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Lsi05G008340 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G008340
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:13594437..13611182
RNA-Seq ExpressionLsi05G008340
SyntenyLsi05G008340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN44082.1 hypothetical protein Csa_016717 [Cucumis sativus]9.4e-0647.83Show/hide
Query:  MDLTNMASDDEEDEDQSACSKNVKRKIADELDNVVKASVEREVMEKSPFSDPLHHNNRDPAPVTTPLPS
        MDLT  +SDDE +E+++        +I ++ DNV   S+ERE+ E SP+ DPLHHNN +    TTPLPS
Subjt:  MDLTNMASDDEEDEDQSACSKNVKRKIADELDNVVKASVEREVMEKSPFSDPLHHNNRDPAPVTTPLPS
TYK04585.1 hypothetical protein E5676_scaffold409G002220 [Cucumis melo var. makuwa]4.8e-1852.17Show/hide
Query:  DLDKQRTEPNKGKKLKRPRTAIPTFERRQSDRTLVKTSWRFAKSFSMDLTNMASDDEEDEDQSACSKNVKRKIADELDNVVKASVEREVMEKSPFSDPLH
        D DK+++    GKKLKRPR+   T ERR+SDRTLVKTSWRFAKSFSMDLT   SDDEE+E ++   +                  ERE+ E SP  D LH
Subjt:  DLDKQRTEPNKGKKLKRPRTAIPTFERRQSDRTLVKTSWRFAKSFSMDLTNMASDDEEDEDQSACSKNVKRKIADELDNVVKASVEREVMEKSPFSDPLH

Query:  HNNRDPAPVTTPLPS
        H+N D    TTPLPS
Subjt:  HNNRDPAPVTTPLPS
TrEMBL top hitse value%identityAlignment
A0A0A0K715 Uncharacterized protein4.5e-0647.83Show/hide
Query:  MDLTNMASDDEEDEDQSACSKNVKRKIADELDNVVKASVEREVMEKSPFSDPLHHNNRDPAPVTTPLPS
        MDLT  +SDDE +E+++        +I ++ DNV   S+ERE+ E SP+ DPLHHNN +    TTPLPS
Subjt:  MDLTNMASDDEEDEDQSACSKNVKRKIADELDNVVKASVEREVMEKSPFSDPLHHNNRDPAPVTTPLPS
A0A5D3BZI8 Uncharacterized protein2.3e-1852.17Show/hide
Query:  DLDKQRTEPNKGKKLKRPRTAIPTFERRQSDRTLVKTSWRFAKSFSMDLTNMASDDEEDEDQSACSKNVKRKIADELDNVVKASVEREVMEKSPFSDPLH
        D DK+++    GKKLKRPR+   T ERR+SDRTLVKTSWRFAKSFSMDLT   SDDEE+E ++   +                  ERE+ E SP  D LH
Subjt:  DLDKQRTEPNKGKKLKRPRTAIPTFERRQSDRTLVKTSWRFAKSFSMDLTNMASDDEEDEDQSACSKNVKRKIADELDNVVKASVEREVMEKSPFSDPLH

Query:  HNNRDPAPVTTPLPS
        H+N D    TTPLPS
Subjt:  HNNRDPAPVTTPLPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAGTTCTATTTGTGGGTCTAAAACTTGCTACATTTTCCATAATGAAGTCCAATATGCATGATTTGGATAAGCAAAGAACTGAACCAAACAAGGGTAAGAAGTT
AAAAAGACCGCGTACTGCAATACCGACATTTGAACGACGACAATCTGATCGCACCTTGGTGAAAACGTCTTGGAGATTTGCAAAGTCGTTTAGTATGGACTTAACCAATA
TGGCCAGTGACGACGAGGAGGATGAGGACCAATCTGCTTGTTCAAAGAATGTAAAAAGGAAGATAGCAGATGAATTAGATAATGTCGTGAAGGCTAGTGTAGAGAGAGAG
GTTATGGAAAAATCTCCTTTTTCTGACCCACTTCACCACAACAATAGGGATCCTGCACCTGTTACTACTCCACTTCCTTCACGTGTCGATGAAATTGAAAAAATCAGCGA
GCAAAATTCTCATAATACTACTGTTACAGTACCACCATCAACAAATGCTCCAACTCCAATCTTAAATTCCCCACCGGATCACGATTTAGGGTGTCTAAAACGGCAACATT
TGGTCTCATCTCTATTATCACGACTTTCTTCTTCATTCGACGATGTGTTGAAGGGATTGATGAATGTTATAAACCTTCACCAAAACACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAGTTCTATTTGTGGGTCTAAAACTTGCTACATTTTCCATAATGAAGTCCAATATGCATGATTTGGATAAGCAAAGAACTGAACCAAACAAGGGTAAGAAGTT
AAAAAGACCGCGTACTGCAATACCGACATTTGAACGACGACAATCTGATCGCACCTTGGTGAAAACGTCTTGGAGATTTGCAAAGTCGTTTAGTATGGACTTAACCAATA
TGGCCAGTGACGACGAGGAGGATGAGGACCAATCTGCTTGTTCAAAGAATGTAAAAAGGAAGATAGCAGATGAATTAGATAATGTCGTGAAGGCTAGTGTAGAGAGAGAG
GTTATGGAAAAATCTCCTTTTTCTGACCCACTTCACCACAACAATAGGGATCCTGCACCTGTTACTACTCCACTTCCTTCACGTGTCGATGAAATTGAAAAAATCAGCGA
GCAAAATTCTCATAATACTACTGTTACAGTACCACCATCAACAAATGCTCCAACTCCAATCTTAAATTCCCCACCGGATCACGATTTAGGGTGTCTAAAACGGCAACATT
TGGTCTCATCTCTATTATCACGACTTTCTTCTTCATTCGACGATGTGTTGAAGGGATTGATGAATGTTATAAACCTTCACCAAAACACTTGA
Protein sequenceShow/hide protein sequence
MAKVLFVGLKLATFSIMKSNMHDLDKQRTEPNKGKKLKRPRTAIPTFERRQSDRTLVKTSWRFAKSFSMDLTNMASDDEEDEDQSACSKNVKRKIADELDNVVKASVERE
VMEKSPFSDPLHHNNRDPAPVTTPLPSRVDEIEKISEQNSHNTTVTVPPSTNAPTPILNSPPDHDLGCLKRQHLVSSLLSRLSSSFDDVLKGLMNVINLHQNT