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Lsi05G009000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G009000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDimer_Tnp_hAT domain-containing protein
Genome locationchr05:15894462..15895385
RNA-Seq ExpressionLsi05G009000
SyntenyLsi05G009000
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEX46472.1 zinc finger MYM-type protein 1 [Tanacetum cinerariifolium]2.6e-1363.77Show/hide
Query:  NNIINNTTTVVASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARK
        N ++   T  VASAERSFSKLKLIKSYLRS+MSQ+RLN LA+++IE DIL +VDY++LI +F S+ AR+
Subjt:  NNIINNTTTVVASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARK

KYP41318.1 Zinc finger MYM-type protein 5 [Cajanus cajan]1.4e-1463.33Show/hide
Query:  MEIQPIFRKKRMIQREKQFDENNIINNTTTVVASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARK
        M+I+P F +KR I         NIIN   T VA AERSFSKLKLIKSYLRSTM QDRLN LAILSIE  +L  +DY+ LI NFA+QK RK
Subjt:  MEIQPIFRKKRMIQREKQFDENNIINNTTTVVASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARK

PIN09162.1 hypothetical protein CDL12_18255 [Handroanthus impetiginosus]2.1e-1583.05Show/hide
Query:  VASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARK
        +ASAERSFSKLKLIKSYLRSTMSQ+RLN LAILSIEK+IL  +DY+NLI +FASQKARK
Subjt:  VASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARK

XP_012833173.1 PREDICTED: zinc finger MYM-type protein 1-like [Erythranthe guttata]1.5e-1368.12Show/hide
Query:  IINNTTTVVASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARKKI
        I+      VASAERSFSKLKLIKSYLRSTMSQ+RLN LA+LSIEKD+   +D+ +LI NFA+QKAR+ I
Subjt:  IINNTTTVVASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARKKI

XP_038697406.1 zinc finger MYM-type protein 1-like [Tripterygium wilfordii]9.0e-1469.57Show/hide
Query:  IINNTTTVVASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARKKI
        I+      VASAERSFSKLKLIKSYLRSTMSQ+RLN LA+LSIE D+  NVDY N+I +FASQ AR+ I
Subjt:  IINNTTTVVASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARKKI

TrEMBL top hitse value%identityAlignment
A0A151RFB6 Zinc finger MYM-type protein 56.7e-1563.33Show/hide
Query:  MEIQPIFRKKRMIQREKQFDENNIINNTTTVVASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARK
        M+I+P F +KR I         NIIN   T VA AERSFSKLKLIKSYLRSTM QDRLN LAILSIE  +L  +DY+ LI NFA+QK RK
Subjt:  MEIQPIFRKKRMIQREKQFDENNIINNTTTVVASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARK

A0A2G9GV96 Dimer_Tnp_hAT domain-containing protein1.0e-1583.05Show/hide
Query:  VASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARK
        +ASAERSFSKLKLIKSYLRSTMSQ+RLN LAILSIEK+IL  +DY+NLI +FASQKARK
Subjt:  VASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARK

A0A7N0RHC1 Uncharacterized protein9.7e-1463.77Show/hide
Query:  IINNTTTVVASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARKKI
        I+      VASAERSFSKLKL+K+YLRS+MSQ+RLN+L ILSIEKD+L N+DY  L+ +FAS+ AR+ I
Subjt:  IINNTTTVVASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARKKI

A0A7N0T5Y3 Uncharacterized protein1.1e-1465.22Show/hide
Query:  IINNTTTVVASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARKKI
        I+      VASAERSFSKLKL+K+YLRS+MSQ+RLN+LAILSIEKD+L N+DY  L+ +FAS+ AR+K+
Subjt:  IINNTTTVVASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARKKI

A0A7N0UCP2 Dimer_Tnp_hAT domain-containing protein7.4e-1463.77Show/hide
Query:  IINNTTTVVASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARKKI
        I+      VASAERSFSKLKL+K+YLRS+MSQ+RLN+L ILSIEKD+L N+DY  L+ +FAS+ AR+ I
Subjt:  IINNTTTVVASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARKKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G06500.1 hAT family dimerisation domain1.9e-1467.21Show/hide
Query:  VASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARKKI
        VASAERSFSKLKLIK+YLRSTMSQDRLN LAILSIE+ +L  +DY  ++ +FA + A + I
Subjt:  VASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARKKI

AT2G16040.1 hAT dimerisation domain-containing protein / transposase-related1.7e-0777.14Show/hide
Query:  VASAERSFSKLKLIKSYLRSTMSQDRLNELAILSI
        VA AER+FSKLKLIK YLRSTMSQ+RLN LA++S+
Subjt:  VASAERSFSKLKLIKSYLRSTMSQDRLNELAILSI

AT2G19960.1 hAT family dimerisation domain5.6e-1464.41Show/hide
Query:  VASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARK
        VASAERSFSKLKLIKSYLRS+MSQ+RL++LAILSIE+ ++  VD++ L  +F  +K R+
Subjt:  VASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARK

AT4G10200.1 TTF-type zinc finger protein with HAT dimerisation domain5.1e-1567.21Show/hide
Query:  VASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARKKI
        VASAERSFSKLKLIKSY RSTMS++RLN LAILSIE+D++  +DY +L+ +FA++ AR+ I
Subjt:  VASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARKKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATACAACCAATATTTCGTAAAAAACGAATGATTCAAAGAGAAAAACAATTTGATGAGAATAATATTATTAACAATACCACTACGGTTGTTGCTTCTGCTGAAAG
AAGCTTTTCAAAACTAAAATTAATTAAATCTTATTTAAGGTCAACTATGTCGCAAGACAGATTAAATGAATTGGCCATATTATCCATTGAAAAGGATATATTAATGAACG
TAGATTATCAAAATTTAATACAGAATTTTGCATCTCAAAAAGCAAGAAAAAAAATT
mRNA sequenceShow/hide mRNA sequence
CTAAAGAAATTGCAAATGATATGGAAATACAACCAATATTTCGTAAAAAACGAATGATTCAAAGAGAAAAACAATTTGATGAGAATAATATTATTAACAATACCACTACG
GTTGTTGCTTCTGCTGAAAGAAGCTTTTCAAAACTAAAATTAATTAAATCTTATTTAAGGTCAACTATGTCGCAAGACAGATTAAATGAATTGGCCATATTATCCATTGA
AAAGGATATATTAATGAACGTAGATTATCAAAATTTAATACAGAATTTTGCATCTCAAAAAGCAAGAAAAAAAATT
Protein sequenceShow/hide protein sequence
MEIQPIFRKKRMIQREKQFDENNIINNTTTVVASAERSFSKLKLIKSYLRSTMSQDRLNELAILSIEKDILMNVDYQNLIQNFASQKARKKI