P RTNRP+EPPHG LPEE EE ++ E       T   A L RNSSVSSS SGF
Subjt:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGF

Query:  HSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGS-VMKKKKKKNAAGKIVRACKRIFGL
         SAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGD KERG+ GGS + KKKKKKNAA KIVRACKRIFGL
Subjt:  HSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGS-VMKKKKKKNAAGKIVRACKRIFGL

A0A5A7V402 Uncharacterized protein3.8e-5979.07Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGF
        MADGYSKIKAACKFKSRSIDYSDLSSLPHSL FN AAVSNP S  S+ +RTNRP+EPPH  LPEE EE ++ E       TA  A LSRNSSVSSS SGF
Subjt:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGF

Query:  HSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSVMKKKKKKNAAGKIVRACK
         SAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDE+EGGDSKERG+ GGS +KKKKK NAAGKIVRA +
Subjt:  HSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSVMKKKKKKNAAGKIVRACK

A0A5N6QLE4 Uncharacterized protein7.8e-2047.43Show/hide
Query:  DGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGFHS
        +GYSK+KA    KSRS+D+SD           A + S     +SDP  T++P E   G   +E   E E   GG        A LSR+ SVSS+ SGF S
Subjt:  DGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGFHS

Query:  AVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSVMKKKKKKNAAGKIVRACKRIFGL
        AVKRA S++RSSSV+ERYCRI+DQ  T ASPI+DD+ EG D+    R        KKKK+  GKI++ACKR+FGL
Subjt:  AVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSVMKKKKKKNAAGKIVRACKRIFGL

A0A6J1C4C9 uncharacterized protein LOC1110083711.7e-5474.86Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNS--QDSDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSAS
        MADGYSKIKAACKFKSRSIDYSDL+SLPHSL+F  AAV NPNS   +SD NR NR R     CLPE  EEEDEY  GG       VAALSRNSSVSSSAS
Subjt:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNS--QDSDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSAS

Query:  GFHSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSVMKKKKKKNAAGKIVRACKRIFGL
        G HSAVKRALSMRRSSSVAERYCRIHDQFAT ASPI+D+E+  GDSKE  ++ GSV  ++KKKNAAGKIVRACKR+FGL
Subjt:  GFHSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSVMKKKKKKNAAGKIVRACKRIFGL

A0A6J1ERE9 uncharacterized protein LOC1114358631.1e-5876.92Show/hide
Query:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFN-AAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEY--EYGGATTTTATVAALSRNSSVSSSA
        MAD YSKIKAACKFKSRSIDYSDL+SLPHS RFN AAAVSNPNS DS+ N+TNR     H  LPEE EEE+E   EYGG    +A  AALSRN+SVSSS 
Subjt:  MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFN-AAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEY--EYGGATTTTATVAALSRNSSVSSSA

Query:  SGFHSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSV--MKKKKKKNAAGKIVRACKRIFGL
        SGFHSAVKRALSMRRSSSVAERYCRIHDQFAT ASPI+DDEME GDSKE  +TGGSV   KKKKKKN+A KIVRACKR+FG+
Subjt:  SGFHSAVKRALSMRRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSV--MKKKKKKNAAGKIVRACKRIFGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G24275.1 Identified as a screen for stress-responsive genes.1.5e-1040.44Show/hide
Query:  SDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGFHSAVKRALSMRRSSSVAERYCRIHDQFATFASPI---EDDEMEGG
        S  + T++  EP H  +  ++++ D                LSRN SVS+SA    S +K  +SMRRSSSV+ERYCRI+DQ +    P+   E DE E  
Subjt:  SDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGFHSAVKRALSMRRSSSVAERYCRIHDQFATFASPI---EDDEMEGG

Query:  DSKERGRTGGSVMKKKKKKNAAGK-IVRACKRIFGL
        D KE+      V KKKK  N   K  V+ACKR FG+
Subjt:  DSKERGRTGGSVMKKKKKKNAAGK-IVRACKRIFGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATGGCTATTCCAAAATCAAAGCCGCCTGCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCTCCTCCCTTCCTCACTCTCTTAGATTCAACGCCGCCGC
CGTCTCCAATCCAAACTCTCAAGATTCCGATCCGAATCGAACGAATCGACCGCGGGAGCCACCGCACGGCTGCTTACCGGAGGAAGTAGAAGAAGAAGACGAATACGAAT
ATGGCGGAGCCACCACCACCACCGCCACCGTGGCTGCGCTTAGTCGAAACAGCTCTGTTTCTTCATCTGCTTCGGGATTTCACTCGGCAGTGAAGAGAGCTTTATCGATG
CGGAGATCTTCATCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACATTTGCATCGCCGATCGAGGATGATGAAATGGAAGGTGGAGATTCGAAGGAAAG
GGGAAGAACAGGAGGATCTGTGATGAAGAAGAAGAAGAAGAAGAACGCGGCAGGGAAAATCGTTAGAGCATGTAAGCGAATTTTTGGACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATGGCTATTCCAAAATCAAAGCCGCCTGCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCTCCTCCCTTCCTCACTCTCTTAGATTCAACGCCGCCGC
CGTCTCCAATCCAAACTCTCAAGATTCCGATCCGAATCGAACGAATCGACCGCGGGAGCCACCGCACGGCTGCTTACCGGAGGAAGTAGAAGAAGAAGACGAATACGAAT
ATGGCGGAGCCACCACCACCACCGCCACCGTGGCTGCGCTTAGTCGAAACAGCTCTGTTTCTTCATCTGCTTCGGGATTTCACTCGGCAGTGAAGAGAGCTTTATCGATG
CGGAGATCTTCATCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACATTTGCATCGCCGATCGAGGATGATGAAATGGAAGGTGGAGATTCGAAGGAAAG
GGGAAGAACAGGAGGATCTGTGATGAAGAAGAAGAAGAAGAAGAACGCGGCAGGGAAAATCGTTAGAGCATGTAAGCGAATTTTTGGACTGTAA
Protein sequenceShow/hide protein sequence
MADGYSKIKAACKFKSRSIDYSDLSSLPHSLRFNAAAVSNPNSQDSDPNRTNRPREPPHGCLPEEVEEEDEYEYGGATTTTATVAALSRNSSVSSSASGFHSAVKRALSM
RRSSSVAERYCRIHDQFATFASPIEDDEMEGGDSKERGRTGGSVMKKKKKKNAAGKIVRACKRIFGL