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Lsi05G009400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G009400
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCarbonic anhydrase
Genome locationchr05:16545032..16547621
RNA-Seq ExpressionLsi05G009400
SyntenyLsi05G009400
Gene Ontology termsGO:0015976 - carbon utilization (biological process)
GO:0004089 - carbonate dehydratase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001765 - Carbonic anhydrase
IPR036874 - Carbonic anhydrase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022934868.1 carbonic anhydrase 2-like isoform X1 [Cucurbita moschata]8.1e-3579.8Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA                   KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHY F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

XP_022934869.1 carbonic anhydrase 2-like isoform X2 [Cucurbita moschata]8.1e-3579.8Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA                   KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHY F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

XP_022982751.1 carbonic anhydrase 2-like isoform X1 [Cucurbita maxima]8.1e-3579.8Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA                   KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHY F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

XP_022982752.1 carbonic anhydrase 2-like isoform X2 [Cucurbita maxima]8.1e-3579.8Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA                   KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHY F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

XP_023527308.1 carbonic anhydrase 2-like isoform X1 [Cucurbita pepo subsp. pepo]8.1e-3579.8Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA                   KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHY F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

TrEMBL top hitse value%identityAlignment
A0A6J1DYE8 Carbonic anhydrase1.9e-3478.79Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA                   KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGG+Y F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

A0A6J1F3T2 Carbonic anhydrase3.9e-3579.8Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA                   KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHY F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

A0A6J1F8Y2 Carbonic anhydrase3.9e-3579.8Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA                   KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHY F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

A0A6J1IXF1 Carbonic anhydrase3.9e-3579.8Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA                   KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHY F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

A0A6J1J082 Carbonic anhydrase3.9e-3579.8Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA                   KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHY F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

SwissProt top hitse value%identityAlignment
P17067 Carbonic anhydrase, chloroplastic1.3e-3068.69Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KV  IVVIGHSACGGIKGL++FPFDG YSTDFIEEWVKIGLPAKA                   KEAV  SLGNLLTYPFVR+GLVN TL LKGG+Y F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

P27140 Beta carbonic anhydrase 1, chloroplastic2.0e-2865.66Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKAK-------------------EAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KV+ IVVIGHSACGGIKGLM+FP DGN STDFIE+WVKI LPAK+K                   EAV VSL NLLTYPFVR+GLV GTL LKGG+Y F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKAK-------------------EAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

P27141 Carbonic anhydrase, chloroplastic7.6e-2865.66Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KV+ IVVIGHSACGGIKGLM+ P DG+ ST FIE+WVKIGLPAKA                   KEAV VSLGNLLTYPFVR+GLV  TL LKGGHY F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

P42737 Beta carbonic anhydrase 2, chloroplastic4.5e-2864.65Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKAK-------------------EAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KV+ IVVIGHSACGGIKGLM+FP DGN STDFIE+WVKI LPAK+K                   EAV VSL NLLTYPFVR+G+V GTL LKGG+Y F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKAK-------------------EAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

P46512 Carbonic anhydrase 19.9e-2864.65Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KVQ I VIGHS CGGIKGLMTFP +G +STDFIE+WVK+ LPAK+                   KEAV VSLGNLLTYPFVRDGL N TL LKGGHY F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKA-------------------KEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

Arabidopsis top hitse value%identityAlignment
AT3G01500.1 carbonic anhydrase 11.4e-2965.66Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKAK-------------------EAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KV+ IVVIGHSACGGIKGLM+FP DGN STDFIE+WVKI LPAK+K                   EAV VSL NLLTYPFVR+GLV GTL LKGG+Y F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKAK-------------------EAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

AT3G01500.2 carbonic anhydrase 11.4e-2965.66Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKAK-------------------EAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KV+ IVVIGHSACGGIKGLM+FP DGN STDFIE+WVKI LPAK+K                   EAV VSL NLLTYPFVR+GLV GTL LKGG+Y F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKAK-------------------EAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

