; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G008420 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G008420
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionpolygalacturonase-like
Genome locationchr05:13781144..13782024
RNA-Seq ExpressionLsi05G008420
SyntenyLsi05G008420
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold
IPR024535 - Pectate lyase superfamily protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAC26510.1 polygalacturonase precursor [Cucumis melo]1.1e-6542.49Show/hide
Query:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH
        M+VV +I L LL   HAL  A GGLTFDIV+LGAKPDGKTDASHAL  AWA AC+S +A+TVYVPKG FYVQS NF GPCN N ITFLI+G  +ASS+F 
Subjt:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH

Query:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNSS--------------------------------------------------------------
        VLAKSR+WISF+ +N LSIYGG+LDGQGT LWACKNS                                                               
Subjt:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNSS--------------------------------------------------------------

Query:  -----------------------------SWV---------------LGKL-------------------------------------------------
                                      W+               LGK                                                  
Subjt:  -----------------------------SWV---------------LGKL-------------------------------------------------

Query:  ----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI
                        C  QASGVKISNV Y+DIHGTSA++VGI FECSPARPCN ++L+DV+LIFKDQIAQA CEYATGTTLGLVQPSNCL+
Subjt:  ----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI

KGN66851.2 hypothetical protein Csa_007016 [Cucumis sativus]7.3e-7853.87Show/hide
Query:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH
        M VV +I L LL  +HAL  A GGLTFDIV+LGAKPD KTDASHAL  AWA ACAS +A+TVYVPKG FYVQS NF GPCNNN ITFLIDG  +ASSDF 
Subjt:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH

Query:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNS---------------------------------------------------------------
        VLAKSR+WISF+++N LSIYGGVLDGQGT LWACKNS                                                               
Subjt:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNS---------------------------------------------------------------

Query:  ------SSW----------------VLGKL----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQI
               SW                VL  +                C  QASGVKISNVTYKDI GTSA++VGI FECSPARPCN ++LEDV+LIFKDQI
Subjt:  ------SSW----------------VLGKL----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQI

Query:  AQAWCEYATGTTLGLVQPSNCLI
        AQAWCEYATGTTLGLVQPSNCL+
Subjt:  AQAWCEYATGTTLGLVQPSNCLI

NP_001315381.1 polygalacturonase-like precursor [Cucumis melo]8.4e-6642.49Show/hide
Query:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH
        M+VV +I L LL   HAL  A GGLTFDIV+LGAKPDGKTDASHAL  AWA AC+S +A+TVYVPKG FYVQS NF GPCN N ITFLI+G  +ASS+F 
Subjt:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH

Query:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNSS--------------------------------------------------------------
        VLAKSR+WISF+ +N LSIYGG+LDGQGT LWACKNS                                                               
Subjt:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNSS--------------------------------------------------------------

Query:  -----------------------------SWV---------------LGKL-------------------------------------------------
                                      W+               LGK                                                  
Subjt:  -----------------------------SWV---------------LGKL-------------------------------------------------

Query:  ----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI
                        C  QASGVKISNV Y+DIHGTSA++VGI FECSPARPCN ++L+DV+LIFKDQIAQA CEYATGTTLGLVQPSNCL+
Subjt:  ----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI

XP_004139061.1 polygalacturonase [Cucumis sativus]9.6e-7044.27Show/hide
Query:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH
        M VV +I L LL  +HAL  A GGLTFDIV+LGAKPD KTDASHAL  AWA ACAS +A+TVYVPKG FYVQS NF GPCNNN ITFLIDG  +ASSDF 
Subjt:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH

Query:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNS---------------------------------------------------------------
        VLAKSR+WISF+++N LSIYGGVLDGQGT LWACKNS                                                               
Subjt:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNS---------------------------------------------------------------

Query:  ----------------------------------------------------------------------------SSW----------------VLGKL
                                                                                     SW                VL  +
Subjt:  ----------------------------------------------------------------------------SSW----------------VLGKL

