; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G007570 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G007570
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein NRT1/ PTR FAMILY 4.3-like
Genome locationchr05:10535504..10540804
RNA-Seq ExpressionLsi05G007570
SyntenyLsi05G007570
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsIPR000109 - Proton-dependent oligopeptide transporter family
IPR036259 - MFS transporter superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133734.1 protein NRT1/ PTR FAMILY 4.3 [Cucumis sativus]1.2e-4885.95Show/hide
Query:  MEMERERKRDFKVESHTNIPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGF
        MEMER++ RD K E+H     +DVSVDWRGRPSNPTSHGGMRAA FVLG+Q FEIMAIAAVGNNLITYL+NEMHFSLSKSANIVTNFVGTVFLLALLGGF
Subjt:  MEMERERKRDFKVESHTNIPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGF

Query:  LSDSYLGSFWTILIFGFVELS
        LSDSYLGSFWT+LIFGFVELS
Subjt:  LSDSYLGSFWTILIFGFVELS

XP_022929221.1 protein NRT1/ PTR FAMILY 4.3-like isoform X1 [Cucurbita moschata]2.6e-4885.48Show/hide
Query:  MERERKRDFKVESHTN-----IPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALL
        ME ER+RDFK E++ N     +PSEDV+VDWRGRPSN  SHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYL+NEMHFSLSKSANIVTNFVGTVFLLAL+
Subjt:  MERERKRDFKVESHTN-----IPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALL

Query:  GGFLSDSYLGSFWTILIFGFVELS
        GGFLSDSYLGSFWT+LIFGFVELS
Subjt:  GGFLSDSYLGSFWTILIFGFVELS

XP_022985329.1 protein NRT1/ PTR FAMILY 4.3-like isoform X1 [Cucurbita maxima]1.6e-4886.89Show/hide
Query:  MERERKRDFKVESHTN---IPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGG
        ME ER+RDFK E++ N   +PSEDV+VDWRGRPSN  SHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYL+NEMHFSLSKSANIVTNFVGTVFLLAL+GG
Subjt:  MERERKRDFKVESHTN---IPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGG

Query:  FLSDSYLGSFWTILIFGFVELS
        FLSDSYLGSFWT+LIFGFVELS
Subjt:  FLSDSYLGSFWTILIFGFVELS

XP_023552004.1 protein NRT1/ PTR FAMILY 4.3-like [Cucurbita pepo subsp. pepo]1.6e-4886.89Show/hide
Query:  MERERKRDFKVESHTN---IPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGG
        ME ER+RDFK E++ N   +PSEDV+VDWRGRPSN  SHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYL+NEMHFSLSKSANIVTNFVGTVFLLAL+GG
Subjt:  MERERKRDFKVESHTN---IPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGG

Query:  FLSDSYLGSFWTILIFGFVELS
        FLSDSYLGSFWT+LIFGFVELS
Subjt:  FLSDSYLGSFWTILIFGFVELS

XP_038903187.1 protein NRT1/ PTR FAMILY 4.3-like [Benincasa hispida]4.7e-5396.64Show/hide
Query:  MERERKRDFKVESHTNIPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLS
        ME ERKRDFK ESHT IPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYL+NEMHFSLSKSANIVTNFVGTVFLLALLGGFLS
Subjt:  MERERKRDFKVESHTNIPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLS

Query:  DSYLGSFWTILIFGFVELS
        DSYLGSFWTILIFGFVELS
Subjt:  DSYLGSFWTILIFGFVELS

TrEMBL top hitse value%identityAlignment
A0A0A0L2Q8 Uncharacterized protein5.7e-4985.95Show/hide
Query:  MEMERERKRDFKVESHTNIPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGF
        MEMER++ RD K E+H     +DVSVDWRGRPSNPTSHGGMRAA FVLG+Q FEIMAIAAVGNNLITYL+NEMHFSLSKSANIVTNFVGTVFLLALLGGF
Subjt:  MEMERERKRDFKVESHTNIPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGF

Query:  LSDSYLGSFWTILIFGFVELS
        LSDSYLGSFWT+LIFGFVELS
Subjt:  LSDSYLGSFWTILIFGFVELS

A0A1S3CSK9 protein NRT1/ PTR FAMILY 4.3-like1.4e-4784.3Show/hide
Query:  MEMERERKRDFKVESHTNIPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGF
        MEME ++ RD K E+H     +DVSVDWRGRPSNPT HGGMRAA FVLG+Q FEIMAIAAVGNNLITYL+NEMHFSLSKSANIVTNFVGTVFLLALLGGF
Subjt:  MEMERERKRDFKVESHTNIPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGF

Query:  LSDSYLGSFWTILIFGFVELS
        LSDSYLGSFWT+LIFGFVELS
Subjt:  LSDSYLGSFWTILIFGFVELS

A0A6J1EMI3 protein NRT1/ PTR FAMILY 4.3-like isoform X11.3e-4885.48Show/hide
Query:  MERERKRDFKVESHTN-----IPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALL
        ME ER+RDFK E++ N     +PSEDV+VDWRGRPSN  SHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYL+NEMHFSLSKSANIVTNFVGTVFLLAL+
Subjt:  MERERKRDFKVESHTN-----IPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALL

Query:  GGFLSDSYLGSFWTILIFGFVELS
        GGFLSDSYLGSFWT+LIFGFVELS
Subjt:  GGFLSDSYLGSFWTILIFGFVELS

A0A6J1JCZ7 protein NRT1/ PTR FAMILY 4.3-like isoform X17.5e-4986.89Show/hide
Query:  MERERKRDFKVESHTN---IPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGG
        ME ER+RDFK E++ N   +PSEDV+VDWRGRPSN  SHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYL+NEMHFSLSKSANIVTNFVGTVFLLAL+GG
Subjt:  MERERKRDFKVESHTN---IPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGG

Query:  FLSDSYLGSFWTILIFGFVELS
        FLSDSYLGSFWT+LIFGFVELS
Subjt:  FLSDSYLGSFWTILIFGFVELS

A0A6J1JRW4 protein NRT1/ PTR FAMILY 4.3-like2.4e-4782.93Show/hide
Query:  MEMEMERERKRDFKVESHTNIPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLG
        MEMEM+ ER+RD  +     +PSED++VDWRGRPSNP +HGGMRAAAFVLGLQ+FEIMAIAAVGNNLITY++NEMHFSLSKSAN+VTNFVGTVFLLALLG
Subjt:  MEMEMERERKRDFKVESHTNIPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLG

Query:  GFLSDSYLGSFWTILIFGFVELS
        GFLSDSYLGSFWT+LIFGFVELS
Subjt:  GFLSDSYLGSFWTILIFGFVELS

SwissProt top hitse value%identityAlignment
Q56XQ6 Protein NRT1/ PTR FAMILY 4.44.9e-3773.83Show/hide
Query:  HTNIPS-EDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWTILI
        HT+  S +D+ VD+RGRP  P+ HGG RAA FVLG QAFE+MAIAAVGNNLITY+ NEMHF LSKSAN+VTNF+GTVFLL+LLGGFLSDSYLGSF T+L+
Subjt:  HTNIPS-EDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWTILI

Query:  FGFVELS
        FG +E+S
Subjt:  FGFVELS

Q8H157 Protein NRT1/ PTR FAMILY 4.61.1e-1753.76Show/hide
Query:  DWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWTILIFGFVE
        DWR R +    HGGM AA+FVL ++  E +A  A  +NL+ YL   MH S SKSAN VTNF+GT FLLALLGGFLSD++  +F   LI   +E
Subjt:  DWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWTILIFGFVE

Q8VYE4 Protein NRT1/ PTR FAMILY 4.55.6e-1743.52Show/hide
Query:  KVESHTNIPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWT
        +VE H ++   +   DWR + +    HGGM AA+FVL ++  E +A  A  +NL+ YL N MH SL++S++ VT F+ T FLLALLGGFL+D++  +F  
Subjt:  KVESHTNIPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWT

Query:  ILIFGFVE
         LI   +E
Subjt:  ILIFGFVE

Q93VV5 Protein NRT1/ PTR FAMILY 4.36.6e-4282.18Show/hide
Query:  SEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWTILIFGFVEL
        +E+ SVDWRGRPSNP  HGGMRAA FVLGLQAFEIM IAAVGNNLITY++NEMHF LSK+ANIVTNFVGT+F+ ALLGG+LSD++LGSFWTI+IFGFVEL
Subjt:  SEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWTILIFGFVEL

Query:  S
        S
Subjt:  S

Q9SZY4 Protein NRT1/ PTR FAMILY 6.21.0e-1850.53Show/hide
Query:  SVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWTILIFGFVE
        +VD++GRP++ +  GG   AA +LG++  E ++   +  NL+TYLM  MH   S SANIVT+F+GT FLL LLGGFL+DS+LG F TI IF  ++
Subjt:  SVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWTILIFGFVE

Arabidopsis top hitse value%identityAlignment
AT1G27040.1 Major facilitator superfamily protein4.0e-1843.52Show/hide
Query:  KVESHTNIPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWT
        +VE H ++   +   DWR + +    HGGM AA+FVL ++  E +A  A  +NL+ YL N MH SL++S++ VT F+ T FLLALLGGFL+D++  +F  
Subjt:  KVESHTNIPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWT

Query:  ILIFGFVE
         LI   +E
Subjt:  ILIFGFVE

AT1G33440.1 Major facilitator superfamily protein3.5e-3873.83Show/hide
Query:  HTNIPS-EDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWTILI
        HT+  S +D+ VD+RGRP  P+ HGG RAA FVLG QAFE+MAIAAVGNNLITY+ NEMHF LSKSAN+VTNF+GTVFLL+LLGGFLSDSYLGSF T+L+
Subjt:  HTNIPS-EDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWTILI

Query:  FGFVELS
        FG +E+S
Subjt:  FGFVELS

AT1G59740.1 Major facilitator superfamily protein4.7e-4382.18Show/hide
Query:  SEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWTILIFGFVEL
        +E+ SVDWRGRPSNP  HGGMRAA FVLGLQAFEIM IAAVGNNLITY++NEMHF LSK+ANIVTNFVGT+F+ ALLGG+LSD++LGSFWTI+IFGFVEL
Subjt:  SEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWTILIFGFVEL

Query:  S
        S
Subjt:  S

AT1G69850.1 nitrate transporter 1:28.0e-1953.76Show/hide
Query:  DWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWTILIFGFVE
        DWR R +    HGGM AA+FVL ++  E +A  A  +NL+ YL   MH S SKSAN VTNF+GT FLLALLGGFLSD++  +F   LI   +E
Subjt:  DWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWTILIFGFVE

AT2G26690.1 Major facilitator superfamily protein7.2e-2050.53Show/hide
Query:  SVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWTILIFGFVE
        +VD++GRP++ +  GG   AA +LG++  E ++   +  NL+TYLM  MH   S SANIVT+F+GT FLL LLGGFL+DS+LG F TI IF  ++
Subjt:  SVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGSFWTILIFGFVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGGAGATGGAAAGGGAAAGAAAGAGAGATTTCAAGGTGGAGAGCCATACCAATATCCCATCTGAAGATGTCTCTGTTGATTGGAGAGGAAGACCCTCCAACCC
GACCTCCCACGGCGGAATGAGAGCGGCTGCTTTTGTTCTCGGGCTGCAAGCGTTTGAGATAATGGCGATTGCTGCGGTTGGGAACAATTTGATAACATATTTGATGAATG
AGATGCACTTTTCACTGTCAAAATCTGCAAACATAGTGACAAACTTTGTTGGGACAGTGTTTCTTTTGGCCCTTCTTGGTGGTTTCCTTTCTGATTCTTATCTTGGGAGC
TTTTGGACCATTCTTATCTTTGGCTTTGTTGAACTTTCTGATATTAAATTC
mRNA sequenceShow/hide mRNA sequence
AGCCAACTAGAAGTTTGCCTCAGATTCAGCTGGAAGAAGAAGAGACTTTATTTGATTTCTATCTTGTAATGGAAATGGAGATGGAAAGGGAAAGAAAGAGAGATTTCAAG
GTGGAGAGCCATACCAATATCCCATCTGAAGATGTCTCTGTTGATTGGAGAGGAAGACCCTCCAACCCGACCTCCCACGGCGGAATGAGAGCGGCTGCTTTTGTTCTCGG
GCTGCAAGCGTTTGAGATAATGGCGATTGCTGCGGTTGGGAACAATTTGATAACATATTTGATGAATGAGATGCACTTTTCACTGTCAAAATCTGCAAACATAGTGACAA
ACTTTGTTGGGACAGTGTTTCTTTTGGCCCTTCTTGGTGGTTTCCTTTCTGATTCTTATCTTGGGAGCTTTTGGACCATTCTTATCTTTGGCTTTGTTGAACTTTCTGAT
ATTAAATTC
Protein sequenceShow/hide protein sequence
MEMEMERERKRDFKVESHTNIPSEDVSVDWRGRPSNPTSHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYLMNEMHFSLSKSANIVTNFVGTVFLLALLGGFLSDSYLGS
FWTILIFGFVELSDIKF