AT3G01500.3 carbonic anhydrase 11.4e-2965.66Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKAK-------------------EAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KV+ IVVIGHSACGGIKGLM+FP DGN STDFIE+WVKI LPAK+K                   EAV VSL NLLTYPFVR+GLV GTL LKGG+Y F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKAK-------------------EAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

AT5G14740.1 carbonic anhydrase 23.2e-2964.65Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKAK-------------------EAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KV+ IVVIGHSACGGIKGLM+FP DGN STDFIE+WVKI LPAK+K                   EAV VSL NLLTYPFVR+G+V GTL LKGG+Y F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKAK-------------------EAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF

AT5G14740.2 carbonic anhydrase 23.2e-2964.65Show/hide
Query:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKAK-------------------EAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF
        KV+ IVVIGHSACGGIKGLM+FP DGN STDFIE+WVKI LPAK+K                   EAV VSL NLLTYPFVR+G+V GTL LKGG+Y F
Subjt:  KVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKAK-------------------EAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTTCTTCATCTCAAGGTATATAAAAAACTTCAAATATGCCCTTTTTAATTCAGAAATAAAGAAATGTAAGGTGCAATACATTGTTGTGATTGGTCACAGTGCTTG
TGGTGGTATTAAGGGGCTCATGACTTTTCCATTTGATGGAAACTACTCAACTGATTTCATTGAAGAATGGGTGAAAATTGGTTTGCCTGCTAAGGCCAAGGAAGCAGTTG
GTGTATCACTTGGGAATCTGCTAACCTATCCATTTGTTAGGGATGGTTTGGTGAATGGAACTCTTGGACTCAAGGGTGGTCACTACTCTTTCTTTGTTAGTTTTCTTGAT
GCAAATGAAGGTCACTATAACCCAAAAATTTCACCTGCTATGCCTAAGAGCAAAATGAAGAAAAGGTCGCAGGTCAACAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGTTCTTCATCTCAAGGTATATAAAAAACTTCAAATATGCCCTTTTTAATTCAGAAATAAAGAAATGTAAGGTGCAATACATTGTTGTGATTGGTCACAGTGCTTG
TGGTGGTATTAAGGGGCTCATGACTTTTCCATTTGATGGAAACTACTCAACTGATTTCATTGAAGAATGGGTGAAAATTGGTTTGCCTGCTAAGGCCAAGGAAGCAGTTG
GTGTATCACTTGGGAATCTGCTAACCTATCCATTTGTTAGGGATGGTTTGGTGAATGGAACTCTTGGACTCAAGGGTGGTCACTACTCTTTCTTTGTTAGTTTTCTTGAT
GCAAATGAAGGTCACTATAACCCAAAAATTTCACCTGCTATGCCTAAGAGCAAAATGAAGAAAAGGTCGCAGGTCAACAATTAAATAAACAACGACTCTTGTTGATTTGA
AGAGGAACAAGTCGTCAAGCCAATATTTGATTTCAAGGAGTTGAGGATAACATCTGATAAGACTTTGACTTTGGAGATACCTAAGAGTGTTGTGGTACTTGGAGGGTGCA
GGTCTCTTTTTTATTATTACATATGCTCTGTGTTTTATAATAAGGATCATAACTCGTCTTGTATTTAAAGTTTTGTTTATCTCTATAAATTGAATGTAGTTTGTGGAGAG
ACGAATAGCCATATTACTTTTGTTGGAGTGAATTAGTTAATTGTTGTGTTTGCTGAAAGTTGAGTTATGGTTGGTGTATACAAATATCATATGTATAGAAATATTAATTT
TGTTAGTCAGCCATGTATGCAACCAATAATATTTTTTTTAATTTTTTA
Protein sequenceShow/hide protein sequence
MMFFISRYIKNFKYALFNSEIKKCKVQYIVVIGHSACGGIKGLMTFPFDGNYSTDFIEEWVKIGLPAKAKEAVGVSLGNLLTYPFVRDGLVNGTLGLKGGHYSFFVSFLD
ANEGHYNPKISPAMPKSKMKKRSQVNN