Query:  ----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI
                        C  QASGVKISNVTYKDI GTSA++VGI FECSPARPCN ++LEDV+LIFKDQIAQAWCEYATGTTLGLVQPSNCL+
Subjt:  ----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI

XP_008450348.2 PREDICTED: polygalacturonase-like [Cucumis melo]6.4e-6642.49Show/hide
Query:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH
        M+VV +I L LL   HAL  A GGLTFDIV+LGAKPDGKTDASHAL  AWA AC+S +A+TVYVPKG FYVQS NF GPCN N ITFLI+G  +ASS+F 
Subjt:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH

Query:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNSS--------------------------------------------------------------
        VLAKSR+WISF+ +N LSIYGG+LDGQGT LWACKNS                                                               
Subjt:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNSS--------------------------------------------------------------

Query:  -----------------------------SWV---------------LGKL-------------------------------------------------
                                      W+               LGK                                                  
Subjt:  -----------------------------SWV---------------LGKL-------------------------------------------------

Query:  ----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI
                        C  QASGVKISNV Y+DIHGTSA++VGI FECSPARPCN ++L+DV+LIFKDQIAQA CEYATGTTLGLVQPSNCL+
Subjt:  ----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI

TrEMBL top hitse value%identityAlignment
A0A0A0LXR8 Uncharacterized protein4.6e-7044.27Show/hide
Query:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH
        M VV +I L LL  +HAL  A GGLTFDIV+LGAKPD KTDASHAL  AWA ACAS +A+TVYVPKG FYVQS NF GPCNNN ITFLIDG  +ASSDF 
Subjt:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH

Query:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNS---------------------------------------------------------------
        VLAKSR+WISF+++N LSIYGGVLDGQGT LWACKNS                                                               
Subjt:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNS---------------------------------------------------------------

Query:  ----------------------------------------------------------------------------SSW----------------VLGKL
                                                                                     SW                VL  +
Subjt:  ----------------------------------------------------------------------------SSW----------------VLGKL

Query:  ----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI
                        C  QASGVKISNVTYKDI GTSA++VGI FECSPARPCN ++LEDV+LIFKDQIAQAWCEYATGTTLGLVQPSNCL+
Subjt:  ----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI

A0A1S3BPQ0 polygalacturonase-like3.1e-6642.49Show/hide
Query:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH
        M+VV +I L LL   HAL  A GGLTFDIV+LGAKPDGKTDASHAL  AWA AC+S +A+TVYVPKG FYVQS NF GPCN N ITFLI+G  +ASS+F 
Subjt:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH

Query:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNSS--------------------------------------------------------------
        VLAKSR+WISF+ +N LSIYGG+LDGQGT LWACKNS                                                               
Subjt:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNSS--------------------------------------------------------------

Query:  -----------------------------SWV---------------LGKL-------------------------------------------------
                                      W+               LGK                                                  
Subjt:  -----------------------------SWV---------------LGKL-------------------------------------------------

Query:  ----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI
                        C  QASGVKISNV Y+DIHGTSA++VGI FECSPARPCN ++L+DV+LIFKDQIAQA CEYATGTTLGLVQPSNCL+
Subjt:  ----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI

A0A5A7UR99 Polygalacturonase-like3.2e-6341.49Show/hide
Query:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH
        M+VV +I L LL   HAL  A GGLTFDIV+LGAKPDGKTDASHAL  AWA AC+S +A+TVYVPKG FYVQS NF GPCN N ITFLI+G  +ASS+F 
Subjt:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH

Query:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNSS--------------------------------------------------------------
        VLAKSR+WISF+ +N LSIYGG+LDGQGT LWACKNS                                                               
Subjt:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNSS--------------------------------------------------------------

Query:  -----------------------------SWVLGKLC------------------------------NLQASGVK-------------------------
                                      W+    C                              N   +GV+                         
Subjt:  -----------------------------SWVLGKLC------------------------------NLQASGVK-------------------------

