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Lsi05G009930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G009930
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTranscription factor bHLH3
Genome locationchr05:17347717..17351969
RNA-Seq ExpressionLsi05G009930
SyntenyLsi05G009930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA3005161.1 Hypothetical predicted protein [Olea europaea subsp. europaea]5.1e-0549.15Show/hide
Query:  MNTPLISFVIIQKICTQIEAMRPLKEEQWPK--LISQSLQRAPVPPSGPNPCTNIPGQG
        +N   I  +    I +++ A+RPL+ EQW K  L+ QSL R P+PPSG NPCT IPG+G
Subjt:  MNTPLISFVIIQKICTQIEAMRPLKEEQWPK--LISQSLQRAPVPPSGPNPCTNIPGQG
CAB4291562.1 unnamed protein product [Prunus armeniaca]3.0e-0549.25Show/hide
Query:  TPLISFVIIQKI---CTQIEAMRPLKEEQWPK-----LISQSLQRAPVPPSGPNPCTNIPGQGNVPC
        T L S +++  I   C Q+  MR LK EQW K     L+SQ L R   PPSGPNPCT+IPG+G+  C
Subjt:  TPLISFVIIQKI---CTQIEAMRPLKEEQWPK-----LISQSLQRAPVPPSGPNPCTNIPGQGNVPC
GAV66766.1 hypothetical protein CFOL_v3_10276 [Cephalotus follicularis]3.5e-0650Show/hide
Query:  MEEEKEMNTPLISFVIIQKIC-TQIEAMRPLKEEQW--PKLISQSLQRAPVPPSGPNPCTNIPGQGNVPC
        M   K   T +I  ++   +C  QI AMRPL+ EQW   +++ QSLQR PV PSGPNPCT IPG+G   C
Subjt:  MEEEKEMNTPLISFVIIQKIC-TQIEAMRPLKEEQW--PKLISQSLQRAPVPPSGPNPCTNIPGQGNVPC
ONH93371.1 hypothetical protein PRUPE_8G228600 [Prunus persica]3.0e-0549.25Show/hide
Query:  TPLISFVIIQKI---CTQIEAMRPLKEEQWPK-----LISQSLQRAPVPPSGPNPCTNIPGQGNVPC
        T L S +++  I   C Q+  MR LK EQW K     L+SQ L R   PPSGPNPCT+IPG+G+  C
Subjt:  TPLISFVIIQKI---CTQIEAMRPLKEEQWPK-----LISQSLQRAPVPPSGPNPCTNIPGQGNVPC
XP_006417956.1 uncharacterized protein LOC18994259 [Eutrema salsugineum]5.1e-0545.9Show/hide
Query:  MEEEKEMNTPLISFVIIQKICTQIEAMRPLKEEQWPKLISQSLQRAPVPPSGPNPCTNIPG
        M+ +  +   L+ F++I    TQ+EA RP + +   + + Q LQR PVPPSGPN CTNIPG
Subjt:  MEEEKEMNTPLISFVIIQKICTQIEAMRPLKEEQWPKLISQSLQRAPVPPSGPNPCTNIPG
TrEMBL top hitse value%identityAlignment
A0A1Q3BFG1 Uncharacterized protein1.7e-0650Show/hide
Query:  MEEEKEMNTPLISFVIIQKIC-TQIEAMRPLKEEQW--PKLISQSLQRAPVPPSGPNPCTNIPGQGNVPC
        M   K   T +I  ++   +C  QI AMRPL+ EQW   +++ QSLQR PV PSGPNPCT IPG+G   C
Subjt:  MEEEKEMNTPLISFVIIQKIC-TQIEAMRPLKEEQW--PKLISQSLQRAPVPPSGPNPCTNIPGQGNVPC
A0A5B6Z7Q1 Uncharacterized protein (Fragment)2.9e-0655Show/hide
Query:  LISFVIIQKIC-TQIEAMRPLKEEQWPK--LISQSLQRAPVPPSGPNPCTNIPGQGNVPC
        ++ F+I   +C  Q+ AMRPL+EEQW K  L  QSL R PVP SG NPCT IPG+G   C
Subjt:  LISFVIIQKIC-TQIEAMRPLKEEQWPK--LISQSLQRAPVPPSGPNPCTNIPGQGNVPC
A0A6J5Y6W4 Uncharacterized protein1.4e-0549.25Show/hide
Query:  TPLISFVIIQKI---CTQIEAMRPLKEEQWPK-----LISQSLQRAPVPPSGPNPCTNIPGQGNVPC
        T L S +++  I   C Q+  MR LK EQW K     L+SQ L R   PPSGPNPCT+IPG+G+  C
Subjt:  TPLISFVIIQKI---CTQIEAMRPLKEEQWPK-----LISQSLQRAPVPPSGPNPCTNIPGQGNVPC
M5VP99 Uncharacterized protein1.4e-0549.25Show/hide
Query:  TPLISFVIIQKI---CTQIEAMRPLKEEQWPK-----LISQSLQRAPVPPSGPNPCTNIPGQGNVPC
        T L S +++  I   C Q+  MR LK EQW K     L+SQ L R   PPSGPNPCT+IPG+G+  C
Subjt:  TPLISFVIIQKI---CTQIEAMRPLKEEQWPK-----LISQSLQRAPVPPSGPNPCTNIPGQGNVPC
V4KY87 Uncharacterized protein2.5e-0545.9Show/hide
Query:  MEEEKEMNTPLISFVIIQKICTQIEAMRPLKEEQWPKLISQSLQRAPVPPSGPNPCTNIPG
        M+ +  +   L+ F++I    TQ+EA RP + +   + + Q LQR PVPPSGPN CTNIPG
Subjt:  MEEEKEMNTPLISFVIIQKICTQIEAMRPLKEEQWPKLISQSLQRAPVPPSGPNPCTNIPG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06135.1 unknown protein2.1e-0445.1Show/hide
Query:  LISFVIIQKICTQIEAMRPL-KEEQWPKLISQSLQRAPVPPSGPNPCTNIP
        L++F ++     Q+EAMRP        + + Q+LQR PV  SGPN CTNIP
Subjt:  LISFVIIQKICTQIEAMRPL-KEEQWPKLISQSLQRAPVPPSGPNPCTNIP
AT1G06137.1 unknown protein1.4e-0539.71Show/hide
Query:  MEEEKEMNTPLISFVIIQKICTQIEAMRPLKEEQWPKLISQSLQRAPVPPSGPNPCTNIPGQGNVPCQ
        M+++  +   L+   +I    TQ+EA RPL+ +   + + Q LQR  V  SGPN CTNIPG G+  C+
Subjt:  MEEEKEMNTPLISFVIIQKICTQIEAMRPLKEEQWPKLISQSLQRAPVPPSGPNPCTNIPGQGNVPCQ
AT2G31345.1 unknown protein7.8e-0439.34Show/hide
Query:  MEEEKEMNTPLISFVIIQKICTQIEAMRPLKEE-QWPKLISQSLQRAPVPPSGPNPCTNIP
        M+++  +   L+   ++    TQ+EAMRP  +     +L+ Q+LQR PV  SG N CTNIP
Subjt:  MEEEKEMNTPLISFVIIQKICTQIEAMRPLKEE-QWPKLISQSLQRAPVPPSGPNPCTNIP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAATATTTGAAAACTTTTAATCAAAGATGGATGGAAGAAGAAAAAGAGATGAACACTCCCCTGATATCATTTGTCATAATTCAAAAAATTTGTACACAAATTGA
AGCGATGAGACCATTGAAAGAAGAACAATGGCCGAAGTTAATTTCTCAGTCACTGCAACGGGCGCCGGTGCCACCGTCGGGGCCGAACCCGTGTACAAATATTCCCGGAC
AAGGGAATGTTCCTTGTCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAATATTTGAAAACTTTTAATCAAAGATGGATGGAAGAAGAAAAAGAGATGAACACTCCCCTGATATCATTTGTCATAATTCAAAAAATTTGTACACAAATTGA
AGCGATGAGACCATTGAAAGAAGAACAATGGCCGAAGTTAATTTCTCAGTCACTGCAACGGGCGCCGGTGCCACCGTCGGGGCCGAACCCGTGTACAAATATTCCCGGAC
AAGGGAATGTTCCTTGTCAATAG
Protein sequenceShow/hide protein sequence
MGKYLKTFNQRWMEEEKEMNTPLISFVIIQKICTQIEAMRPLKEEQWPKLISQSLQRAPVPPSGPNPCTNIPGQGNVPCQ