; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G009110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G009110
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:16291585..16292031
RNA-Seq ExpressionLsi05G009110
SyntenyLsi05G009110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057288.1 hypothetical protein E6C27_scaffold280G001290 [Cucumis melo var. makuwa]9.3e-2960.13Show/hide
Query:  MGRNSKSSKRN-PFCEKLLKAFGV--YPKIIKFSPSPSRQE----EQPNYPQQIHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQD-VNDVFSDYINRA
        MGRN KSS  N PFCEKLLKAFG+   PKI K SPS S  E    +Q N  Q I++H +    P IM+ K  +S +NK G   GD+D VNDVFS+YINRA
Subjt:  MGRNSKSSKRN-PFCEKLLKAFGV--YPKIIKFSPSPSRQE----EQPNYPQQIHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQD-VNDVFSDYINRA

Query:  KRRLGSISSKR--SHDSSSKGKEN-LK-DDRRFSDYIIRARNKLKATSSSVGFTISSS
        KRRLG+I+SK+  ++DSS KGKEN LK +DRRFSDYI RAR+KL+ATSSSVG T + S
Subjt:  KRRLGSISSKR--SHDSSSKGKEN-LK-DDRRFSDYIIRARNKLKATSSSVGFTISSS

KAG6571440.1 hypothetical protein SDJN03_28168, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2354.29Show/hide
Query:  MGRNSKSSKRNPFCEKLLKAFGVYPKIIKFSPSPSRQEEQPNYPQQIHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQDVNDVFSDYINRAKRRLGSIS
        MG+N+KSSKR+  CE+ LKA G+        PSP+R EE                 PE+  K+  N +      K    + ND FSDYINRAKRRLGSIS
Subjt:  MGRNSKSSKRNPFCEKLLKAFGVYPKIIKFSPSPSRQEEQPNYPQQIHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQDVNDVFSDYINRAKRRLGSIS

Query:  SKRSHDSSSKGKENLKDDRRFSDYIIRARNKLKATSSSVG
        SKR HD SSKGKENLK+DRRF+DYIIRARN+L+ATSS+VG
Subjt:  SKRSHDSSSKGKENLKDDRRFSDYIIRARNKLKATSSSVG

KAG6606435.1 hypothetical protein SDJN03_03752, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3263.31Show/hide
Query:  MGRNSKSSKRNPFCEKLLKAFGVYPKIIKFSPSPSRQEEQPNYPQQIHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQDVNDVFSDYINRAKRRLGSIS
        MGRNSKSSKRNP CEKLLKA G+YP+I+KF P P+RQEE P      H +       +I D +V+         +   +DVNDVFSDYI+RAKRRLGSIS
Subjt:  MGRNSKSSKRNPFCEKLLKAFGVYPKIIKFSPSPSRQEEQPNYPQQIHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQDVNDVFSDYINRAKRRLGSIS

Query:  SKRSHDSSSKGKENLKDDRRFSDYIIRARNKLKATSSSV
        SKR HD SS+GKEN+K+D RFSDYI+RARNKLKATSSSV
Subjt:  SKRSHDSSSKGKENLKDDRRFSDYIIRARNKLKATSSSV

KGN47879.1 hypothetical protein Csa_004306 [Cucumis sativus]3.1e-2456.33Show/hide
Query:  MGRNSKSSKRN-PFCEKLLKAFGV--YPKIIKFSPSPSRQE-----EQPNYPQQIHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQD-VNDVFSDYINR
        MG+NSKSS  N PFCEKLLKAFG+   PKI K S S S  E     +Q N  Q I++H +    P +M+ K  +S NNK     GD+D VN  FS+YINR
Subjt:  MGRNSKSSKRN-PFCEKLLKAFGV--YPKIIKFSPSPSRQE-----EQPNYPQQIHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQD-VNDVFSDYINR

Query:  AKRRLGSISSKR-SHDSSSKGKE-NLK-DDRRFSDYIIRARNKLKATSSSVGFTISSS
        AKRRL +++SK+ S+DSSS+GKE NLK +DRRFSDYI+RARNKL++TSSSVG   + S
Subjt:  AKRRLGSISSKR-SHDSSSKGKE-NLK-DDRRFSDYIIRARNKLKATSSSVGFTISSS

XP_021803981.1 uncharacterized protein LOC110748293 [Prunus avium]8.5e-0634.31Show/hide
Query:  VYPKIIKFSPSPSRQEEQPNYPQQ---------IHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQDVNDVFSDYINRAKRRLGSISSKR--SHDSSSKG
        V P    +S +  +++++P + +          +H H+ A    E    +V+N      G K G  D+ND FS+YIN+AK ++ ++SS +    D  +K 
Subjt:  VYPKIIKFSPSPSRQEEQPNYPQQ---------IHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQDVNDVFSDYINRAKRRLGSISSKR--SHDSSSKG

Query:  KENLKDDRRFSDYIIRARNKLKATSSSVGFTISSSRK
        KE++KD   FSDYI RA+NK K+T S++G   S+S K
Subjt:  KENLKDDRRFSDYIIRARNKLKATSSSVGFTISSSRK

TrEMBL top hitse value%identityAlignment
A0A0A0KG94 Uncharacterized protein1.5e-2456.33Show/hide
Query:  MGRNSKSSKRN-PFCEKLLKAFGV--YPKIIKFSPSPSRQE-----EQPNYPQQIHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQD-VNDVFSDYINR
        MG+NSKSS  N PFCEKLLKAFG+   PKI K S S S  E     +Q N  Q I++H +    P +M+ K  +S NNK     GD+D VN  FS+YINR
Subjt:  MGRNSKSSKRN-PFCEKLLKAFGV--YPKIIKFSPSPSRQE-----EQPNYPQQIHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQD-VNDVFSDYINR

Query:  AKRRLGSISSKR-SHDSSSKGKE-NLK-DDRRFSDYIIRARNKLKATSSSVGFTISSS
        AKRRL +++SK+ S+DSSS+GKE NLK +DRRFSDYI+RARNKL++TSSSVG   + S
Subjt:  AKRRLGSISSKR-SHDSSSKGKE-NLK-DDRRFSDYIIRARNKLKATSSSVGFTISSS

A0A314Z5U6 Uncharacterized protein9.2e-0633.1Show/hide
Query:  YPKIIKFSPSPSRQEEQPNYPQQIHIHDQANAPPEIMDKKVQNSSNNKL---------------GNKSGDQDVNDVFSDYINRAKRRLGSISSKR--SHD
        YPK  +    P   E QP+        +Q    P+  D  ++ +    L               G K G  D+ND FS+YIN+AK ++ ++SS      D
Subjt:  YPKIIKFSPSPSRQEEQPNYPQQIHIHDQANAPPEIMDKKVQNSSNNKL---------------GNKSGDQDVNDVFSDYINRAKRRLGSISSKR--SHD

Query:  SSSKGKENLKDDRRFSDYIIRARNKLKATSSSVGFTISSSRK
          +K KE++KD   FSDYI RA+NK K+T S++G   ++S K
Subjt:  SSSKGKENLKDDRRFSDYIIRARNKLKATSSSVGFTISSSRK

A0A5D3CQZ7 Uncharacterized protein4.5e-2960.13Show/hide
Query:  MGRNSKSSKRN-PFCEKLLKAFGV--YPKIIKFSPSPSRQE----EQPNYPQQIHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQD-VNDVFSDYINRA
        MGRN KSS  N PFCEKLLKAFG+   PKI K SPS S  E    +Q N  Q I++H +    P IM+ K  +S +NK G   GD+D VNDVFS+YINRA
Subjt:  MGRNSKSSKRN-PFCEKLLKAFGV--YPKIIKFSPSPSRQE----EQPNYPQQIHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQD-VNDVFSDYINRA

Query:  KRRLGSISSKR--SHDSSSKGKEN-LK-DDRRFSDYIIRARNKLKATSSSVGFTISSS
        KRRLG+I+SK+  ++DSS KGKEN LK +DRRFSDYI RAR+KL+ATSSSVG T + S
Subjt:  KRRLGSISSKR--SHDSSSKGKEN-LK-DDRRFSDYIIRARNKLKATSSSVGFTISSS

A0A5E4EGF6 PREDICTED: PHAVU_001G147900g1.6e-0533.1Show/hide
Query:  EKLLKAFGVYPKIIKFSPSPSRQEEQPNYPQQ---------IHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQDVNDVFSDYINRAKRRLGSISSKR--
        E+  K     P    +S +  +++++P + +          ++ HD A    E    +V+N      G K G  D+ND FS+YIN+AK ++ ++SS    
Subjt:  EKLLKAFGVYPKIIKFSPSPSRQEEQPNYPQQ---------IHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQDVNDVFSDYINRAKRRLGSISSKR--

Query:  SHDSSSKGKENLKDDRRFSDYIIRARNKLKATSSSVGFTISSSRK
          D  +K KE++KD   FSDYI RA+NK K+T S++G   S+S K
Subjt:  SHDSSSKGKENLKDDRRFSDYIIRARNKLKATSSSVGFTISSSRK

A0A6P5RSE8 uncharacterized protein LOC1107482934.1e-0634.31Show/hide
Query:  VYPKIIKFSPSPSRQEEQPNYPQQ---------IHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQDVNDVFSDYINRAKRRLGSISSKR--SHDSSSKG
        V P    +S +  +++++P + +          +H H+ A    E    +V+N      G K G  D+ND FS+YIN+AK ++ ++SS +    D  +K 
Subjt:  VYPKIIKFSPSPSRQEEQPNYPQQ---------IHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQDVNDVFSDYINRAKRRLGSISSKR--SHDSSSKG

Query:  KENLKDDRRFSDYIIRARNKLKATSSSVGFTISSSRK
        KE++KD   FSDYI RA+NK K+T S++G   S+S K
Subjt:  KENLKDDRRFSDYIIRARNKLKATSSSVGFTISSSRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGAAACTCCAAATCTTCCAAGCGCAATCCTTTTTGCGAGAAGCTTCTCAAGGCCTTTGGCGTTTATCCTAAAATCATCAAATTCAGTCCTTCCCCAAGCCGGCA
AGAAGAACAACCCAACTATCCTCAGCAAATTCATATTCATGATCAAGCTAATGCCCCACCTGAAATAATGGACAAAAAAGTACAAAACTCGTCCAACAACAAATTGGGGA
ATAAATCAGGAGACCAAGATGTTAACGATGTGTTTAGCGATTACATAAATCGGGCTAAACGCAGGCTGGGAAGCATATCAAGCAAGCGATCACATGATTCGAGTAGCAAA
GGAAAAGAGAACCTCAAAGATGATCGTCGTTTTTCAGATTATATTATTCGTGCTAGGAATAAGCTGAAGGCTACCTCCTCAAGTGTGGGATTCACTATAAGTAGCTCCAG
AAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGAAACTCCAAATCTTCCAAGCGCAATCCTTTTTGCGAGAAGCTTCTCAAGGCCTTTGGCGTTTATCCTAAAATCATCAAATTCAGTCCTTCCCCAAGCCGGCA
AGAAGAACAACCCAACTATCCTCAGCAAATTCATATTCATGATCAAGCTAATGCCCCACCTGAAATAATGGACAAAAAAGTACAAAACTCGTCCAACAACAAATTGGGGA
ATAAATCAGGAGACCAAGATGTTAACGATGTGTTTAGCGATTACATAAATCGGGCTAAACGCAGGCTGGGAAGCATATCAAGCAAGCGATCACATGATTCGAGTAGCAAA
GGAAAAGAGAACCTCAAAGATGATCGTCGTTTTTCAGATTATATTATTCGTGCTAGGAATAAGCTGAAGGCTACCTCCTCAAGTGTGGGATTCACTATAAGTAGCTCCAG
AAAGTGA
Protein sequenceShow/hide protein sequence
MGRNSKSSKRNPFCEKLLKAFGVYPKIIKFSPSPSRQEEQPNYPQQIHIHDQANAPPEIMDKKVQNSSNNKLGNKSGDQDVNDVFSDYINRAKRRLGSISSKRSHDSSSK
GKENLKDDRRFSDYIIRARNKLKATSSSVGFTISSSRK