CuGenDBv2

Gene ID	Lsi05G009040
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr05:16212314..16215719
RNA-Seq Expression	Lsi05G009040
Synteny	Lsi05G009040
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR038934 - Uncharacterized protein At5g64816-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7034400.1 hypothetical protein SDJN02_04128, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.9e-48

88.6

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Query:  IPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDVCLRR
        IPAVVA QAY+M RRHSEE ++KTAR REKN DDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTV GLSELDA TDACARTVCVNQH+VPN ND+CLRR
Subjt:  IPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDVCLRR

Query:  CQSECLKLSASHSS
        CQSECLKLSASHSS
Subjt:  CQSECLKLSASHSS

XP_004141962.1 uncharacterized protein At5g64816 [Cucumis sativus]

1.4e-48

88.14

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Query:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV
        +   IPAVVA Q YKM RRHSEE RIKTAR REKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTV GLSELDA TDACARTVCVNQH+VPN NDV
Subjt:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV

Query:  CLRRCQSECLKLSASHSS
        CLRRCQSECLKLSAS+SS
Subjt:  CLRRCQSECLKLSASHSS

XP_022950288.1 uncharacterized protein At5g64816 isoform X1 [Cucurbita moschata]

3.0e-48

85.59

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Query:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV
        +   IPAVVA QAY+M RRHSEE ++KTAR REKN DDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTV GLSELDA TDACARTVCVNQH+VPN ND+
Subjt:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV

Query:  CLRRCQSECLKLSASHSS
        CLRRCQSECLKLSASHSS
Subjt:  CLRRCQSECLKLSASHSS

XP_022950289.1 uncharacterized protein At5g64816 isoform X2 [Cucurbita moschata]

3.0e-48

85.59

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Query:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV
        +   IPAVVA QAY+M RRHSEE ++KTAR REKN DDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTV GLSELDA TDACARTVCVNQH+VPN ND+
Subjt:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV

Query:  CLRRCQSECLKLSASHSS
        CLRRCQSECLKLSASHSS
Subjt:  CLRRCQSECLKLSASHSS

XP_038881384.1 uncharacterized protein At5g64816 [Benincasa hispida]

2.3e-48

87.29

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Query:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV
        +   IPAVVA QAY+M RRHSEE RI+TAR REKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTV GLSELDA TDACARTVCVNQH+VPN NDV
Subjt:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV

Query:  CLRRCQSECLKLSASHSS
        CLRRCQSECLKLSA HSS
Subjt:  CLRRCQSECLKLSASHSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJ71 Uncharacterized protein

6.6e-49

88.14

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Query:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV
        +   IPAVVA Q YKM RRHSEE RIKTAR REKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTV GLSELDA TDACARTVCVNQH+VPN NDV
Subjt:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV

Query:  CLRRCQSECLKLSASHSS
        CLRRCQSECLKLSAS+SS
Subjt:  CLRRCQSECLKLSASHSS

A0A6J1GEH5 uncharacterized protein At5g64816 isoform X1

1.5e-48

85.59

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Query:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV
        +   IPAVVA QAY+M RRHSEE ++KTAR REKN DDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTV GLSELDA TDACARTVCVNQH+VPN ND+
Subjt:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV

Query:  CLRRCQSECLKLSASHSS
        CLRRCQSECLKLSASHSS
Subjt:  CLRRCQSECLKLSASHSS

A0A6J1GFD3 uncharacterized protein At5g64816 isoform X2

1.5e-48

85.59

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Query:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV
        +   IPAVVA QAY+M RRHSEE ++KTAR REKN DDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTV GLSELDA TDACARTVCVNQH+VPN ND+
Subjt:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV

Query:  CLRRCQSECLKLSASHSS
        CLRRCQSECLKLSASHSS
Subjt:  CLRRCQSECLKLSASHSS

A0A6J1IJU3 uncharacterized protein At5g64816-like isoform X1

7.3e-48

84.75

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Query:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV
        +   IPAVVA QAY+M RRHSEE +IKTAR REKN +DIFVCERVCTSKRMLKKVGSFSKDPIPDTC+TV GLSELDA TDACARTVCVNQH+VPN ND+
Subjt:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV

Query:  CLRRCQSECLKLSASHSS
        CLRRCQSECLKLSASHSS
Subjt:  CLRRCQSECLKLSASHSS

A0A6J1IRM4 uncharacterized protein At5g64816-like isoform X2

7.3e-48

84.75

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Query:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV
        +   IPAVVA QAY+M RRHSEE +IKTAR REKN +DIFVCERVCTSKRMLKKVGSFSKDPIPDTC+TV GLSELDA TDACARTVCVNQH+VPN ND+
Subjt:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV

Query:  CLRRCQSECLKLSASHSS
        CLRRCQSECLKLSASHSS
Subjt:  CLRRCQSECLKLSASHSS

SwissProt top hits

e value

%identity

Alignment

Q8L8Q8 Uncharacterized protein At5g64816

5.5e-45

75.42

Show/hide

Query:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV
        I   +PA++A QA+++ +RH EE RIK+AR REK+SD+IFVCERVCTSKRMLKKVG+FSKDPIPDTCVTV G+SELDA +DACARTVCVNQH+V N ND+
Subjt:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV

Query:  CLRRCQSECLKLSASHSS
        CLRRCQSECLKLS+S SS
Subjt:  CLRRCQSECLKLSASHSS

Arabidopsis top hits

e value

%identity

Alignment

AT5G64816.1 unknown protein

3.9e-46

75.42

Show/hide

Query:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV
        I   +PA++A QA+++ +RH EE RIK+AR REK+SD+IFVCERVCTSKRMLKKVG+FSKDPIPDTCVTV G+SELDA +DACARTVCVNQH+V N ND+
Subjt:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV

Query:  CLRRCQSECLKLSASHSS
        CLRRCQSECLKLS+S SS
Subjt:  CLRRCQSECLKLSASHSS

AT5G64816.2 unknown protein

3.9e-46

75.42

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Query:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV
        I   +PA++A QA+++ +RH EE RIK+AR REK+SD+IFVCERVCTSKRMLKKVG+FSKDPIPDTCVTV G+SELDA +DACARTVCVNQH+V N ND+
Subjt:  INPTIPAVVAEQAYKM-RRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDACARTVCVNQHKVPNCNDV

Query:  CLRRCQSECLKLSASHSS
        CLRRCQSECLKLS+S SS
Subjt:  CLRRCQSECLKLSASHSS

Sequences

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CDS sequence

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mRNA sequence

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ATGCAAGAAATAGGAATCAAGAACAAGGACAACACAATTGCGCAAGATTCAACATCAGGGCACGATCACCATCTCCAGCAAGAAATCAATCCTACTATTCCAGCAGTAGT
TGCAGAGCAAGCATACAAAATGAGGAGGCATTCTGAGGAACACAGAATAAAGACTGCTAGGGAAAGGGAGAAGAATTCGGATGACATTTTTGTCTGTGAGAGGGTCTGCA
CATCAAAGAGAATGTTGAAAAAGGTAGGGTCTTTCTCGAAAGACCCAATTCCTGATACTTGCGTGACTGTCCGTGGATTATCTGAACTTGATGCCTACACAGATGCATGC
GCTCGCACTGTTTGTGTGAACCAGCATAAAGTACCAAACTGCAATGACGTTTGTCTTAGGAGATGCCAGAGTGAATGTCTTAAGCTTTCGGCTTCACATTCATCTTAGCA
AATTCCTGTGCCTCCTGGCTCGATCCAGGTTCCTGATTCAAAAATTGATTGCATGGAAAAGCCAAGATCTCAAGTCCTGGAAATCAGGTCCATCATTGCACAAAAGAAGA
GGAGGAACCAATACCTAGGAAAAGAAGACGCACCATTTGGAAGCAACATTTACCACAAGAAGAACCTTTCCCCGGTAGATGCTAAGGTCCACGTCTTGTCCTCTGGCATC
CTTCAACAAGCCAAGAGACTTAACTTCGTAAATTTCCGTTTTGAAGCGTCTTTGGGAGGAGAACAAGCCAAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGCCAGGAAAGC
AGATGAGAATTTACCTTCACCACGAATTCATGAATGGACTTCTCAGAGACTGATTGAGAAGCACCCATTTTCTTCTCTCTCTTCTGTTCTTGTTCTTCTCAGGCAGGATA
TCCTGTTTATTGATGTTTTATAA

Protein sequence

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MQEIGIKNKDNTIAQDSTSGHDHHLQQEINPTIPAVVAEQAYKMRRHSEEHRIKTAREREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVRGLSELDAYTDAC
ARTVCVNQHKVPNCNDVCLRRCQSECLKLSASHSS

Lsi05G009040 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome