CuGenDBv2

Gene ID	Lsi05G009320
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	titin-like isoform X2
Genome location	chr05:16483228..16485415
RNA-Seq Expression	Lsi05G009320
Synteny	Lsi05G009320
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022155568.1 uncharacterized protein LOC111022677 isoform X1 [Momordica charantia]

2.4e-71

67.34

Show/hide

Query:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL
        M  +LPSPEQ + SIEKTRSQLR+R K++ SSSSKKRAKK YPSVIRRSERIQN V PY+NR+IEPVVEEI VS+SE EDEP  +G K LDEP+S  QNL
Subjt:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL

Query:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPID----------------------VQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKM
          K+DYVVKLLETQ + IK  + KN    LL+E LSP +                      VQ LMDEN QLT+KLETALCKVEAYEKGN+NFSEVLEK+
Subjt:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPID----------------------VQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKM

Query:  KDVILVSNLTKVTETAVNASSQAIRDAMFPGTGRQAKPSAAKRKKVTK
        KDV+LVSNLTKVTETAVNASSQAIR+AM  G GR+AK SAAK KK TK
Subjt:  KDVILVSNLTKVTETAVNASSQAIRDAMFPGTGRQAKPSAAKRKKVTK

XP_022155571.1 uncharacterized protein LOC111022677 isoform X3 [Momordica charantia]

2.1e-72

69.87

Show/hide

Query:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL
        M  +LPSPEQ + SIEKTRSQLR+R K++ SSSSKKRAKK YPSVIRRSERIQN V PY+NR+IEPVVEEI VS+SE EDEP  +G K LDEP+S  QNL
Subjt:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL

Query:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPID-------------VQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKMKDVILVSNL
          K+DYVVKLLETQ + IK  + KN    LL+E LSP +             VQ LMDEN QLT+KLETALCKVEAYEKGN+NFSEVLEK+KDV+LVSNL
Subjt:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPID-------------VQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKMKDVILVSNL

Query:  TKVTETAVNASSQAIRDAMFPGTGRQAKPSAAKRKKVTK
        TKVTETAVNASSQAIR+AM  G GR+AK SAAK KK TK
Subjt:  TKVTETAVNASSQAIRDAMFPGTGRQAKPSAAKRKKVTK

XP_022155572.1 uncharacterized protein LOC111022677 isoform X4 [Momordica charantia]

2.6e-70

69.04

Show/hide

Query:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL
        M  +LPSPEQ + SIEKTRSQLR+R K++ SSSSKKRAKK YPSVIRRSERIQN V PY+NR+IEPVVEEI VS+SE EDEP  +G K LDEP+S  QNL
Subjt:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL

Query:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPID-------------VQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKMKDVILVSNL
          K+DYVVKLLETQ + IK          LL+E LSP +             VQ LMDEN QLT+KLETALCKVEAYEKGN+NFSEVLEK+KDV+LVSNL
Subjt:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPID-------------VQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKMKDVILVSNL

Query:  TKVTETAVNASSQAIRDAMFPGTGRQAKPSAAKRKKVTK
        TKVTETAVNASSQAIR+AM  G GR+AK SAAK KK TK
Subjt:  TKVTETAVNASSQAIRDAMFPGTGRQAKPSAAKRKKVTK

XP_022155573.1 uncharacterized protein LOC111022677 isoform X5 [Momordica charantia]

3.5e-75

73.89

Show/hide

Query:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL
        M  +LPSPEQ + SIEKTRSQLR+R K++ SSSSKKRAKK YPSVIRRSERIQN V PY+NR+IEPVVEEI VS+SE EDEP  +G K LDEP+S  QNL
Subjt:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL

Query:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPIDVQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKMKDVILVSNLTKVTETAVNASSQ
          K+DYVVKLLETQ + IK  + KN    LL+E LSP +VQ LMDEN QLT+KLETALCKVEAYEKGN+NFSEVLEK+KDV+LVSNLTKVTETAVNASSQ
Subjt:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPIDVQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKMKDVILVSNLTKVTETAVNASSQ

Query:  AIRDAMFPGTGRQAKPSAAKRKKVTK
        AIR+AM  G GR+AK SAAK KK TK
Subjt:  AIRDAMFPGTGRQAKPSAAKRKKVTK

XP_022155574.1 uncharacterized protein LOC111022677 isoform X6 [Momordica charantia]

4.3e-73

73.01

Show/hide

Query:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL
        M  +LPSPEQ + SIEKTRSQLR+R K++ SSSSKKRAKK YPSVIRRSERIQN V PY+NR+IEPVVEEI VS+SE EDEP  +G K LDEP+S  QNL
Subjt:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL

Query:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPIDVQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKMKDVILVSNLTKVTETAVNASSQ
          K+DYVVKLLETQ + IK          LL+E LSP +VQ LMDEN QLT+KLETALCKVEAYEKGN+NFSEVLEK+KDV+LVSNLTKVTETAVNASSQ
Subjt:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPIDVQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKMKDVILVSNLTKVTETAVNASSQ

Query:  AIRDAMFPGTGRQAKPSAAKRKKVTK
        AIR+AM  G GR+AK SAAK KK TK
Subjt:  AIRDAMFPGTGRQAKPSAAKRKKVTK

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DNB7 uncharacterized protein LOC111022677 isoform X5

1.7e-75

73.89

Show/hide

Query:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL
        M  +LPSPEQ + SIEKTRSQLR+R K++ SSSSKKRAKK YPSVIRRSERIQN V PY+NR+IEPVVEEI VS+SE EDEP  +G K LDEP+S  QNL
Subjt:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL

Query:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPIDVQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKMKDVILVSNLTKVTETAVNASSQ
          K+DYVVKLLETQ + IK  + KN    LL+E LSP +VQ LMDEN QLT+KLETALCKVEAYEKGN+NFSEVLEK+KDV+LVSNLTKVTETAVNASSQ
Subjt:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPIDVQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKMKDVILVSNLTKVTETAVNASSQ

Query:  AIRDAMFPGTGRQAKPSAAKRKKVTK
        AIR+AM  G GR+AK SAAK KK TK
Subjt:  AIRDAMFPGTGRQAKPSAAKRKKVTK

A0A6J1DPQ4 uncharacterized protein LOC111022677 isoform X4

1.3e-70

69.04

Show/hide

Query:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL
        M  +LPSPEQ + SIEKTRSQLR+R K++ SSSSKKRAKK YPSVIRRSERIQN V PY+NR+IEPVVEEI VS+SE EDEP  +G K LDEP+S  QNL
Subjt:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL

Query:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPID-------------VQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKMKDVILVSNL
          K+DYVVKLLETQ + IK          LL+E LSP +             VQ LMDEN QLT+KLETALCKVEAYEKGN+NFSEVLEK+KDV+LVSNL
Subjt:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPID-------------VQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKMKDVILVSNL

Query:  TKVTETAVNASSQAIRDAMFPGTGRQAKPSAAKRKKVTK
        TKVTETAVNASSQAIR+AM  G GR+AK SAAK KK TK
Subjt:  TKVTETAVNASSQAIRDAMFPGTGRQAKPSAAKRKKVTK

A0A6J1DQN4 uncharacterized protein LOC111022677 isoform X1

1.1e-71

67.34

Show/hide

Query:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL
        M  +LPSPEQ + SIEKTRSQLR+R K++ SSSSKKRAKK YPSVIRRSERIQN V PY+NR+IEPVVEEI VS+SE EDEP  +G K LDEP+S  QNL
Subjt:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL

Query:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPID----------------------VQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKM
          K+DYVVKLLETQ + IK  + KN    LL+E LSP +                      VQ LMDEN QLT+KLETALCKVEAYEKGN+NFSEVLEK+
Subjt:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPID----------------------VQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKM

Query:  KDVILVSNLTKVTETAVNASSQAIRDAMFPGTGRQAKPSAAKRKKVTK
        KDV+LVSNLTKVTETAVNASSQAIR+AM  G GR+AK SAAK KK TK
Subjt:  KDVILVSNLTKVTETAVNASSQAIRDAMFPGTGRQAKPSAAKRKKVTK

A0A6J1DQN9 uncharacterized protein LOC111022677 isoform X6

2.1e-73

73.01

Show/hide

Query:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL
        M  +LPSPEQ + SIEKTRSQLR+R K++ SSSSKKRAKK YPSVIRRSERIQN V PY+NR+IEPVVEEI VS+SE EDEP  +G K LDEP+S  QNL
Subjt:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL

Query:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPIDVQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKMKDVILVSNLTKVTETAVNASSQ
          K+DYVVKLLETQ + IK          LL+E LSP +VQ LMDEN QLT+KLETALCKVEAYEKGN+NFSEVLEK+KDV+LVSNLTKVTETAVNASSQ
Subjt:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPIDVQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKMKDVILVSNLTKVTETAVNASSQ

Query:  AIRDAMFPGTGRQAKPSAAKRKKVTK
        AIR+AM  G GR+AK SAAK KK TK
Subjt:  AIRDAMFPGTGRQAKPSAAKRKKVTK

A0A6J1DS13 uncharacterized protein LOC111022677 isoform X3

1.0e-72

69.87

Show/hide

Query:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL
        M  +LPSPEQ + SIEKTRSQLR+R K++ SSSSKKRAKK YPSVIRRSERIQN V PY+NR+IEPVVEEI VS+SE EDEP  +G K LDEP+S  QNL
Subjt:  MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNL

Query:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPID-------------VQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKMKDVILVSNL
          K+DYVVKLLETQ + IK  + KN    LL+E LSP +             VQ LMDEN QLT+KLETALCKVEAYEKGN+NFSEVLEK+KDV+LVSNL
Subjt:  QEKVDYVVKLLETQEKIIKAWQAKNDENPLLNEGLSPID-------------VQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKMKDVILVSNL

Query:  TKVTETAVNASSQAIRDAMFPGTGRQAKPSAAKRKKVTK
        TKVTETAVNASSQAIR+AM  G GR+AK SAAK KK TK
Subjt:  TKVTETAVNASSQAIRDAMFPGTGRQAKPSAAKRKKVTK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAGCCAGAACTTCCGAGTCCTGAACAAGCCGATCTTTCCATTGAGAAAACAAGATCACAACTGCGCTTGAGAACAAAATCAACTTTTTCCTCTTCCTCAAAGAAGAG
GGCAAAGAAGTTCTACCCCTCTGTGATTCGGCGGTCTGAACGGATTCAAAATGCCGTTCTGCCGTATGAAAATCGCAACATAGAACCTGTGGTTGAAGAAATACCTGTTA
GTGAGAGTGAAAGTGAAGATGAGCCACCAGTTGAGGGCAGAAAGCACTTGGATGAACCAAGCTCGAGTGGACAGAATTTGCAGGAAAAAGTTGATTATGTAGTTAAACTA
CTTGAAACTCAAGAAAAAATCATAAAGGCATGGCAAGCTAAGAATGATGAGAATCCATTGCTGAATGAAGGCTTATCACCAATAGATGTTCAAGCCTTAATGGACGAAAA
CCATCAGCTTACTAAGAAGTTGGAAACAGCTCTTTGTAAAGTTGAAGCATATGAGAAAGGGAACAGAAATTTTTCTGAGGTGCTGGAGAAAATGAAGGATGTGATCTTAG
TCTCCAATCTCACAAAAGTTACTGAAACGGCTGTCAATGCTTCTTCTCAAGCAATTCGTGATGCTATGTTTCCAGGCACAGGTCGTCAAGCCAAGCCTTCTGCAGCTAAG
AGAAAGAAGGTTACAAAACAAAGTGAAAAGAGCTGA

mRNA sequence

Show/hide mRNA sequence

AGATAGCAGAGTAAGAGAGGGTCTAAGGAAAAGAAAGAGTCGAGCCAAACGTCACCTAATATTTACTATCACCATCACCACCTTCTTCTCTCCAAACTCGCTTCTTCAAG
CTTCCCTTCTGCTTCTGCTTCTGCTTCTGCAACTTAAGAGGGAAAACGTACTCATTTTTTGTCAAAGAACTTCATAGCCAAAGGCACAAAATCCCTCCTAATTGCAAATG
GAGCCAGAACTTCCGAGTCCTGAACAAGCCGATCTTTCCATTGAGAAAACAAGATCACAACTGCGCTTGAGAACAAAATCAACTTTTTCCTCTTCCTCAAAGAAGAGGGC
AAAGAAGTTCTACCCCTCTGTGATTCGGCGGTCTGAACGGATTCAAAATGCCGTTCTGCCGTATGAAAATCGCAACATAGAACCTGTGGTTGAAGAAATACCTGTTAGTG
AGAGTGAAAGTGAAGATGAGCCACCAGTTGAGGGCAGAAAGCACTTGGATGAACCAAGCTCGAGTGGACAGAATTTGCAGGAAAAAGTTGATTATGTAGTTAAACTACTT
GAAACTCAAGAAAAAATCATAAAGGCATGGCAAGCTAAGAATGATGAGAATCCATTGCTGAATGAAGGCTTATCACCAATAGATGTTCAAGCCTTAATGGACGAAAACCA
TCAGCTTACTAAGAAGTTGGAAACAGCTCTTTGTAAAGTTGAAGCATATGAGAAAGGGAACAGAAATTTTTCTGAGGTGCTGGAGAAAATGAAGGATGTGATCTTAGTCT
CCAATCTCACAAAAGTTACTGAAACGGCTGTCAATGCTTCTTCTCAAGCAATTCGTGATGCTATGTTTCCAGGCACAGGTCGTCAAGCCAAGCCTTCTGCAGCTAAGAGA
AAGAAGGTTACAAAACAAAGTGAAAAGAGCTGAAAATGTTGCATTTGTAATTTTTTTTTAACTTGAGAGGAACTCGTCCTCCTGTTCCTTTGTTGAGCTGTTATGTATAA
TGTAATACTCTGATCTTTGTTTTTCCAGTTAATGACATGTTTTGGAGGTTGTCAAAA

Protein sequence

Show/hide protein sequence

MEPELPSPEQADLSIEKTRSQLRLRTKSTFSSSSKKRAKKFYPSVIRRSERIQNAVLPYENRNIEPVVEEIPVSESESEDEPPVEGRKHLDEPSSSGQNLQEKVDYVVKL
LETQEKIIKAWQAKNDENPLLNEGLSPIDVQALMDENHQLTKKLETALCKVEAYEKGNRNFSEVLEKMKDVILVSNLTKVTETAVNASSQAIRDAMFPGTGRQAKPSAAK
RKKVTKQSEKS

Lsi05G009320 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome