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Lsi05G009070 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G009070
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein PALE CRESS, chloroplastic
Genome locationchr05:16233850..16239588
RNA-Seq ExpressionLsi05G009070
SyntenyLsi05G009070
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0010239 - chloroplast mRNA processing (biological process)
GO:0048366 - leaf development (biological process)
GO:0009507 - chloroplast (cellular component)
InterPro domainsIPR034563 - Protein PALE CRESS


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036373.1 Protein PALE CRESS, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.1e-1497.87Show/hide
Query:  IKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
        +KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
Subjt:  IKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
XP_022159473.1 protein PALE CRESS, chloroplastic [Momordica charantia]1.4e-1468.35Show/hide
Query:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVECLTNVRDEMKGYQIRTKAKREESNVLPNYDAND
        KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE     R+        T A R  + +L  YD  D
Subjt:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVECLTNVRDEMKGYQIRTKAKREESNVLPNYDAND
XP_022931090.1 protein PALE CRESS, chloroplastic [Cucurbita moschata]1.4e-14100Show/hide
Query:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
        KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
Subjt:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
XP_022995861.1 protein PALE CRESS, chloroplastic [Cucurbita maxima]1.4e-14100Show/hide
Query:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
        KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
Subjt:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
XP_023534033.1 protein PALE CRESS, chloroplastic [Cucurbita pepo subsp. pepo]1.4e-14100Show/hide
Query:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
        KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
Subjt:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
TrEMBL top hitse value%identityAlignment
A0A022S2N8 Uncharacterized protein8.7e-1597.83Show/hide
Query:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
        KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDA+RSLDLLYRRVE
Subjt:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
A0A6J1DYX0 protein PALE CRESS, chloroplastic6.6e-1568.35Show/hide
Query:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVECLTNVRDEMKGYQIRTKAKREESNVLPNYDAND
        KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE     R+        T A R  + +L  YD  D
Subjt:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVECLTNVRDEMKGYQIRTKAKREESNVLPNYDAND
A0A6J1EYI4 protein PALE CRESS, chloroplastic6.6e-15100Show/hide
Query:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
        KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
Subjt:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
A0A6J1K329 protein PALE CRESS, chloroplastic6.6e-15100Show/hide
Query:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
        KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
Subjt:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
A0A6P4AA29 protein PALE CRESS, chloroplastic-like1.1e-1497.83Show/hide
Query:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
        KIEEAAEKGELTELVL+VIWNRLDLARRDDEKDAIRSLDLLYRRVE
Subjt:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
SwissProt top hitse value%identityAlignment
Q39089 Protein PALE CRESS, chloroplastic4.4e-1691.3Show/hide
Query:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
        +IEEAAEKGEL ELVL++IWNRLDLARRDDEKDAIRSLDLLYRRVE
Subjt:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
Arabidopsis top hitse value%identityAlignment
AT2G48120.1 pale cress protein (PAC)3.2e-1791.3Show/hide
Query:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
        +IEEAAEKGEL ELVL++IWNRLDLARRDDEKDAIRSLDLLYRRVE
Subjt:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
AT2G48120.2 pale cress protein (PAC)3.2e-1791.3Show/hide
Query:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE
        +IEEAAEKGEL ELVL++IWNRLDLARRDDEKDAIRSLDLLYRRVE
Subjt:  KIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTATAAAAATTGAAGAGGCTGCTGAGAAAGGGGAACTAACAGAGCTTGTTCTATTAGTCATATGGAATCGGCTTGATTTAGCACGTCGTGATGATGAAAAGGATGC
AATTAGAAGTCTTGATCTGCTATATCGAAGGGTAGAGTGTCTAACTAATGTAAGAGATGAAATGAAAGGGTATCAAATAAGGACAAAAGCAAAGAGGGAGGAAAGTAATG
TCCTCCCAAACTATGATGCAAATGATTTGAACATTATGGATGGAGAAGAGATGGAGGATGAAATGGAAGTTGGTGGATCAAGTATTAGAACATCTAGAAAACGAGCAAAC
ATGACTGGCAGTGTGAGTTTTGTGGAGAAAGAGAAGGAATTTCCAAAGAAGTCCATCTCAATCACAAGCAAAGCTCGAACTAAGGGAGCAATGGATAAATTTGTATATCC
AAATTCAGCCAAGGTTGTTGATGATTGGAATAGATTAAAGAACCTGAAGCAATTAAGCATCACTAAAAAATACATCAAAGAAGAAGAAATGTTGCAGTTCGATTTATCAT
GCGTTGGATTTATCAAACTTTATACCTCAAGAGGGCAGTATTCAGGCCTTGATAATCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTATAAAAATTGAAGAGGCTGCTGAGAAAGGGGAACTAACAGAGCTTGTTCTATTAGTCATATGGAATCGGCTTGATTTAGCACGTCGTGATGATGAAAAGGATGC
AATTAGAAGTCTTGATCTGCTATATCGAAGGGTAGAGTGTCTAACTAATGTAAGAGATGAAATGAAAGGGTATCAAATAAGGACAAAAGCAAAGAGGGAGGAAAGTAATG
TCCTCCCAAACTATGATGCAAATGATTTGAACATTATGGATGGAGAAGAGATGGAGGATGAAATGGAAGTTGGTGGATCAAGTATTAGAACATCTAGAAAACGAGCAAAC
ATGACTGGCAGTGTGAGTTTTGTGGAGAAAGAGAAGGAATTTCCAAAGAAGTCCATCTCAATCACAAGCAAAGCTCGAACTAAGGGAGCAATGGATAAATTTGTATATCC
AAATTCAGCCAAGGTTGTTGATGATTGGAATAGATTAAAGAACCTGAAGCAATTAAGCATCACTAAAAAATACATCAAAGAAGAAGAAATGTTGCAGTTCGATTTATCAT
GCGTTGGATTTATCAAACTTTATACCTCAAGAGGGCAGTATTCAGGCCTTGATAATCGCTAA
Protein sequenceShow/hide protein sequence
MIIKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVECLTNVRDEMKGYQIRTKAKREESNVLPNYDANDLNIMDGEEMEDEMEVGGSSIRTSRKRAN
MTGSVSFVEKEKEFPKKSISITSKARTKGAMDKFVYPNSAKVVDDWNRLKNLKQLSITKKYIKEEEMLQFDLSCVGFIKLYTSRGQYSGLDNR