; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G008890 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G008890
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionL10-interacting MYB domain-containing protein-like
Genome locationchr05:15475800..15477162
RNA-Seq ExpressionLsi05G008890
SyntenyLsi05G008890
Gene Ontology termsNA
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037002.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]2.5e-2843.41Show/hide
Query:  NGWDPLLGTITLEEEQWNDLFKMCML--------------------------------------------------------------------RTQREK
        NGWDPLL TI LEEEQWN+LFK+  +                                                                       + K
Subjt:  NGWDPLLGTITLEEEQWNDLFKMCML--------------------------------------------------------------------RTQREK

Query:  MTSLRKKSFSSTASQVDEGQSSRKKDEVDEELMECFKILNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINRI
           L K+SF  T+SQVDE Q+S KKD++ EELMEC  ILNTMED+DGEAY+K+LKLLHGDLAWRKLFL MPDSRK+DFIN +
Subjt:  MTSLRKKSFSSTASQVDEGQSSRKKDEVDEELMECFKILNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINRI

KAA0061221.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]4.1e-2641Show/hide
Query:  NGWDPLLGTITLEEEQWNDLFKM--------------------------------C-----------------------------------MLRTQREKM
        N WDPLLGTI LEEEQWN+LFK+                                C                                     R +++K 
Subjt:  NGWDPLLGTITLEEEQWNDLFKM--------------------------------C-----------------------------------MLRTQREKM

Query:  TS-------------------LRKKSFSSTASQVDEGQSSRKKDEVDEELMECFKILNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINRI
         S                   L K+SF  T+SQVDE Q+S KKD++ EELMEC  ILNTMED+DGEAY+K+LKLLHGDLAWRKLFL MPDSRK+DFIN +
Subjt:  TS-------------------LRKKSFSSTASQVDEGQSSRKKDEVDEELMECFKILNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINRI

TYJ96795.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]1.1e-2640Show/hide
Query:  NGWDPLLGTITLEEEQWNDLFKM-----------------------------------------------------------------------------
        NGWDPLLGTI LEEEQWN+LFK+                                                                             
Subjt:  NGWDPLLGTITLEEEQWNDLFKM-----------------------------------------------------------------------------

Query:  ---------CMLRTQREKMTSLRKKSFSSTASQVDEGQSSRKKDEVDEELMECFKILNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINRI
                       + K   L K+SF  T+SQVDE Q+S KKD++ EELMEC  ILNTMED+DGEAY+K+LKLLHGDLAWRKLFL MPDSRK+DFIN +
Subjt:  ---------CMLRTQREKMTSLRKKSFSSTASQVDEGQSSRKKDEVDEELMECFKILNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINRI

TYK21097.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]8.2e-2740.65Show/hide
Query:  LSQKSSEKHCVDEVVEIDGLK-----NEGSWPD-----KNEARF-----------VDLMDEEVAN--DNRPTTTFTRTSWNYMKNQLNA-------KNGW
        +SQKS+E+ CVD+VVEID LK      E  W +     K   +F           V +  +  A   +  P+T     S +  +N + +       +N  
Subjt:  LSQKSSEKHCVDEVVEIDGLK-----NEGSWPD-----KNEARF-----------VDLMDEEVAN--DNRPTTTFTRTSWNYMKNQLNA-------KNGW

Query:  DPLLGTITLEEEQWNDLFKMCM---LRTQREKMTSLRKKSFSSTASQVDEGQSSRKKDEVDEELMECFKILNTMEDIDGEAYTKVLKLLHGDLAWRKLFL
                 +++++   F   +       + K   L K+SF  T+SQVDE Q+S KKD++ EELMEC  ILNTMED+DGEAY+K+LKLLHGDLAWRKLFL
Subjt:  DPLLGTITLEEEQWNDLFKMCM---LRTQREKMTSLRKKSFSSTASQVDEGQSSRKKDEVDEELMECFKILNTMEDIDGEAYTKVLKLLHGDLAWRKLFL

Query:  LMPDSRKKDFINRI
         MPDSRK+DFIN +
Subjt:  LMPDSRKKDFINRI

XP_008461742.1 PREDICTED: L10-interacting MYB domain-containing protein-like [Cucumis melo]2.4e-3943.62Show/hide
Query:  VEIDGLKNEGSWPDKNEARFVDLMDEEVANDNRPTTTFTRTSWNYMKNQLNAK---------------------------------NGWDPLLGTIT---
        V+IDGLK E  W +K+EA FVDLMDEEVA  NRPTTTFT+TSWNYM+++LNA                                  NGWDPL G I    
Subjt:  VEIDGLKNEGSWPDKNEARFVDLMDEEVANDNRPTTTFTRTSWNYMKNQLNAK---------------------------------NGWDPLLGTIT---

Query:  ------LEEEQWNDLFKMCML--------------RTQREKMTS-------------------LRKKSFSSTASQVDEGQ-SSRKKDEVDEELMECFKIL
               E+E  ND+ +   +              R  R++  S                   L K+SF  T+S+VDE Q SS+K D++ EELMEC  IL
Subjt:  ------LEEEQWNDLFKMCML--------------RTQREKMTS-------------------LRKKSFSSTASQVDEGQ-SSRKKDEVDEELMECFKIL

Query:  NTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINRI
        +TMED+DG+ Y+K+LKLLH DL WRKLFL MPDSRK+DFIN +
Subjt:  NTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINRI

TrEMBL top hitse value%identityAlignment
A0A1S3CFA7 L10-interacting MYB domain-containing protein-like1.2e-3943.62Show/hide
Query:  VEIDGLKNEGSWPDKNEARFVDLMDEEVANDNRPTTTFTRTSWNYMKNQLNAK---------------------------------NGWDPLLGTIT---
        V+IDGLK E  W +K+EA FVDLMDEEVA  NRPTTTFT+TSWNYM+++LNA                                  NGWDPL G I    
Subjt:  VEIDGLKNEGSWPDKNEARFVDLMDEEVANDNRPTTTFTRTSWNYMKNQLNAK---------------------------------NGWDPLLGTIT---

Query:  ------LEEEQWNDLFKMCML--------------RTQREKMTS-------------------LRKKSFSSTASQVDEGQ-SSRKKDEVDEELMECFKIL
               E+E  ND+ +   +              R  R++  S                   L K+SF  T+S+VDE Q SS+K D++ EELMEC  IL
Subjt:  ------LEEEQWNDLFKMCML--------------RTQREKMTS-------------------LRKKSFSSTASQVDEGQ-SSRKKDEVDEELMECFKIL

Query:  NTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINRI
        +TMED+DG+ Y+K+LKLLH DL WRKLFL MPDSRK+DFIN +
Subjt:  NTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINRI

A0A5A7V5Z1 L10-interacting MYB domain-containing protein-like2.0e-2641Show/hide
Query:  NGWDPLLGTITLEEEQWNDLFKM--------------------------------C-----------------------------------MLRTQREKM
        N WDPLLGTI LEEEQWN+LFK+                                C                                     R +++K 
Subjt:  NGWDPLLGTITLEEEQWNDLFKM--------------------------------C-----------------------------------MLRTQREKM

Query:  TS-------------------LRKKSFSSTASQVDEGQSSRKKDEVDEELMECFKILNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINRI
         S                   L K+SF  T+SQVDE Q+S KKD++ EELMEC  ILNTMED+DGEAY+K+LKLLHGDLAWRKLFL MPDSRK+DFIN +
Subjt:  TS-------------------LRKKSFSSTASQVDEGQSSRKKDEVDEELMECFKILNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINRI

A0A5D3BNQ5 L10-interacting MYB domain-containing protein-like5.2e-2740Show/hide
Query:  NGWDPLLGTITLEEEQWNDLFKM-----------------------------------------------------------------------------
        NGWDPLLGTI LEEEQWN+LFK+                                                                             
Subjt:  NGWDPLLGTITLEEEQWNDLFKM-----------------------------------------------------------------------------

Query:  ---------CMLRTQREKMTSLRKKSFSSTASQVDEGQSSRKKDEVDEELMECFKILNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINRI
                       + K   L K+SF  T+SQVDE Q+S KKD++ EELMEC  ILNTMED+DGEAY+K+LKLLHGDLAWRKLFL MPDSRK+DFIN +
Subjt:  ---------CMLRTQREKMTSLRKKSFSSTASQVDEGQSSRKKDEVDEELMECFKILNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINRI

A0A5D3C5P0 L10-interacting MYB domain-containing protein-like1.2e-2843.41Show/hide
Query:  NGWDPLLGTITLEEEQWNDLFKMCML--------------------------------------------------------------------RTQREK
        NGWDPLL TI LEEEQWN+LFK+  +                                                                       + K
Subjt:  NGWDPLLGTITLEEEQWNDLFKMCML--------------------------------------------------------------------RTQREK

