; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G009370 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G009370
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibosome-recycling factor, chloroplastic
Genome locationchr05:16505522..16510088
RNA-Seq ExpressionLsi05G009370
SyntenyLsi05G009370
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0032544 - plastid translation (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domainsIPR002661 - Ribosome recycling factor
IPR023584 - Ribosome recycling factor domain
IPR036191 - RRF superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057317.1 ribosome-recycling factor [Cucumis melo var. makuwa]3.3e-12290.44Show/hide
Query:  GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAA------LRGVVRAATIEEIEAEKTLIEKDVKARMEKT
        GL CVKCGSS+AHLCSWKSASNYV+LN+ AL+LSTQLSVSGN+LKNRHV  FYFVYFL  L A      L GVVRAATIEEIEAEKTLIEKDVKARMEKT
Subjt:  GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAA------LRGVVRAATIEEIEAEKTLIEKDVKARMEKT

Query:  IDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKV
        IDTVRS+FNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKV
Subjt:  IDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKV

Query:  VAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEKVWSISTDL
        VAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKID ++KQKEKV SIS +L
Subjt:  VAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEKVWSISTDL

XP_008449432.1 PREDICTED: ribosome-recycling factor, chloroplastic isoform X1 [Cucumis melo]1.3e-12185.71Show/hide
Query:  MATPFSSTTTSVRRSVFQPKQNPPLKALLSLR----GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAAL
        MATPFS+ TTS+RRS+F    NPP K LLSLR    GL CVKCGSS+AHLCSWKSASNYV+LN+ AL+LSTQLSVSGN+LKNR                 
Subjt:  MATPFSSTTTSVRRSVFQPKQNPPLKALLSLR----GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAAL

Query:  RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD
        RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRS+FNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD
Subjt:  RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD

Query:  LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK
        LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKID ++KQKEK
Subjt:  LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK

XP_008449433.1 PREDICTED: ribosome-recycling factor, chloroplastic isoform X2 [Cucumis melo]8.2e-12185.37Show/hide
Query:  MATPFSSTTTSVRRSVFQPKQNPPLKALLSLR----GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAAL
        MATPFS+ TTS+RRS+F    NPP K LLSLR    GL CVKCGSS+AHLCSWKSASNYV+LN+ AL+LSTQLSVSGN+LKN                  
Subjt:  MATPFSSTTTSVRRSVFQPKQNPPLKALLSLR----GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAAL

Query:  RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD
        RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRS+FNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD
Subjt:  RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD

Query:  LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK
        LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKID ++KQKEK
Subjt:  LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK

XP_038888223.1 ribosome-recycling factor, chloroplastic isoform X1 [Benincasa hispida]2.9e-12688.78Show/hide
Query:  MATPFSSTTTSVRRSVFQPKQNPPLKALLSLR----GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAAL
        MATPFSS TTSVRRSVFQ  QNPP KALLSLR    GL CVKCGSST HLCSWKSASNYV+L+R+ALVLSTQLSVSGNLLKNR                 
Subjt:  MATPFSSTTTSVRRSVFQPKQNPPLKALLSLR----GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAAL

Query:  RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD
        RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRS+FNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD
Subjt:  RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD

Query:  LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK
        LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKID I+KQKEK
Subjt:  LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK

XP_038888224.1 ribosome-recycling factor, chloroplastic isoform X2 [Benincasa hispida]1.5e-12588.44Show/hide
Query:  MATPFSSTTTSVRRSVFQPKQNPPLKALLSLR----GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAAL
        MATPFSS TTSVRRSVFQ  QNPP KALLSLR    GL CVKCGSST HLCSWKSASNYV+L+R+ALVLSTQLSVSGNLLKN                  
Subjt:  MATPFSSTTTSVRRSVFQPKQNPPLKALLSLR----GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAAL

Query:  RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD
        RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRS+FNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD
Subjt:  RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD

Query:  LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK
        LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKID I+KQKEK
Subjt:  LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK

TrEMBL top hitse value%identityAlignment
A0A0A0KJG4 Ribosome-recycling factor, chloroplastic6.8e-12185.03Show/hide
Query:  MATPFSSTTTSVRRSVFQPKQNPPLKALLSLR----GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAAL
        MATPFS+ T S+RRS+F   QNPP K+LLSLR    GL CVKCGS TAHLCSWKSASNYV+LNR+ALV+STQLSVSGN+ KNR                 
Subjt:  MATPFSSTTTSVRRSVFQPKQNPPLKALLSLR----GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAAL

Query:  RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD
        R VVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRS+FNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD
Subjt:  RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD

Query:  LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK
        LG+TPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKID ++KQKEK
Subjt:  LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK

A0A1S3BMN4 Ribosome-recycling factor, chloroplastic6.2e-12285.71Show/hide
Query:  MATPFSSTTTSVRRSVFQPKQNPPLKALLSLR----GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAAL
        MATPFS+ TTS+RRS+F    NPP K LLSLR    GL CVKCGSS+AHLCSWKSASNYV+LN+ AL+LSTQLSVSGN+LKNR                 
Subjt:  MATPFSSTTTSVRRSVFQPKQNPPLKALLSLR----GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAAL

Query:  RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD
        RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRS+FNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD
Subjt:  RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD

Query:  LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK
        LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKID ++KQKEK
Subjt:  LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK

A0A1S3BMY6 Ribosome-recycling factor, chloroplastic4.0e-12185.37Show/hide
Query:  MATPFSSTTTSVRRSVFQPKQNPPLKALLSLR----GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAAL
        MATPFS+ TTS+RRS+F    NPP K LLSLR    GL CVKCGSS+AHLCSWKSASNYV+LN+ AL+LSTQLSVSGN+LKN                  
Subjt:  MATPFSSTTTSVRRSVFQPKQNPPLKALLSLR----GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAAL

Query:  RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD
        RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRS+FNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD
Subjt:  RGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSD

Query:  LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK
        LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKID ++KQKEK
Subjt:  LGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK

A0A5A7URP7 Ribosome-recycling factor, chloroplastic1.6e-12290.44Show/hide
Query:  GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAA------LRGVVRAATIEEIEAEKTLIEKDVKARMEKT
        GL CVKCGSS+AHLCSWKSASNYV+LN+ AL+LSTQLSVSGN+LKNRHV  FYFVYFL  L A      L GVVRAATIEEIEAEKTLIEKDVKARMEKT
Subjt:  GLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAA------LRGVVRAATIEEIEAEKTLIEKDVKARMEKT

Query:  IDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKV
        IDTVRS+FNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKV
Subjt:  IDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKV

Query:  VAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEKVWSISTDL
        VAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKID ++KQKEKV SIS +L
Subjt:  VAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEKVWSISTDL

A0A6J1EYI0 Ribosome-recycling factor, chloroplastic1.1e-11581.38Show/hide
Query:  MATPFSSTTTSVRRSVFQPKQNPPLKALLSLRGLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAALRGVV
        MATPFSSTT+   RSVF+PKQ PP KALLS+RGL C+KCGS+T  L SWKSASNY+++ R AL+L TQ   SGNL K R                 RGV+
Subjt:  MATPFSSTTTSVRRSVFQPKQNPPLKALLSLRGLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAALRGVV

Query:  RAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLT
        RAATIEEIEAEK LIEKDV+ARMEKTIDTVRSSFNSIRTGR+NPAMLDKIEVEYYGSPV LKSIAQISTPDASSLL+QPYDKSSLKSIEKAIVNS+LG+T
Subjt:  RAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLT

Query:  PNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK
        PNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAY+KLEKEKKLSEDNVKDLSSDLQKLTDDYMKKID I+KQKEK
Subjt:  PNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK

SwissProt top hitse value%identityAlignment
A2YMU2 Ribosome-recycling factor, chloroplastic4.2e-7569.06Show/hide
Query:  LSVSGNLLKNR-HVLVFYFVYFLICLAALRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI
        LS S N +  R   + FY    ++  +  R V+R ATIEEIEAEK++IE   + RMEK I+TV+++FN++RTGR+NPAMLD+IEVEYYG+PV+LKSIAQI
Subjt:  LSVSGNLLKNR-HVLVFYFVYFLICLAALRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI

Query:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLS
        +TPDA+SLL+QPYDKSSLK IEK IV ++LG+TP+NDGEVIR+T+P LTS+RRKEL+K VAK AEEGKVA+RNIRRDA+KAY+KLEKEKKLSEDNVKDLS
Subjt:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLS

Query:  SDLQKLTDDYMKKIDAIHKQKEK
        +DLQK+TD+YMKKI+AI KQKE+
Subjt:  SDLQKLTDDYMKKIDAIHKQKEK

A3BLC3 Ribosome-recycling factor, chloroplastic4.2e-7569.06Show/hide
Query:  LSVSGNLLKNR-HVLVFYFVYFLICLAALRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI
        LS S N +  R   + FY    ++  +  R V+R ATIEEIEAEK++IE   + RMEK I+TV+++FN++RTGR+NPAMLD+IEVEYYG+PV+LKSIAQI
Subjt:  LSVSGNLLKNR-HVLVFYFVYFLICLAALRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQI

Query:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLS
        +TPDA+SLL+QPYDKSSLK IEK IV ++LG+TP+NDGEVIR+T+P LTS+RRKEL+K VAK AEEGKVA+RNIRRDA+KAY+KLEKEKKLSEDNVKDLS
Subjt:  STPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLS

Query:  SDLQKLTDDYMKKIDAIHKQKEK
        +DLQK+TD+YMKKI+AI KQKE+
Subjt:  SDLQKLTDDYMKKIDAIHKQKEK

P37706 Ribosome-recycling factor, chloroplastic (Fragment)4.3e-8066.27Show/hide
Query:  WKSASNYVKLN-------REALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAALRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGR
        W +A+NYVK+        R+ +VLS + +                           G ++ AT+EEIEAEK+LIEK VK RMEKTI+ V++SFNSIRT R
Subjt:  WKSASNYVKLN-------REALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAALRGVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGR

Query:  SNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNI
        SNP MLDKI+VEYYG+P SLKSIAQISTPD+SSLLV PYDKSSLK IEKAIVNSDLG+TPNNDG+VIRL++PQLT++RRKELSK+VAKQAEEGKVA+RNI
Subjt:  SNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNI

Query:  RRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK
        RRDA+K+Y+KLEKEKKLSEDNVKDLSSDLQK+ D+Y+KK+D+I KQKEK
Subjt:  RRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK

P82231 Ribosome-recycling factor, chloroplastic1.3e-8163.36Show/hide
Query:  LSLRGLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAALRGVVRAATIEEIEAEKTLIEKDVKARMEKTID
        +SL+G+  ++C  +  ++  W+S++NYV+++      S + +V    L+NR                  G  R AT+EE+EAEK+LIE + K RMEKTI+
Subjt:  LSLRGLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAALRGVVRAATIEEIEAEKTLIEKDVKARMEKTID

Query:  TVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVA
        T+RS+FNS+RT R++P MLD+IEVEYYG+PVSLKSIAQISTPDASSLL+ PYDKSSLK+IEKAIV S LG++PNNDGEVIRL+LP LTS+RRKEL+KVV+
Subjt:  TVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERRKELSKVVA

Query:  KQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK
        K AEEGKVAVRNIRRDALK+YEKLEKEKKLSEDNVKDLS+DLQKLTD+YMKK+++I+KQKE+
Subjt:  KQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK

Q9M1X0 Ribosome-recycling factor, chloroplastic7.1e-8363.36Show/hide
Query:  MATPFSSTTTSVRRSVFQPKQNPPLKAL--LSLRGLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAALRG
        MA  FSST  +     F+   + PL +L    LR +      S+    CS+K+         + L L   +++SG  +  R +               R 
Subjt:  MATPFSSTTTSVRRSVFQPKQNPPLKAL--LSLRGLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAALRG

Query:  VVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG
        V+R+ATIEEIEAEK+ IE DVK++MEKTI+T+R+SFNSIRTGRSN AMLDKIEVEYYGSPVSLKSIAQISTPD SSLL+QPYDKSSLK+IEKAIVNSDLG
Subjt:  VVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG

Query:  LTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK
        +TPNNDG+VIRL+LP LTS+RRKELSKVVAKQ+EEGKVA+RNIRRDALK+Y+KLEKEKKLSEDNVKDLSSDLQKL D YMKKI+ ++KQKEK
Subjt:  LTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK

Arabidopsis top hitse value%identityAlignment
AT3G01800.1 Ribosome recycling factor5.5e-2236.36Show/hide
Query:  IEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQ
        ++    ++ME  ID +      +RTGR+ P MLD I VE  G  + L  +A +S  D  +L V PYD  ++K +EKAIV S LGL P  DG+ +  ++P 
Subjt:  IEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQ

Query:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK
        LT E  + + K+V K +E  K ++R  R+ AL   +K      L +D VK L  ++ +LT  ++K  + + K KEK
Subjt:  LTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK

AT3G63190.1 ribosome recycling factor, chloroplast precursor5.0e-8463.36Show/hide
Query:  MATPFSSTTTSVRRSVFQPKQNPPLKAL--LSLRGLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAALRG
        MA  FSST  +     F+   + PL +L    LR +      S+    CS+K+         + L L   +++SG  +  R +               R 
Subjt:  MATPFSSTTTSVRRSVFQPKQNPPLKAL--LSLRGLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAALRG

Query:  VVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG
        V+R+ATIEEIEAEK+ IE DVK++MEKTI+T+R+SFNSIRTGRSN AMLDKIEVEYYGSPVSLKSIAQISTPD SSLL+QPYDKSSLK+IEKAIVNSDLG
Subjt:  VVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLG

Query:  LTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK
        +TPNNDG+VIRL+LP LTS+RRKELSKVVAKQ+EEGKVA+RNIRRDALK+Y+KLEKEKKLSEDNVKDLSSDLQKL D YMKKI+ ++KQKEK
Subjt:  LTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGCCTTTCTCCTCCACCACCACCTCCGTCCGCCGTTCCGTCTTCCAACCCAAGCAGAACCCCCCTCTCAAAGCCCTCCTCTCACTCCGAGGGTTAAAATGCGT
CAAGTGTGGCTCGAGTACGGCGCATCTTTGTTCATGGAAGTCAGCTTCAAACTACGTCAAGCTCAACCGGGAAGCCCTAGTGCTCTCAACCCAACTATCTGTTTCTGGGA
ATCTATTGAAAAACAGGCATGTCCTTGTCTTTTATTTCGTTTACTTTCTTATCTGTCTTGCGGCGTTAAGAGGAGTCGTGAGGGCTGCAACAATCGAAGAAATTGAAGCA
GAGAAAACATTAATTGAGAAAGATGTAAAAGCAAGGATGGAAAAGACTATCGATACTGTTCGGTCTAGTTTCAATTCAATTAGGACTGGGAGATCAAACCCTGCCATGCT
TGATAAGATTGAGGTGGAGTATTACGGCAGTCCAGTTAGCCTGAAGAGCATTGCTCAAATTAGTACACCTGATGCAAGCTCACTTTTGGTCCAGCCATATGATAAATCCA
GCTTAAAGTCAATAGAGAAGGCCATAGTCAACTCTGACTTGGGATTGACTCCAAACAATGATGGAGAAGTCATACGGTTGACTCTCCCTCAACTCACATCCGAAAGAAGA
AAGGAGTTGTCAAAAGTTGTTGCAAAGCAGGCAGAGGAAGGGAAGGTGGCAGTAAGGAATATAAGAAGAGATGCTTTGAAAGCGTATGAAAAATTGGAAAAGGAGAAAAA
ACTTTCGGAAGATAATGTCAAGGACTTGTCAAGCGATTTGCAGAAACTGACTGATGACTATATGAAGAAGATTGATGCCATACACAAGCAGAAAGAGAAGGTATGGTCCA
TCTCGACTGATTTAATTAAAGCACTCAAGACTTTAATCCATTCCACTGATTTAATTATGAATCCGGACACACAAGTATCGGTAGGATTTGATTTTGGATCTTCATTTCAC
GAATATTTGCAAGATCACTCACTGAACCTATTTTATTAG
mRNA sequenceShow/hide mRNA sequence
TTATTTTTCAAAATTCAAACTCAAATATCTTTTAATTCTTATCCACAACTGTGAAAGATTGGAATTTGGGTCAGCCATGGCCTGCTTTTGAACTTCAAACTATTTCCTTC
CGCCTTATCGTCTTCGATTCCATTCATTTCCGTATCCATGGCGACGCCTTTCTCCTCCACCACCACCTCCGTCCGCCGTTCCGTCTTCCAACCCAAGCAGAACCCCCCTC
TCAAAGCCCTCCTCTCACTCCGAGGGTTAAAATGCGTCAAGTGTGGCTCGAGTACGGCGCATCTTTGTTCATGGAAGTCAGCTTCAAACTACGTCAAGCTCAACCGGGAA
GCCCTAGTGCTCTCAACCCAACTATCTGTTTCTGGGAATCTATTGAAAAACAGGCATGTCCTTGTCTTTTATTTCGTTTACTTTCTTATCTGTCTTGCGGCGTTAAGAGG
AGTCGTGAGGGCTGCAACAATCGAAGAAATTGAAGCAGAGAAAACATTAATTGAGAAAGATGTAAAAGCAAGGATGGAAAAGACTATCGATACTGTTCGGTCTAGTTTCA
ATTCAATTAGGACTGGGAGATCAAACCCTGCCATGCTTGATAAGATTGAGGTGGAGTATTACGGCAGTCCAGTTAGCCTGAAGAGCATTGCTCAAATTAGTACACCTGAT
GCAAGCTCACTTTTGGTCCAGCCATATGATAAATCCAGCTTAAAGTCAATAGAGAAGGCCATAGTCAACTCTGACTTGGGATTGACTCCAAACAATGATGGAGAAGTCAT
ACGGTTGACTCTCCCTCAACTCACATCCGAAAGAAGAAAGGAGTTGTCAAAAGTTGTTGCAAAGCAGGCAGAGGAAGGGAAGGTGGCAGTAAGGAATATAAGAAGAGATG
CTTTGAAAGCGTATGAAAAATTGGAAAAGGAGAAAAAACTTTCGGAAGATAATGTCAAGGACTTGTCAAGCGATTTGCAGAAACTGACTGATGACTATATGAAGAAGATT
GATGCCATACACAAGCAGAAAGAGAAGGTATGGTCCATCTCGACTGATTTAATTAAAGCACTCAAGACTTTAATCCATTCCACTGATTTAATTATGAATCCGGACACACA
AGTATCGGTAGGATTTGATTTTGGATCTTCATTTCACGAATATTTGCAAGATCACTCACTGAACCTATTTTATTAGCCACAATAGTTTTCCACTCGTTTCTTGTATGTTA
GTAACATCATGACAACCAACGTGTATTTGTATTGTATTTCAGGAGTTGTTGAAGGTGTGACCAAAAGCAAA
Protein sequenceShow/hide protein sequence
MATPFSSTTTSVRRSVFQPKQNPPLKALLSLRGLKCVKCGSSTAHLCSWKSASNYVKLNREALVLSTQLSVSGNLLKNRHVLVFYFVYFLICLAALRGVVRAATIEEIEA
EKTLIEKDVKARMEKTIDTVRSSFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDLGLTPNNDGEVIRLTLPQLTSERR
KELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDAIHKQKEKVWSISTDLIKALKTLIHSTDLIMNPDTQVSVGFDFGSSFH
EYLQDHSLNLFY