; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G008410 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G008410
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:13726638..13773365
RNA-Seq ExpressionLsi05G008410
SyntenyLsi05G008410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAS73235.1 Os01g0623750, partial [Oryza sativa Japonica Group]6.9e-0456.82Show/hide
Query:  LIPWPGPQATFSIHKFDVSGPIEMQSSPVPMMELRIVTAEDCAT
        L+PWPGPQ T S  + +V GP EMQSSPV M+   +VTA+D  T
Subjt:  LIPWPGPQATFSIHKFDVSGPIEMQSSPVPMMELRIVTAEDCAT
KAB8082535.1 hypothetical protein EE612_004442, partial [Oryza sativa]6.9e-0456.82Show/hide
Query:  LIPWPGPQATFSIHKFDVSGPIEMQSSPVPMMELRIVTAEDCAT
        L+PWPGPQ T S  + +V GP EMQSSPV M+   +VTA+D  T
Subjt:  LIPWPGPQATFSIHKFDVSGPIEMQSSPVPMMELRIVTAEDCAT
TrEMBL top hitse value%identityAlignment
A0A0P0V5F7 Os01g0623750 protein (Fragment)3.3e-0456.82Show/hide
Query:  LIPWPGPQATFSIHKFDVSGPIEMQSSPVPMMELRIVTAEDCAT
        L+PWPGPQ T S  + +V GP EMQSSPV M+   +VTA+D  T
Subjt:  LIPWPGPQATFSIHKFDVSGPIEMQSSPVPMMELRIVTAEDCAT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGATGTCGCTGCCTGAGAAGAAAAGAAAGAAAAAAAAATTAGAGAGAGTAGAGGAAGTGAGAAAGGGTGAGGGAGAAGATGAAGATTACCTAATTCCATGGCCAGG
TCCACAAGCAACATTCTCAATCCACAAGTTCGACGTGTCAGGACCTATTGAAATGCAGTCATCACCAGTGCCAATGATGGAGTTGAGGATAGTAACCGCTGAAGATTGTG
CTACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGATGTCGCTGCCTGAGAAGAAAAGAAAGAAAAAAAAATTAGAGAGAGTAGAGGAAGTGAGAAAGGGTGAGGGAGAAGATGAAGATTACCTAATTCCATGGCCAGG
TCCACAAGCAACATTCTCAATCCACAAGTTCGACGTGTCAGGACCTATTGAAATGCAGTCATCACCAGTGCCAATGATGGAGTTGAGGATAGTAACCGCTGAAGATTGTG
CTACGTGA
Protein sequenceShow/hide protein sequence
MRMSLPEKKRKKKKLERVEEVRKGEGEDEDYLIPWPGPQATFSIHKFDVSGPIEMQSSPVPMMELRIVTAEDCAT