; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G008660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G008660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionABC transporter C family member 2-like
Genome locationchr05:14575357..14577517
RNA-Seq ExpressionLsi05G008660
SyntenyLsi05G008660
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0000166 - nucleotide binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK01412.1 ABC transporter C family member 2-like isoform X2 [Cucumis melo var. makuwa]1.5e-2766.1Show/hide
Query:  ISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLPI
        +  IN+F V+ IP LVV TSFGLFTVFEGDLTPS+AYTS SLLSVLMFSLC     IPQ                VVNAVVSLKR+EEL+ A+ERI+LP 
Subjt:  ISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLPI

Query:  PPLNLDLPAISIKNGNFA
        PPLN DLP+ISIKNGNFA
Subjt:  PPLNLDLPAISIKNGNFA

XP_008460280.1 PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 2-like, partial [Cucumis melo]3.6e-2664.41Show/hide
Query:  ISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLPI
        +  IN+FIV+ IP LVV TSFGLFTVFEG+LTPS+AYTS SLLSVL+FSLC     IPQ                VVNAVVSLKR+EEL++A+ERI+LP 
Subjt:  ISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLPI

Query:  PPLNLDLPAISIKNGNFA
        PPLN DLP+I IKNGNFA
Subjt:  PPLNLDLPAISIKNGNFA

XP_022932938.1 ABC transporter C family member 2-like isoform X1 [Cucurbita moschata]1.1e-1953.78Show/hide
Query:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP
        ++  +N+FI+N+IP LV  T+FGLFT F GDLTPS+A+TS SL +VL F     L ++P ++             +VVNA VSLKRLEELL+A E++LLP
Subjt:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP

Query:  IPPLNLDLPAISIKNGNFA
         PPLN  LPAISIKNG F+
Subjt:  IPPLNLDLPAISIKNGNFA

XP_022973221.1 ABC transporter C family member 2-like isoform X2 [Cucurbita maxima]1.1e-1953.78Show/hide
Query:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP
        ++  +N+FI+N+IP LV  T+FGLFT F GDLTPS+A+TS SL +VL F     L ++P ++             +VVNA VSLKRLEELL+A E++LLP
Subjt:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP

Query:  IPPLNLDLPAISIKNGNFA
         PPLN  LPAISIKNG F+
Subjt:  IPPLNLDLPAISIKNGNFA

XP_022973223.1 ABC transporter C family member 2-like isoform X4 [Cucurbita maxima]1.1e-1953.78Show/hide
Query:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP
        ++  +N+FI+N+IP LV  T+FGLFT F GDLTPS+A+TS SL +VL F     L ++P ++             +VVNA VSLKRLEELL+A E++LLP
Subjt:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP

Query:  IPPLNLDLPAISIKNGNFA
         PPLN  LPAISIKNG F+
Subjt:  IPPLNLDLPAISIKNGNFA

TrEMBL top hitse value%identityAlignment
A0A1S3CC86 LOW QUALITY PROTEIN: ABC transporter C family member 2-like1.8e-2664.41Show/hide
Query:  ISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLPI
        +  IN+FIV+ IP LVV TSFGLFTVFEG+LTPS+AYTS SLLSVL+FSLC     IPQ                VVNAVVSLKR+EEL++A+ERI+LP 
Subjt:  ISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLPI

Query:  PPLNLDLPAISIKNGNFA
        PPLN DLP+I IKNGNFA
Subjt:  PPLNLDLPAISIKNGNFA

A0A5D3BRL7 ABC transporter C family member 2-like isoform X27.1e-2866.1Show/hide
Query:  ISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLPI
        +  IN+F V+ IP LVV TSFGLFTVFEGDLTPS+AYTS SLLSVLMFSLC     IPQ                VVNAVVSLKR+EEL+ A+ERI+LP 
Subjt:  ISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLPI

Query:  PPLNLDLPAISIKNGNFA
        PPLN DLP+ISIKNGNFA
Subjt:  PPLNLDLPAISIKNGNFA

A0A6J1I6Y7 ABC transporter C family member 2-like isoform X35.5e-2053.78Show/hide
Query:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP
        ++  +N+FI+N+IP LV  T+FGLFT F GDLTPS+A+TS SL +VL F     L ++P ++             +VVNA VSLKRLEELL+A E++LLP
Subjt:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP

Query:  IPPLNLDLPAISIKNGNFA
         PPLN  LPAISIKNG F+
Subjt:  IPPLNLDLPAISIKNGNFA

A0A6J1IAT6 ABC transporter C family member 2-like isoform X15.5e-2053.78Show/hide
Query:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP
        ++  +N+FI+N+IP LV  T+FGLFT F GDLTPS+A+TS SL +VL F     L ++P ++             +VVNA VSLKRLEELL+A E++LLP
Subjt:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP

Query:  IPPLNLDLPAISIKNGNFA
         PPLN  LPAISIKNG F+
Subjt:  IPPLNLDLPAISIKNGNFA

A0A6J1ICF0 ABC transporter C family member 2-like isoform X45.5e-2053.78Show/hide
Query:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP
        ++  +N+FI+N+IP LV  T+FGLFT F GDLTPS+A+TS SL +VL F     L ++P ++             +VVNA VSLKRLEELL+A E++LLP
Subjt:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP

Query:  IPPLNLDLPAISIKNGNFA
         PPLN  LPAISIKNG F+
Subjt:  IPPLNLDLPAISIKNGNFA

SwissProt top hitse value%identityAlignment
Q42093 ABC transporter C family member 22.2e-1848.74Show/hide
Query:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP
        ++  +N FI+N+IP LV   SFG+FT+  GDLTP++A+TS SL +VL F     LF++P ++             +VVNA VSLKRLEE+L   ERILLP
Subjt:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP

Query:  IPPLNLDLPAISIKNGNFA
         PP+    PAISI+NG F+
Subjt:  IPPLNLDLPAISIKNGNFA

Q9C8G9 ABC transporter C family member 11.4e-1747.06Show/hide
Query:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP
        ++S  N FI+N+IP LV   SFG+F++  GDLTP++A+TS SL SVL F     LF++P ++             ++VNA VSL RLEE+L   ER+LLP
Subjt:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP

Query:  IPPLNLDLPAISIKNGNFA
         PP+    PAISI+NG F+
Subjt:  IPPLNLDLPAISIKNGNFA

Q9C8H0 ABC transporter C family member 122.1e-1647.06Show/hide
Query:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP
        ++S  N+FI+N+IP +V   SFG+F +  GDLTP++A+TS SL +VL F     L ++P +L             +VVNA VSL+R+EELL++ ERIL  
Subjt:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP

Query:  IPPLNLDLPAISIKNGNFA
         PPL    PAISIKNG F+
Subjt:  IPPLNLDLPAISIKNGNFA

Q9C8H1 ABC transporter C family member 112.5e-1443.7Show/hide
Query:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP
        ++S  N+FI+N+ P +V   SFG++ +  GDLTP++A+TS SL +VL   L     +I Q                 VNA VSL+R+EELL++ ERIL  
Subjt:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP

Query:  IPPLNLDLPAISIKNGNFA
         PPL    PAISIKNG F+
Subjt:  IPPLNLDLPAISIKNGNFA

Arabidopsis top hitse value%identityAlignment
AT1G30400.1 multidrug resistance-associated protein 11.0e-1847.06Show/hide
Query:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP
        ++S  N FI+N+IP LV   SFG+F++  GDLTP++A+TS SL SVL F     LF++P ++             ++VNA VSL RLEE+L   ER+LLP
Subjt:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP

Query:  IPPLNLDLPAISIKNGNFA
         PP+    PAISI+NG F+
Subjt:  IPPLNLDLPAISIKNGNFA

AT1G30400.2 multidrug resistance-associated protein 11.0e-1847.06Show/hide
Query:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP
        ++S  N FI+N+IP LV   SFG+F++  GDLTP++A+TS SL SVL F     LF++P ++             ++VNA VSL RLEE+L   ER+LLP
Subjt:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP

Query:  IPPLNLDLPAISIKNGNFA
         PP+    PAISI+NG F+
Subjt:  IPPLNLDLPAISIKNGNFA

AT1G30410.1 multidrug resistance-associated protein 131.5e-1747.06Show/hide
Query:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP
        ++S  N+FI+N+IP +V   SFG+F +  GDLTP++A+TS SL +VL F     L ++P +L             +VVNA VSL+R+EELL++ ERIL  
Subjt:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP

Query:  IPPLNLDLPAISIKNGNFA
         PPL    PAISIKNG F+
Subjt:  IPPLNLDLPAISIKNGNFA

AT2G34660.1 multidrug resistance-associated protein 21.6e-1948.74Show/hide
Query:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP
        ++  +N FI+N+IP LV   SFG+FT+  GDLTP++A+TS SL +VL F     LF++P ++             +VVNA VSLKRLEE+L   ERILLP
Subjt:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP

Query:  IPPLNLDLPAISIKNGNFA
         PP+    PAISI+NG F+
Subjt:  IPPLNLDLPAISIKNGNFA

AT2G34660.2 multidrug resistance-associated protein 21.6e-1948.74Show/hide
Query:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP
        ++  +N FI+N+IP LV   SFG+FT+  GDLTP++A+TS SL +VL F     LF++P ++             +VVNA VSLKRLEE+L   ERILLP
Subjt:  IISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLP

Query:  IPPLNLDLPAISIKNGNFA
         PP+    PAISI+NG F+
Subjt:  IPPLNLDLPAISIKNGNFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCCGAAAGGCATCATTTCTCGAATTAACAATTTCATAGTAAATGCTATTCCTAATTTGGTGGTTGGGACTTCTTTTGGATTATTCACAGTTTTTGAAGGAGACTT
GACTCCATCTAAGGCATATACATCACATTCACTACTTTCAGTGCTGATGTTTTCTTTATGCCCAACCCTCTTTATAATACCTCAGGTTTTGTTATCTGTTCCTTCAAGCT
TTATTTTTATAATGACACTTAGAGTGGTAAATGCCGTTGTATCGTTAAAGCGTCTAGAGGAGTTACTTATAGCTAGAGAAAGAATTCTACTTCCAATTCCTCCATTAAAT
CTAGACCTTCCAGCCATCTCAATCAAGAATGGAAACTTTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCCGAAAGGCATCATTTCTCGAATTAACAATTTCATAGTAAATGCTATTCCTAATTTGGTGGTTGGGACTTCTTTTGGATTATTCACAGTTTTTGAAGGAGACTT
GACTCCATCTAAGGCATATACATCACATTCACTACTTTCAGTGCTGATGTTTTCTTTATGCCCAACCCTCTTTATAATACCTCAGGTTTTGTTATCTGTTCCTTCAAGCT
TTATTTTTATAATGACACTTAGAGTGGTAAATGCCGTTGTATCGTTAAAGCGTCTAGAGGAGTTACTTATAGCTAGAGAAAGAATTCTACTTCCAATTCCTCCATTAAAT
CTAGACCTTCCAGCCATCTCAATCAAGAATGGAAACTTTGCTTGA
Protein sequenceShow/hide protein sequence
MVPKGIISRINNFIVNAIPNLVVGTSFGLFTVFEGDLTPSKAYTSHSLLSVLMFSLCPTLFIIPQVLLSVPSSFIFIMTLRVVNAVVSLKRLEELLIARERILLPIPPLN
LDLPAISIKNGNFA