; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G007520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G007520
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRING-type domain-containing protein
Genome locationchr05:10388968..10389540
RNA-Seq ExpressionLsi05G007520
SyntenyLsi05G007520
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33914.1 hypothetical protein [Cucumis melo subsp. melo]4.1e-6181.13Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD
        MIPQAL+VPQSNPPPSILPFLTAFS+V V+FISIIIFSVVASFAIIIFIY+IC+YLIG T+LD H  DLEAGE  ENQRMI R RIL++HHQTS+ HGRD
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD

Query:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV
         MER ESN WRE +ERT+M+EKV APVSYGSSE VAKCIDCAICLEDFENGELCQ FP+
Subjt:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV

KAA0060638.1 putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa]7.6e-8484.29Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD
        MIPQAL+VPQSNPPPSILPFLTAFS+V V+FISIIIFSVVASFAIIIFIY+IC+YLIG T+LD H  DLEAGE  ENQRMI R RIL++HHQTS+ HGRD
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD

Query:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDNC
         MER ESN WRE +ERT+M+EKV APVSYGSSE VAKCIDCAICLEDFENGELCQ FPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND C
Subjt:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDNC

KAG6600727.1 putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia]7.2e-5863.82Show/hide
Query:  MIPQAL-SVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGR
        MIPQAL +VPQSNPPPS LPFLTAFS+V V+ ISI+IFS++ASF+IIIFI+V+CQYLIG TNLDGH  D+EAGER +NQ    RGR LVS          
Subjt:  MIPQAL-SVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGR

Query:  DMERFESNAWREALERTV---------MVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDN
           R+ESN WREALERT+         +V K+   V YG SE  AK  DCAICLE+FENGE CQIF VC HIFHYSCIQ WL++NMTCPICR  I N N
Subjt:  DMERFESNAWREALERTV---------MVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDN

TYK02232.1 putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa]1.8e-6181.76Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD
        MIPQAL+VPQSNPPPSILPFLTAFS+V V+FISIIIFSVVASFAIIIFIY+IC+YLIG T+LD H  DLEAGE  ENQRMI R RIL++HHQTS+ HGRD
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD

Query:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV
         MER ESN WRE +ERT+M+EKV APVSYGSSE VAKCIDCAICLEDFENGELCQ FPV
Subjt:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV

XP_011652743.1 uncharacterized protein LOC105435076 [Cucumis sativus]2.0e-6052.79Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD
        MIPQAL+VPQSNPPPSILPFLTAFS+V V+FI+IIIFSVVASFAII+ IYVIC+YLIG T+LDGH  +LEAGE  ENQ MI R RIL++HHQTS+ HGRD
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD

Query:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQ---------------------------------------------
         MER ESNAWRE +ERT+M+EKV APVSYGSSEA  KCIDCAICLEDFENGELCQ                                             
Subjt:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQ---------------------------------------------

Query:  --------------------------------------IFPVCNHIFHYSCIQHWLKKNMTCPICRCSI
                                              +FP C HIFH  CI +WL+ N TCPICR  +
Subjt:  --------------------------------------IFPVCNHIFHYSCIQHWLKKNMTCPICRCSI

TrEMBL top hitse value%identityAlignment
A0A0A0L6M6 RING-type domain-containing protein1.3e-8183.07Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD
        MIPQAL+VPQSNPPPSILPFLTAFS+V V+FI+IIIFSVVASFAII+ IYVIC+YLIG T+LDGH  +LEAGE  ENQ MI R RIL++HHQTS+ HGRD
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD

Query:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND
         MER ESNAWRE +ERT+M+EKV APVSYGSSEA  KCIDCAICLEDFENGELCQ FPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND
Subjt:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND

A0A5A7UZF7 Putative RING-H2 finger protein ATL193.7e-8484.29Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD
        MIPQAL+VPQSNPPPSILPFLTAFS+V V+FISIIIFSVVASFAIIIFIY+IC+YLIG T+LD H  DLEAGE  ENQRMI R RIL++HHQTS+ HGRD
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD

Query:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDNC
         MER ESN WRE +ERT+M+EKV APVSYGSSE VAKCIDCAICLEDFENGELCQ FPVCNHIFHYSCIQHWLKKNMTCPICRCSIVND C
Subjt:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDNC

A0A5D3BTV2 Putative RING-H2 finger protein ATL198.9e-6281.76Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD
        MIPQAL+VPQSNPPPSILPFLTAFS+V V+FISIIIFSVVASFAIIIFIY+IC+YLIG T+LD H  DLEAGE  ENQRMI R RIL++HHQTS+ HGRD
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD

Query:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV
         MER ESN WRE +ERT+M+EKV APVSYGSSE VAKCIDCAICLEDFENGELCQ FPV
Subjt:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV

A0A7N2L6L4 RING-type domain-containing protein2.8e-2337.82Show/hide
Query:  MIPQALSVPQSNPPP--SILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQ-RMIPRGRILVSHHQTSTDH
        M+PQA   P   PPP   IL F+    +  + ++ II+ SVV    I++ I  IC     P+N +    DLE GER+ +Q   IP     + + +     
Subjt:  MIPQALSVPQSNPPP--SILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQ-RMIPRGRILVSHHQTSTDH

Query:  GRDMERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDNC
           +E     + R   E+   +EK+   V+YGS E  + C  C ICLEDF+NG+ CQ+FP CNH+FH +CI +WLKK+ TCPICR  ++  +C
Subjt:  GRDMERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDNC

E5GBS2 Uncharacterized protein2.0e-6181.13Show/hide
Query:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD
        MIPQAL+VPQSNPPPSILPFLTAFS+V V+FISIIIFSVVASFAIIIFIY+IC+YLIG T+LD H  DLEAGE  ENQRMI R RIL++HHQTS+ HGRD
Subjt:  MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRD

Query:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV
         MER ESN WRE +ERT+M+EKV APVSYGSSE VAKCIDCAICLEDFENGELCQ FP+
Subjt:  -MERFESNAWREALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPV

SwissProt top hitse value%identityAlignment
Q8W571 RING-H2 finger protein ATL323.4e-1034.69Show/hide
Query:  SHHQTSTDHGRDMERFESNAWREALERTVMVE-KVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSI
        S+  +ST + R+    + ++ R  L+  V+    V A  S   S+  +K ++CAICL + E+ E  ++ P+CNH+FH  CI  WL  + TCP+CR ++
Subjt:  SHHQTSTDHGRDMERFESNAWREALERTVMVE-KVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSI

Q9C919 Putative RING-H2 finger protein ATL198.1e-1231.49Show/hide
Query:  SNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGP---TNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRDMERFESN
        S+     +  ++   +   + + I++  ++A+ A+I+ IYVI   ++ P   T LD    DLE G     QR   R RI+  H   ST  G  +  FE  
Subjt:  SNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGP---TNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRDMERFESN

Query:  AWREALERTVMVEKVTAPVSYG------SSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICR
          +  L+++V +E +   +  G        E   +  +CAICL  +   E C++FPVC HI+H  CI  WLK ++TCP CR
Subjt:  AWREALERTVMVEKVTAPVSYG------SSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICR

Q9LF64 RING-H2 finger protein ATL525.2e-1133.33Show/hide
Query:  HHQTSTDHGRDM----ERFESNAWREALE----RTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPIC
        HHQTS+    ++    E F S+  R +         M++ +T    Y S +      DC++CL +FE  E  ++ P CNH FH  CI  WLK +  CP+C
Subjt:  HHQTSTDHGRDM----ERFESNAWREALE----RTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPIC

Query:  RCSIVNDN
        R  +   N
Subjt:  RCSIVNDN

Q9LZV8 RING-H2 finger protein ATL745.2e-1147.46Show/hide
Query:  YGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV
        YGS E      +CAICL +F +GE  ++ P CNH FH SCI  WL  + +CP CR S++
Subjt:  YGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV

Q9SRQ8 RING-H2 finger protein ATL513.4e-1035.44Show/hide
Query:  EALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDN
        E+L +++ V K      Y   +   +  DC++CL +F+  E  ++ P CNH FH  CI  WLK +  CP+CR  IV  +
Subjt:  EALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDN

Arabidopsis top hitse value%identityAlignment
AT1G53010.1 RING/U-box superfamily protein5.8e-1331.49Show/hide
Query:  SNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGP---TNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRDMERFESN
        S+     +  ++   +   + + I++  ++A+ A+I+ IYVI   ++ P   T LD    DLE G     QR   R RI+  H   ST  G  +  FE  
Subjt:  SNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGP---TNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRDMERFESN

Query:  AWREALERTVMVEKVTAPVSYG------SSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICR
          +  L+++V +E +   +  G        E   +  +CAICL  +   E C++FPVC HI+H  CI  WLK ++TCP CR
Subjt:  AWREALERTVMVEKVTAPVSYG------SSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICR

AT3G03550.1 RING/U-box superfamily protein2.4e-1135.44Show/hide
Query:  EALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDN
        E+L +++ V K      Y   +   +  DC++CL +F+  E  ++ P CNH FH  CI  WLK +  CP+CR  IV  +
Subjt:  EALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDN

AT3G18930.1 RING/U-box superfamily protein2.4e-1144.44Show/hide
Query:  AVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV
        + A C DCA+CL +FE G+  +  P+C H FH  CI  WL+ +  CP+CR +I+
Subjt:  AVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV

AT5G01880.1 RING/U-box superfamily protein3.7e-1247.46Show/hide
Query:  YGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV
        YGS E      +CAICL +F +GE  ++ P CNH FH SCI  WL  + +CP CR S++
Subjt:  YGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIV

AT5G17600.1 RING/U-box superfamily protein3.7e-1233.33Show/hide
Query:  HHQTSTDHGRDM----ERFESNAWREALE----RTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPIC
        HHQTS+    ++    E F S+  R +         M++ +T    Y S +      DC++CL +FE  E  ++ P CNH FH  CI  WLK +  CP+C
Subjt:  HHQTSTDHGRDM----ERFESNAWREALE----RTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPIC

Query:  RCSIVNDN
        R  +   N
Subjt:  RCSIVNDN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCCTCAAGCTCTTAGTGTTCCACAATCCAACCCTCCTCCTTCAATCCTCCCTTTCCTCACCGCATTTTCGGTCGTATTCGTCGTCTTCATCTCCATCATCATCTT
CTCCGTGGTCGCATCCTTTGCAATCATCATCTTCATCTATGTCATTTGCCAATACCTAATTGGGCCGACGAATTTAGACGGACACGGTCCCGACCTCGAAGCAGGTGAGA
GAGTCGAAAACCAAAGAATGATCCCAAGGGGTAGGATTTTGGTATCTCATCATCAAACAAGTACTGATCATGGGAGAGACATGGAGAGGTTTGAAAGCAATGCATGGAGG
GAGGCTTTGGAGAGAACAGTAATGGTAGAGAAAGTGACGGCGCCGGTGAGCTATGGGAGCTCCGAGGCGGTGGCGAAATGCATTGATTGTGCAATTTGTTTGGAAGATTT
TGAAAATGGAGAGCTTTGCCAGATTTTTCCAGTGTGTAATCACATTTTTCATTATTCTTGTATTCAACATTGGTTGAAGAAGAACATGACTTGTCCCATTTGTCGTTGTT
CTATTGTCAATGACAACTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCCCTCAAGCTCTTAGTGTTCCACAATCCAACCCTCCTCCTTCAATCCTCCCTTTCCTCACCGCATTTTCGGTCGTATTCGTCGTCTTCATCTCCATCATCATCTT
CTCCGTGGTCGCATCCTTTGCAATCATCATCTTCATCTATGTCATTTGCCAATACCTAATTGGGCCGACGAATTTAGACGGACACGGTCCCGACCTCGAAGCAGGTGAGA
GAGTCGAAAACCAAAGAATGATCCCAAGGGGTAGGATTTTGGTATCTCATCATCAAACAAGTACTGATCATGGGAGAGACATGGAGAGGTTTGAAAGCAATGCATGGAGG
GAGGCTTTGGAGAGAACAGTAATGGTAGAGAAAGTGACGGCGCCGGTGAGCTATGGGAGCTCCGAGGCGGTGGCGAAATGCATTGATTGTGCAATTTGTTTGGAAGATTT
TGAAAATGGAGAGCTTTGCCAGATTTTTCCAGTGTGTAATCACATTTTTCATTATTCTTGTATTCAACATTGGTTGAAGAAGAACATGACTTGTCCCATTTGTCGTTGTT
CTATTGTCAATGACAACTGCTGA
Protein sequenceShow/hide protein sequence
MIPQALSVPQSNPPPSILPFLTAFSVVFVVFISIIIFSVVASFAIIIFIYVICQYLIGPTNLDGHGPDLEAGERVENQRMIPRGRILVSHHQTSTDHGRDMERFESNAWR
EALERTVMVEKVTAPVSYGSSEAVAKCIDCAICLEDFENGELCQIFPVCNHIFHYSCIQHWLKKNMTCPICRCSIVNDNC