CuGenDBv2

Gene ID	Lsi05G008170
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic
Genome location	chr05:12650471..12652414
RNA-Seq Expression	Lsi05G008170
Synteny	Lsi05G008170
Gene Ontology terms	GO:0022900 - electron transport chain (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009507 - chloroplast (cellular component) GO:0009579 - thylakoid (cellular component) GO:0005506 - iron ion binding (molecular function) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

ALI90146.1 NdhK, partial [Icacina mannii]

3.5e-15

67.14

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Query:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS--LLKLFSNTKVQSLPTN
        + KK+SREIYEDRI+SQ ENRC TTNHKF+VG SIHTGNYDQG LY    +S  L + F   KVQ LPTN
Subjt:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS--LLKLFSNTKVQSLPTN

ALI90148.1 NdhK, partial [Iodes klaineana]

1.0e-14

65.71

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Query:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS--LLKLFSNTKVQSLPTN
        + KK+SRE+YEDRI+SQ ENRC TT HKFNVG SIHTGNYDQG LY    +S  L + F   KVQ LPTN
Subjt:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS--LLKLFSNTKVQSLPTN

ALI90156.1 NdhK, partial [Merrilliodendron megacarpum]

3.5e-15

67.14

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Query:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS--LLKLFSNTKVQSLPTN
        + KK+SREIYEDRI+SQ ENRC TTNHKF+VG SIHTGNYDQG LY    +S  L + F   KVQ LPTN
Subjt:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS--LLKLFSNTKVQSLPTN

YP_009233003.1 NdhK [Ligusticum tenuissimum]

1.1e-16

71.83

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Query:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSSLL---KLFSNTKVQSLPTN
        + KKISREIYEDRIKSQ ENRC TTNHKF VG SIHTGNYD+  LY    +S +   K FSNTKVQSLPTN
Subjt:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSSLL---KLFSNTKVQSLPTN

YP_009751910.1 NADH dehydrogenase subunit K [Cyclanthera pedata]

1.0e-14

84.62

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Query:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS
        + KKISREIYEDRIKSQEENRC TTNHKFNVG S HTGNYDQGLLY  Q SS
Subjt:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS

TrEMBL top hits

e value

%identity

Alignment

A0A0S0ZI96 NdhK (Fragment)

1.7e-15

67.14

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Query:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS--LLKLFSNTKVQSLPTN
        + KK+SREIYEDRI+SQ ENRC TTNHKF+VG SIHTGNYDQG LY    +S  L + F   KVQ LPTN
Subjt:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS--LLKLFSNTKVQSLPTN

A0A0S0ZI99 NdhK (Fragment)

1.7e-15

67.14

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Query:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS--LLKLFSNTKVQSLPTN
        + KK+SREIYEDRI+SQ ENRC TTNHKF+VG SIHTGNYDQG LY    +S  L + F   KVQ LPTN
Subjt:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS--LLKLFSNTKVQSLPTN

A0A0X8DBB1 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

5.3e-17

71.83

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Query:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSSLL---KLFSNTKVQSLPTN
        + KKISREIYEDRIKSQ ENRC TTNHKF VG SIHTGNYD+  LY    +S +   K FSNTKVQSLPTN
Subjt:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSSLL---KLFSNTKVQSLPTN

X2F2Q8 NADH-plastoquinone oxidoreductase subunit K (Fragment)

5.0e-15

91.3

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Query:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLY
        + KKISREIYEDRIKSQEENRC TTNHKFNVG SIHTGNYDQGLLY
Subjt:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLY

X2F4L4 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

5.0e-15

91.3

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Query:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLY
        + KKISREIYEDRIKSQEENRC TTNHKFNVG SIHTGNYDQGLLY
Subjt:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLY

SwissProt top hits

e value

%identity

Alignment

B0Z4L3 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

4.3e-16

76.92

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Query:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS
        + KKISREIYEDRI+SQEENRC TTNHKF+VG S+HTGNYD GLLY L  +S
Subjt:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS

B0Z4U7 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

4.3e-16

76.92

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Query:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS
        + KKISREIYEDRI+SQEENRC TTNHKF+VG S+HTGNYD GLLY L  +S
Subjt:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS

B0Z531 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

4.3e-16

76.92

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Query:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS
        + KKISREIYEDRI+SQEENRC TTNHKF+VG S+HTGNYD GLLY L  +S
Subjt:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS

B0Z5B5 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

4.3e-16

76.92

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Query:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS
        + KKISREIYEDRI+SQEENRC TTNHKF+VG S+HTGNYD GLLY L  +S
Subjt:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS

Q9MTP4 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic

4.3e-16

76.92

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Query:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS
        + KKISREIYEDRI+SQEENRC TTNHKF+VG S+HTGNYD GLLY L  +S
Subjt:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSS

Arabidopsis top hits

e value

%identity

Alignment

ATCG00430.1 photosystem II reaction center protein G

2.5e-11

67.39

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Query:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLY
        + KKI+REIY+DRI+ Q+ NRC TTNHKF V  S H GNYDQ LLY
Subjt:  MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLY

Sequences

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CDS sequence

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ATGACCAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAGAATCGGTGTTGTACTACCAACCACAAATTTAATGTTGGCTCAAGTATTCATAC
TGGAAATTACGATCAAGGATTACTCTATCTACTTCAGAGATCATCCCTCTTGAAACTTTTTTCAAATACAAAAGTGCAGTCTCTTCCTACGAATTAG

mRNA sequence

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Protein sequence

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MTKKISREIYEDRIKSQEENRCCTTNHKFNVGSSIHTGNYDQGLLYLLQRSSLLKLFSNTKVQSLPTN

Lsi05G008170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome