; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G008240 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G008240
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTransposon, En/Spm-like protein
Genome locationchr05:13121041..13125974
RNA-Seq ExpressionLsi05G008240
SyntenyLsi05G008240
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032748.1 hypothetical protein E6C27_scaffold853G00910 [Cucumis melo var. makuwa]4.6e-4051.15Show/hide
Query:  MSSRSFGPRNRSRSNSNVNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDS
        MSSR+FG RNRSRS+SN+N+ +++N++S GEQEV SI+S +Q               SSSTKTKG+GATR VGLEKYV+ NG   I+I+ EDRKP+    
Subjt:  MSSRSFGPRNRSRSNSNVNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDS

Query:  SKLNSQIGKELRAIVPLDCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSP---------------IGLIYVIDGKERTLSV
              + KE+        KR       NYFILD++EP+VQDYL+HEMSVL+RDFRCSLHK+YK+YDSP               IG++YVID  E+TL V
Subjt:  SKLNSQIGKELRAIVPLDCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSP---------------IGLIYVIDGKERTLSV

Query:  FLKQL---RLLFHSLIE
         LKQ+    L FHS IE
Subjt:  FLKQL---RLLFHSLIE

KAA0035606.1 Transposon, En/Spm-like protein [Cucumis melo var. makuwa]1.1e-3651.71Show/hide
Query:  MSSRSFGPRNRSRSNSNVNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDS
        +SSR+FG  NRSRS+SNVN+ N++N++S GEQEV SI+S +Q               SSSTKTKGR ATRGVGLEKYV+ANG I I+I+ EDRKP+ KDS
Subjt:  MSSRSFGPRNRSRSNSNVNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDS

Query:  SKLNSQIGKELRAIVPLDCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPIGLIYVIDGKERTLSVFLKQL---RLLFHSL
        SKLNSQI KE+R +VPL+C+ WSDVSKE          V ++ +D  +S+ H +       T + ++  IGL+Y+I G E+TL V LKQ+    L FHS 
Subjt:  SKLNSQIGKELRAIVPLDCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPIGLIYVIDGKERTLSVFLKQL---RLLFHSL

Query:  IEVGL
        IE+ L
Subjt:  IEVGL

KAA0046978.1 formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]3.4e-3552.97Show/hide
Query:  VNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDSSKLNSQIGKELRAIVPL
        +N+ N++N++S GEQEV SI+S +Q               SSSTKTKGRGATRGVGLEKYV+ANG I I+I+ EDRKP+CKDSSKLNSQIGKE+RAIVPL
Subjt:  VNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDSSKLNSQIGKELRAIVPL

Query:  DCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPIGLIYVIDGKERTLSVFLKQL---RLLFHSLIE
        +C+ WSDVSKE          V ++ +D  +S+ H +       T + ++  IGL+YVIDG E+ L V LKQ+    L FHS IE
Subjt:  DCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPIGLIYVIDGKERTLSVFLKQL---RLLFHSLIE

TYJ98779.1 hypothetical protein E5676_scaffold156G00880 [Cucumis melo var. makuwa]4.6e-4051.15Show/hide
Query:  MSSRSFGPRNRSRSNSNVNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDS
        MSSR+FG RNRSRS+SN+N+ +++N++S GEQEV SI+S +Q               SSSTKTKG+GATR VGLEKYV+ NG   I+I+ EDRKP+    
Subjt:  MSSRSFGPRNRSRSNSNVNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDS

Query:  SKLNSQIGKELRAIVPLDCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSP---------------IGLIYVIDGKERTLSV
              + KE+        KR       NYFILD++EP+VQDYL+HEMSVL+RDFRCSLHK+YK+YDSP               IG++YVID  E+TL V
Subjt:  SKLNSQIGKELRAIVPLDCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSP---------------IGLIYVIDGKERTLSV

Query:  FLKQL---RLLFHSLIE
         LKQ+    L FHS IE
Subjt:  FLKQL---RLLFHSLIE

TYK04806.1 formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]8.3e-4255.45Show/hide
Query:  MSSRSFGPRNRSRSNSNVNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDS
        MSSR+FGP NRSRS+SN+N+ N++N++S GEQEV SI+S +Q               SSSTKTKGRGATRGVGLEKYV+ANG I I+I+ EDRKP+CKDS
Subjt:  MSSRSFGPRNRSRSNSNVNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDS

Query:  SKLNSQIGKELRAIVPLDCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPIGLIYVIDGKERTLSVFLKQL---RLLFHSL
        SKLNSQIGKE+RAIVPL+C+ WSDVSKE          V ++ +D  +S+ H +       T + ++  IGL+YVIDG E+ L V LKQ+    L FHS 
Subjt:  SKLNSQIGKELRAIVPLDCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPIGLIYVIDGKERTLSVFLKQL---RLLFHSL

Query:  IE
        IE
Subjt:  IE

TrEMBL top hitse value%identityAlignment
A0A5A7SQC8 DUF4218 domain-containing protein2.2e-4051.15Show/hide
Query:  MSSRSFGPRNRSRSNSNVNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDS
        MSSR+FG RNRSRS+SN+N+ +++N++S GEQEV SI+S +Q               SSSTKTKG+GATR VGLEKYV+ NG   I+I+ EDRKP+    
Subjt:  MSSRSFGPRNRSRSNSNVNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDS

Query:  SKLNSQIGKELRAIVPLDCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSP---------------IGLIYVIDGKERTLSV
              + KE+        KR       NYFILD++EP+VQDYL+HEMSVL+RDFRCSLHK+YK+YDSP               IG++YVID  E+TL V
Subjt:  SKLNSQIGKELRAIVPLDCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSP---------------IGLIYVIDGKERTLSV

Query:  FLKQL---RLLFHSLIE
         LKQ+    L FHS IE
Subjt:  FLKQL---RLLFHSLIE

A0A5A7T089 Transposon, En/Spm-like protein5.1e-3751.71Show/hide
Query:  MSSRSFGPRNRSRSNSNVNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDS
        +SSR+FG  NRSRS+SNVN+ N++N++S GEQEV SI+S +Q               SSSTKTKGR ATRGVGLEKYV+ANG I I+I+ EDRKP+ KDS
Subjt:  MSSRSFGPRNRSRSNSNVNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDS

Query:  SKLNSQIGKELRAIVPLDCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPIGLIYVIDGKERTLSVFLKQL---RLLFHSL
        SKLNSQI KE+R +VPL+C+ WSDVSKE          V ++ +D  +S+ H +       T + ++  IGL+Y+I G E+TL V LKQ+    L FHS 
Subjt:  SKLNSQIGKELRAIVPLDCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPIGLIYVIDGKERTLSVFLKQL---RLLFHSL

Query:  IEVGL
        IE+ L
Subjt:  IEVGL

A0A5A7TVR8 Formin-like protein 4 isoform X21.6e-3552.97Show/hide
Query:  VNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDSSKLNSQIGKELRAIVPL
        +N+ N++N++S GEQEV SI+S +Q               SSSTKTKGRGATRGVGLEKYV+ANG I I+I+ EDRKP+CKDSSKLNSQIGKE+RAIVPL
Subjt:  VNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDSSKLNSQIGKELRAIVPL

Query:  DCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPIGLIYVIDGKERTLSVFLKQL---RLLFHSLIE
        +C+ WSDVSKE          V ++ +D  +S+ H +       T + ++  IGL+YVIDG E+ L V LKQ+    L FHS IE
Subjt:  DCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPIGLIYVIDGKERTLSVFLKQL---RLLFHSLIE

A0A5D3BIG6 DUF4218 domain-containing protein2.2e-4051.15Show/hide
Query:  MSSRSFGPRNRSRSNSNVNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDS
        MSSR+FG RNRSRS+SN+N+ +++N++S GEQEV SI+S +Q               SSSTKTKG+GATR VGLEKYV+ NG   I+I+ EDRKP+    
Subjt:  MSSRSFGPRNRSRSNSNVNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDS

Query:  SKLNSQIGKELRAIVPLDCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSP---------------IGLIYVIDGKERTLSV
              + KE+        KR       NYFILD++EP+VQDYL+HEMSVL+RDFRCSLHK+YK+YDSP               IG++YVID  E+TL V
Subjt:  SKLNSQIGKELRAIVPLDCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSP---------------IGLIYVIDGKERTLSV

Query:  FLKQL---RLLFHSLIE
         LKQ+    L FHS IE
Subjt:  FLKQL---RLLFHSLIE

A0A5D3C2Z5 Formin-like protein 4 isoform X24.0e-4255.45Show/hide
Query:  MSSRSFGPRNRSRSNSNVNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDS
        MSSR+FGP NRSRS+SN+N+ N++N++S GEQEV SI+S +Q               SSSTKTKGRGATRGVGLEKYV+ANG I I+I+ EDRKP+CKDS
Subjt:  MSSRSFGPRNRSRSNSNVNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDS

Query:  SKLNSQIGKELRAIVPLDCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPIGLIYVIDGKERTLSVFLKQL---RLLFHSL
        SKLNSQIGKE+RAIVPL+C+ WSDVSKE          V ++ +D  +S+ H +       T + ++  IGL+YVIDG E+ L V LKQ+    L FHS 
Subjt:  SKLNSQIGKELRAIVPLDCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPIGLIYVIDGKERTLSVFLKQL---RLLFHSL

Query:  IE
        IE
Subjt:  IE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCAAGAAGTTTCGGACCAAGAAATCGTAGTAGGTCCAATTCAAATGTTAACCAAACAAATTCAAATAATGAAGATTCTACTGGCGAGCAAGAAGTTGGG
TCGATAAATTCAAGTGTTCAAGTTTCCTATAACATTAGATGTATTAATATTGATATTTCTCATGCAAGTTCTAGTACTAAAACTAAAGGCCGAGGAGCGACTAGA
GGGGTTGGACTTGAGAAATATGTCCGAGCAAATGGTCGCATTGCTATTAAAATTGAACTCGAAGATAGAAAACCGGTTTGTAAGGACTCGTCCAAATTGAACTCT
CAAATTGGAAAAGAGCTACGTGCAATAGTACCTCTTGACTGCAAACGTTGGTCAGATGTCTCCAAAGAGAATTACTTCATTCTAGACTTGGATGAACCTGTGGTA
CAAGATTATCTTGATCACGAGATGAGTGTACTACACAGAGACTTTCGTTGTTCACTACACAAAACCTATAAACAGTACGACTCTCCAATTGGGCTCATTTATGTG
ATCGATGGGAAAGAGAGGACTTTAAGCGTATTTCTAAAGCAACTACGGCTGCTCTTCCATTCACTCATAGAGGTGGGACTGCGACATTTTTACGTCATAAGCGGA
AAAAGTCATAAAGCCACAGGCATAGGC
mRNA sequenceShow/hide mRNA sequence
GATGTCGTCAAGAAGTTTCGGACCAAGAAATCGTAGTAGGTCCAATTCAAATGTTAACCAAACAAATTCAAATAATGAAGATTCTACTGGCGAGCAAGAAGTTGG
GTCGATAAATTCAAGTGTTCAAGTTTCCTATAACATTAGATGTATTAATATTGATATTTCTCATGCAAGTTCTAGTACTAAAACTAAAGGCCGAGGAGCGACTAG
AGGGGTTGGACTTGAGAAATATGTCCGAGCAAATGGTCGCATTGCTATTAAAATTGAACTCGAAGATAGAAAACCGGTTTGTAAGGACTCGTCCAAATTGAACTC
TCAAATTGGAAAAGAGCTACGTGCAATAGTACCTCTTGACTGCAAACGTTGGTCAGATGTCTCCAAAGAGAATTACTTCATTCTAGACTTGGATGAACCTGTGGT
ACAAGATTATCTTGATCACGAGATGAGTGTACTACACAGAGACTTTCGTTGTTCACTACACAAAACCTATAAACAGTACGACTCTCCAATTGGGCTCATTTATGT
GATCGATGGGAAAGAGAGGACTTTAAGCGTATTTCTAAAGCAACTACGGCTGCTCTTCCATTCACTCATAGAGGTGGGACTGCGACATTTTTACGTCATAAGCGG
AAAAAGTCATAAAGCCACAGGCATAGGC
Protein sequenceShow/hide protein sequence
MSSRSFGPRNRSRSNSNVNQTNSNNEDSTGEQEVGSINSSVQVSYNIRCINIDISHASSSTKTKGRGATRGVGLEKYVRANGRIAIKIELEDRKPVCKDSSKLNS
QIGKELRAIVPLDCKRWSDVSKENYFILDLDEPVVQDYLDHEMSVLHRDFRCSLHKTYKQYDSPIGLIYVIDGKERTLSVFLKQLRLLFHSLIEVGLRHFYVISG
KSHKATGIG