Query:  --------------------ISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI
                            ISNV Y+DIHGTSA++VGI FECSPARPCN ++L+DV+LIFKDQIAQA CEYATGTTLGLVQPSNCL+
Subjt:  --------------------ISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI

A4UQV4 Polygalacturonase4.1e-6642.49Show/hide
Query:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH
        M+VV +I L LL   HAL  A GGLTFDIV+LGAKPDGKTDASHAL  AWA AC+S +A+TVYVPKG FYVQS NF GPCN N ITFLI+G  +ASS+F 
Subjt:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH

Query:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNSS--------------------------------------------------------------
        VLAKSR+WISF+ +N LSIYGG+LDGQGT LWACKNS                                                               
Subjt:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNSS--------------------------------------------------------------

Query:  -----------------------------SWV---------------LGKL-------------------------------------------------
                                      W+               LGK                                                  
Subjt:  -----------------------------SWV---------------LGKL-------------------------------------------------

Query:  ----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI
                        C  QASGVKISNV Y+DIHGTSA++VGI FECSPARPCN ++L+DV+LIFKDQIAQA CEYATGTTLGLVQPSNCL+
Subjt:  ----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI

O81244 Polygalacturonase5.3e-6642.49Show/hide
Query:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH
        M+VV +I L LL   HAL  A GGLTFDIV+LGAKPDGKTDASHAL  AWA AC+S +A+TVYVPKG FYVQS NF GPCN N ITFLI+G  +ASS+F 
Subjt:  MVVVFVISLGLLFMNHAL--AVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFH

Query:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNSS--------------------------------------------------------------
        VLAKSR+WISF+ +N LSIYGG+LDGQGT LWACKNS                                                               
Subjt:  VLAKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNSS--------------------------------------------------------------

Query:  -----------------------------SWV---------------LGKL-------------------------------------------------
                                      W+               LGK                                                  
Subjt:  -----------------------------SWV---------------LGKL-------------------------------------------------

Query:  ----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI
                        C  QASGVKISNV Y+DIHGTSA++VGI FECSPARPCN ++L+DV+LIFKDQIAQA CEYATGTTLGLVQPSNCL+
Subjt:  ----------------CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI

SwissProt top hitse value%identityAlignment
O22818 Probable polygalacturonase At2g438607.0e-2337.72Show/hide
Query:  TFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNG-PCNNNDITFLIDGMFMASSDFHVLAKSRSWISFTYLNRLSIYGGVL
        T +++S GAKPDG  D++ A   AW  ACASA   T+ VPKG F V +  F+G  C    I+  I G  +A  DF ++A S+ WI F  +  +SIYGG+L
Subjt:  TFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNG-PCNNNDITFLIDGMFMASSDFHVLAKSRSWISFTYLNRLSIYGGVL

Query:  DGQGTALWACKNSSSWVLGKLCNLQASGVKIS---NVTYKDIHGTSASKVGIKFECSPARPCNGLKL
        D QGT+LW CKN+     G  C   A  +  S   N+    +   ++ K  I  + S     +G+K+
Subjt:  DGQGTALWACKNSSSWVLGKLCNLQASGVKIS---NVTYKDIHGTSASKVGIKFECSPARPCNGLKL

P26216 Exopolygalacturonase1.8e-1839.04Show/hide
Query:  GLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFHVLAKSRSWISFTYLNRLSIYG-G
        G +FDI  LGA  +GKTD++ A+  AWA AC      T+ +PKG F V   NF GPC   D+T  +DG  +A++D        +WI    ++ L I G G
Subjt:  GLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFHVLAKSRSWISFTYLNRLSIYG-G

Query:  VLDGQGTALWACKNS-----------SSWVLGKLCNLQASGVKISN
         LDGQG A+W+ KNS           +S V+  + N + SGV + N
Subjt:  VLDGQGTALWACKNS-----------SSWVLGKLCNLQASGVKISN

P35338 Exopolygalacturonase1.0e-1839.04Show/hide
Query:  GLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFHVLAKSRSWISFTYLNRLSIYG-G
        G +FDI  LGA  +GKTD++ A+  AWA AC      T+ +PKG F V   NF GPC   D+T  +DG  +A++D     +  +WI    ++ L I G G
Subjt:  GLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFHVLAKSRSWISFTYLNRLSIYG-G

Query:  VLDGQGTALWACKNS-----------SSWVLGKLCNLQASGVKISN
         LDGQG A+W+ KNS           +S V+  + N + SGV + N
Subjt:  VLDGQGTALWACKNS-----------SSWVLGKLCNLQASGVKISN

P35339 Exopolygalacturonase4.0e-1838.31Show/hide
Query:  NHALAVG-GLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFHVLAKSRSWISFTYLN
        N A A G G +FDI  LGA  +GKTD++ A+  AWA AC      T+ +PKG F V   NF GPC   D+T  ++G  +A++D        +WI    ++
Subjt:  NHALAVG-GLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFHVLAKSRSWISFTYLN

Query:  RLSIYG-GVLDGQGTALWACKNS-----------SSWVLGKLCNLQASGVKISN
         L I G G LDGQG A+W+ KNS           +S V+  + N + SG+ + N
Subjt:  RLSIYG-GVLDGQGTALWACKNS-----------SSWVLGKLCNLQASGVKISN

P48979 Polygalacturonase8.8e-4229.46Show/hide
Query:  VFVISLGLLFMNHALAVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFHVLAKS
        +F +SL  +FM ++     LT+++ SLGAK DGKTD++ A   AWA ACAS     +YVP GTF+++   F+GPC NN ITF I G  +A SD+ V+  +
Subjt:  VFVISLGLLFMNHALAVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFHVLAKS

Query:  RSWISFTYLNRLSIYGGVLDGQGTALWACK----------------------------------------------------------------------
         +WI F ++N ++I GG+LDGQGTALWACK                                                                      
Subjt:  RSWISFTYLNRLSIYGGVLDGQGTALWACK----------------------------------------------------------------------

Query:  ---------------------NSSSWVLG-----------------------------------------------------------------------
                              S+ W+ G                                                                       
Subjt:  ---------------------NSSSWVLG-----------------------------------------------------------------------

Query:  ---------KLCNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCL
                 K C  Q SGV+IS+VTY+DIHGTSA++V +KF+CSP  PC  +KLEDV+L +K+Q A++ C +A GTT G+VQP++CL
Subjt:  ---------KLCNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCL

Arabidopsis top hitse value%identityAlignment
AT1G05650.1 Pectin lyase-like superfamily protein2.6e-2532.55Show/hide
Query:  VVFVISLGLLFMNHALAVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFHVLAK
        + F +   LL      +   + F++VS GAKPDG TD++ A   AW  AC SA +ATV VP GTF ++   F GPC +  ITF + G  +A  D+     
Subjt:  VVFVISLGLLFMNHALAVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFHVLAK

Query:  SRSWISFTYLNRLSIYGGVLDGQGTALWACKNSSSWVLGKLCNLQASGVK-ISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQA-
        S SWI F  +NR S+ GG  D +G+  W+C+ S     G+ C     GV+ IS  + KD+  +    +  +        C  + + ++RL+         
Subjt:  SRSWISFTYLNRLSIYGGVLDGQGTALWACKNSSSWVLGKLCNLQASGVK-ISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQA-

Query:  --WCEYATGTTL
            +++TG TL
Subjt:  --WCEYATGTTL

AT1G05650.1 Pectin lyase-like superfamily protein1.6e-1445.45Show/hide
Query:  CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIF-KDQIAQAWCEYATGTTLGLVQPSNCL
        C  + SGVKI+ VTYK+I GTSA++  +K  CS + PC G+ L+D++L + K   A + C  A G  LG++QP++CL
Subjt:  CNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIF-KDQIAQAWCEYATGTTLGLVQPSNCL

AT2G43860.1 Pectin lyase-like superfamily protein5.0e-2437.72Show/hide
Query:  TFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNG-PCNNNDITFLIDGMFMASSDFHVLAKSRSWISFTYLNRLSIYGGVL
        T +++S GAKPDG  D++ A   AW  ACASA   T+ VPKG F V +  F+G  C    I+  I G  +A  DF ++A S+ WI F  +  +SIYGG+L
Subjt:  TFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNG-PCNNNDITFLIDGMFMASSDFHVLAKSRSWISFTYLNRLSIYGGVL

Query:  DGQGTALWACKNSSSWVLGKLCNLQASGVKIS---NVTYKDIHGTSASKVGIKFECSPARPCNGLKL
        D QGT+LW CKN+     G  C   A  +  S   N+    +   ++ K  I  + S     +G+K+
Subjt:  DGQGTALWACKNSSSWVLGKLCNLQASGVKIS---NVTYKDIHGTSASKVGIKFECSPARPCNGLKL

AT2G43870.1 Pectin lyase-like superfamily protein7.9e-3025.14Show/hide
Query:  TFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNG-PCNNNDITFLIDGMFMASSDFHVLAKSRSWISFTYLNRLSIYGGVL
        +++++S GAKPDGKTDA+ A    W  ACAS+   T+ VPKG F ++S  F+G  C    +TF IDG  +A +D+ V+     WI F +L+ +++YGGVL
Subjt:  TFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNG-PCNNNDITFLIDGMFMASSDFHVLAKSRSWISFTYLNRLSIYGGVL

Query:  DGQGTALWACKNSSS-------------------------------------------------------------------------------------
        D +G +LW CK S                                                                                       
Subjt:  DGQGTALWACKNSSS-------------------------------------------------------------------------------------

Query:  -----WV------------LGKL-------------------------------------------------------------------CNLQASGVKI
             W+            +G L                                                                   C  Q SG+KI
Subjt:  -----WV------------LGKL-------------------------------------------------------------------CNLQASGVKI

Query:  SNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCL
        S+V + DIHGTSA++VG+K +CS  +PC G++LEDV+L ++++ A + C +A G   G  QP NCL
Subjt:  SNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCL

AT2G43890.1 Pectin lyase-like superfamily protein4.1e-2635.2Show/hide
Query:  MVVVFVISLGLLFMNHALAVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFHVL
        + V+ +     L M  + A     +++VS GAKPDG+TD++ A   AW  AC SA A TV VP+G+F ++   F GPC +  ITF I G  +A SD+  L
Subjt:  MVVVFVISLGLLFMNHALAVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFHVL

Query:  AKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNSSSWVLGKLCNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQ
          S  WI F  +NR+SI GG LD +G + WAC+ S     GK C + A  +  +     D+  +  + +  +        CN + +  V+L+  DQ
Subjt:  AKSRSWISFTYLNRLSIYGGVLDGQGTALWACKNSSSWVLGKLCNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQ

AT3G59850.1 Pectin lyase-like superfamily protein2.2e-3225.53Show/hide
Query:  LLFMNHALAVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNG-PCNNNDITFLIDGMFMASSDFHVLAKSRSWISF
        LLF+    +    T++I+S GAKPDGKTD++ A  + WA ACAS    T+ VPKG F ++S  F+G  C    +TF I G  +A SD+ V+ K   WI F
Subjt:  LLFMNHALAVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNG-PCNNNDITFLIDGMFMASSDFHVLAKSRSWISF

Query:  TYLNRLSIYGGVLDGQGTALWACKNSSS------------------------------------------------------------------------
         +L+ +S+YGGVLD QG +LW+CK S                                                                          
Subjt:  TYLNRLSIYGGVLDGQGTALWACKNSSS------------------------------------------------------------------------