Query:  MTSLRKKSFSSTASQVDEGQSSRKKDEVDEELMECFKILNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINRI
           L K+SF  T+SQVDE Q+S KKD++ EELMEC  ILNTMED+DGEAY+K+LKLLHGDLAWRKLFL MPDSRK+DFIN +
Subjt:  MTSLRKKSFSSTASQVDEGQSSRKKDEVDEELMECFKILNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINRI

A0A5D3DBS2 L10-interacting MYB domain-containing protein-like4.0e-2740.65Show/hide
Query:  LSQKSSEKHCVDEVVEIDGLK-----NEGSWPD-----KNEARF-----------VDLMDEEVAN--DNRPTTTFTRTSWNYMKNQLNA-------KNGW
        +SQKS+E+ CVD+VVEID LK      E  W +     K   +F           V +  +  A   +  P+T     S +  +N + +       +N  
Subjt:  LSQKSSEKHCVDEVVEIDGLK-----NEGSWPD-----KNEARF-----------VDLMDEEVAN--DNRPTTTFTRTSWNYMKNQLNA-------KNGW

Query:  DPLLGTITLEEEQWNDLFKMCM---LRTQREKMTSLRKKSFSSTASQVDEGQSSRKKDEVDEELMECFKILNTMEDIDGEAYTKVLKLLHGDLAWRKLFL
                 +++++   F   +       + K   L K+SF  T+SQVDE Q+S KKD++ EELMEC  ILNTMED+DGEAY+K+LKLLHGDLAWRKLFL
Subjt:  DPLLGTITLEEEQWNDLFKMCM---LRTQREKMTSLRKKSFSSTASQVDEGQSSRKKDEVDEELMECFKILNTMEDIDGEAYTKVLKLLHGDLAWRKLFL

Query:  LMPDSRKKDFINRI
         MPDSRK+DFIN +
Subjt:  LMPDSRKKDFINRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGTCACAAAAATCATCCGAAAAACATTGTGTTGATGAGGTTGTTGAAATTGATGGATTGAAAAATGAAGGATCATGGCCAGACAAGAATGAAGCTCGATTTGTTGACTT
AATGGATGAAGAGGTTGCAAACGACAATCGACCAACCACAACATTTACAAGGACTAGTTGGAATTATATGAAGAACCAACTAAATGCTAAAAATGGTTGGGATCCATTAT
TGGGCACTATTACTCTAGAAGAGGAGCAATGGAATGATCTTTTTAAGATGTGTATGCTGAGAACGCAAAGAGAAAAAATGACATCCTTGAGAAAAAAATCTTTTAGTTCT
ACCGCTAGTCAAGTTGATGAGGGTCAATCATCAAGGAAAAAAGATGAAGTTGATGAAGAGCTGATGGAATGTTTCAAAATTTTAAATACAATGGAGGATATTGATGGAGA
GGCTTATACTAAAGTACTGAAACTTTTGCATGGAGATCTTGCTTGGAGAAAATTATTTTTGCTCATGCCTGATTCAAGGAAGAAAGATTTCATAAATAGAATCTAG
mRNA sequenceShow/hide mRNA sequence
TTGTCACAAAAATCATCCGAAAAACATTGTGTTGATGAGGTTGTTGAAATTGATGGATTGAAAAATGAAGGATCATGGCCAGACAAGAATGAAGCTCGATTTGTTGACTT
AATGGATGAAGAGGTTGCAAACGACAATCGACCAACCACAACATTTACAAGGACTAGTTGGAATTATATGAAGAACCAACTAAATGCTAAAAATGGTTGGGATCCATTAT
TGGGCACTATTACTCTAGAAGAGGAGCAATGGAATGATCTTTTTAAGATGTGTATGCTGAGAACGCAAAGAGAAAAAATGACATCCTTGAGAAAAAAATCTTTTAGTTCT
ACCGCTAGTCAAGTTGATGAGGGTCAATCATCAAGGAAAAAAGATGAAGTTGATGAAGAGCTGATGGAATGTTTCAAAATTTTAAATACAATGGAGGATATTGATGGAGA
GGCTTATACTAAAGTACTGAAACTTTTGCATGGAGATCTTGCTTGGAGAAAATTATTTTTGCTCATGCCTGATTCAAGGAAGAAAGATTTCATAAATAGAATCTAG
Protein sequenceShow/hide protein sequence
LSQKSSEKHCVDEVVEIDGLKNEGSWPDKNEARFVDLMDEEVANDNRPTTTFTRTSWNYMKNQLNAKNGWDPLLGTITLEEEQWNDLFKMCMLRTQREKMTSLRKKSFSS
TASQVDEGQSSRKKDEVDEELMECFKILNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINRI