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Lsi05G007980 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G007980
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:11676225..11685567
RNA-Seq ExpressionLsi05G007980
SyntenyLsi05G007980
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domainsIPR036549 - Cytochrome c oxidase, subunit VIb superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A0L3H4 Uncharacterized protein1.1e-3487.64Show/hide
Query:  MYKKIPPATETLRDSKPPAIGILKSSQTCQDFSDRPLPSQPKTKHNGKSFKEFANCCERTDTETQDDSKCQRLLEAEKMLLVRLGVPSR
        MYKKIPPATETLRDSKPPAIG+LKSSQTCQDFSDRPLPSQPKTKHNGKSFKEF NC ERTDT   DDSKCQ+LLEAEKML  +L VPSR
Subjt:  MYKKIPPATETLRDSKPPAIGILKSSQTCQDFSDRPLPSQPKTKHNGKSFKEFANCCERTDTETQDDSKCQRLLEAEKMLLVRLGVPSR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGTGACATGGAAAATAAACCCTGTAGCATGTACAAGAAAATTCCTCCTGCAACTGAGACATTGAGGGACTCGAAACCACCCGCCATTGGAATACTCAAAAGCTC
ACAAACCTGCCAGGATTTCTCAGACAGACCACTCCCTTCACAACCCAAAACCAAGCACAATGGAAAATCTTTCAAAGAATTTGCAAACTGTTGCGAAAGGACAGATACAG
AAACTCAAGATGATTCCAAGTGCCAGAGACTATTGGAAGCTGAAAAGATGCTCCTCGTGAGGCTCGGAGTGCCTTCTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGTGACATGGAAAATAAACCCTGTAGCATGTACAAGAAAATTCCTCCTGCAACTGAGACATTGAGGGACTCGAAACCACCCGCCATTGGAATACTCAAAAGCTC
ACAAACCTGCCAGGATTTCTCAGACAGACCACTCCCTTCACAACCCAAAACCAAGCACAATGGAAAATCTTTCAAAGAATTTGCAAACTGTTGCGAAAGGACAGATACAG
AAACTCAAGATGATTCCAAGTGCCAGAGACTATTGGAAGCTGAAAAGATGCTCCTCGTGAGGCTCGGAGTGCCTTCTCGTTGA
Protein sequenceShow/hide protein sequence
MIGDMENKPCSMYKKIPPATETLRDSKPPAIGILKSSQTCQDFSDRPLPSQPKTKHNGKSFKEFANCCERTDTETQDDSKCQRLLEAEKMLLVRLGVPSR