Query:  ------------------WV---------------LGK--------------------------------------------------------------
                          W+               LGK                                                              
Subjt:  ------------------WV---------------LGK--------------------------------------------------------------

Query:  ---LCNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCL
            C  Q SG+KIS+V + DIHGTSA++VG+K +CS  +PC G++++DV+L ++++ A   C +A G+  G  +P++CL
Subjt:  ---LCNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTTGTTTTTGTAATTTCCCTTGGGCTTTTGTTTATGAACCACGCCTTGGCTGTTGGTGGATTGACGTTTGATATCGTCAGTCTTGGAGCCAAGCCGGATGGCAA
GACCGATGCCTCACATGCCTTGCATATTGCATGGGCTCATGCATGTGCCTCGGCTATGGCGGCCACCGTTTACGTGCCTAAGGGAACATTCTACGTTCAAAGTGCCAACT
TTAATGGACCTTGTAACAACAATGATATCACTTTTCTCATCGATGGCATGTTCATGGCTTCCTCAGACTTTCATGTTTTGGCCAAATCAAGATCATGGATTTCTTTCACA
TATCTAAATAGGCTTTCCATTTATGGTGGTGTTCTTGATGGCCAAGGAACTGCCTTGTGGGCTTGCAAAAACTCAAGTAGTTGGGTTTTAGGGAAGTTATGTAATCTTCA
AGCTTCTGGAGTAAAAATTAGTAACGTTACGTACAAAGACATTCATGGAACATCAGCTAGTAAAGTAGGTATAAAGTTTGAGTGTAGCCCTGCAAGGCCATGCAATGGAT
TAAAGTTGGAAGATGTAAGGCTGATATTCAAGGATCAAATTGCCCAAGCTTGGTGTGAATATGCAACAGGAACTACCTTGGGTCTAGTTCAACCTTCTAATTGCTTAATA
TATAAT
mRNA sequenceShow/hide mRNA sequence
GTTTGAAATGGTGGTTGTTTTTGTAATTTCCCTTGGGCTTTTGTTTATGAACCACGCCTTGGCTGTTGGTGGATTGACGTTTGATATCGTCAGTCTTGGAGCCAAGCCGG
ATGGCAAGACCGATGCCTCACATGCCTTGCATATTGCATGGGCTCATGCATGTGCCTCGGCTATGGCGGCCACCGTTTACGTGCCTAAGGGAACATTCTACGTTCAAAGT
GCCAACTTTAATGGACCTTGTAACAACAATGATATCACTTTTCTCATCGATGGCATGTTCATGGCTTCCTCAGACTTTCATGTTTTGGCCAAATCAAGATCATGGATTTC
TTTCACATATCTAAATAGGCTTTCCATTTATGGTGGTGTTCTTGATGGCCAAGGAACTGCCTTGTGGGCTTGCAAAAACTCAAGTAGTTGGGTTTTAGGGAAGTTATGTA
ATCTTCAAGCTTCTGGAGTAAAAATTAGTAACGTTACGTACAAAGACATTCATGGAACATCAGCTAGTAAAGTAGGTATAAAGTTTGAGTGTAGCCCTGCAAGGCCATGC
AATGGATTAAAGTTGGAAGATGTAAGGCTGATATTCAAGGATCAAATTGCCCAAGCTTGGTGTGAATATGCAACAGGAACTACCTTGGGTCTAGTTCAACCTTCTAATTG
CTTAATATATAAT
Protein sequenceShow/hide protein sequence
MVVVFVISLGLLFMNHALAVGGLTFDIVSLGAKPDGKTDASHALHIAWAHACASAMAATVYVPKGTFYVQSANFNGPCNNNDITFLIDGMFMASSDFHVLAKSRSWISFT
YLNRLSIYGGVLDGQGTALWACKNSSSWVLGKLCNLQASGVKISNVTYKDIHGTSASKVGIKFECSPARPCNGLKLEDVRLIFKDQIAQAWCEYATGTTLGLVQPSNCLI
YN