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Lsi05G009940 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G009940
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:17364153..17364413
RNA-Seq ExpressionLsi05G009940
SyntenyLsi05G009940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571501.1 hypothetical protein SDJN03_28229, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1656.98Show/hide
Query:  MKIQFSFLFAILLLLINTHKLEGGRIMKEENQKWSTVMLLQSLERAPVPPSARNGGTNIPVPVRPRAFAGKSSSAPLPVQPYQNHV
        MKIQF+FL AIL++L N H+L+  R MKE+ QKWS ++L QSL+R PVPPSA+NGGT IP  +  RAF GKS+  P P   Y + V
Subjt:  MKIQFSFLFAILLLLINTHKLEGGRIMKEENQKWSTVMLLQSLERAPVPPSARNGGTNIPVPVRPRAFAGKSSSAPLPVQPYQNHV
KAG6571503.1 hypothetical protein SDJN03_28231, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1859.3Show/hide
Query:  MKIQFSFLFAILLLLINTHKLEGGRIMKEENQKWSTVMLLQSLERAPVPPSARNGGTNIPVPVRPRAFAGKSSSAPLPVQPYQNHV
        MKIQF+FL AIL++L N H+L+  R MKE+ QKWS ++L QSL+RAPVPPSA+NGGT IPVP+  R+F GKS+  P P   Y + V
Subjt:  MKIQFSFLFAILLLLINTHKLEGGRIMKEENQKWSTVMLLQSLERAPVPPSARNGGTNIPVPVRPRAFAGKSSSAPLPVQPYQNHV
KAG6571504.1 hypothetical protein SDJN03_28232, partial [Cucurbita argyrosperma subsp. sororia]9.6e-1858.14Show/hide
Query:  MKIQFSFLFAILLLLINTHKLEGGRIMKEENQKWSTVMLLQSLERAPVPPSARNGGTNIPVPVRPRAFAGKSSSAPLPVQPYQNHV
        MKIQF+FL AIL++L N H+L+  R MKE+ QKWS ++L QSL+RAPVPP+A+NGGT IP P+  RAF GKS+  P P   Y + V
Subjt:  MKIQFSFLFAILLLLINTHKLEGGRIMKEENQKWSTVMLLQSLERAPVPPSARNGGTNIPVPVRPRAFAGKSSSAPLPVQPYQNHV
KAG6571505.1 hypothetical protein SDJN03_28233, partial [Cucurbita argyrosperma subsp. sororia]2.8e-1759.3Show/hide
Query:  MKIQFSFLFAILLLLINTHKLEGGRIMKEENQKWSTVMLLQSLERAPVPPSARNGGTNIPVPVRPRAFAGKSSSAPLPVQPYQNHV
        MKIQF+FL AI++LL N H+L+  R MK++ QKWS ++L QSL+RAPVPPSA+NGGT IPVP+  RAF GKS+  P P   Y + V
Subjt:  MKIQFSFLFAILLLLINTHKLEGGRIMKEENQKWSTVMLLQSLERAPVPPSARNGGTNIPVPVRPRAFAGKSSSAPLPVQPYQNHV
KGN57926.1 hypothetical protein Csa_011112 [Cucumis sativus]2.4e-1664.94Show/hide
Query:  MKIQFSFLFAILLLLINTHKLEGGRIMKEENQKWS--TVMLLQSLERAPVPPSARNGGTNIPVPVRPRAFAGKSSSA
        MKIQFSFL AIL+LL NTH L+  R +K++ Q WS    +L QSL+R PVPPSA+NG TNIPVPV  RAFAGK+S+A
Subjt:  MKIQFSFLFAILLLLINTHKLEGGRIMKEENQKWS--TVMLLQSLERAPVPPSARNGGTNIPVPVRPRAFAGKSSSA
TrEMBL top hitse value%identityAlignment
A0A0A0LCY5 Uncharacterized protein1.1e-1664.94Show/hide
Query:  MKIQFSFLFAILLLLINTHKLEGGRIMKEENQKWS--TVMLLQSLERAPVPPSARNGGTNIPVPVRPRAFAGKSSSA
        MKIQFSFL AIL+LL NTH L+  R +K++ Q WS    +L QSL+R PVPPSA+NG TNIPVPV  RAFAGK+S+A
Subjt:  MKIQFSFLFAILLLLINTHKLEGGRIMKEENQKWS--TVMLLQSLERAPVPPSARNGGTNIPVPVRPRAFAGKSSSA
A0A5D3B777 Uncharacterized protein1.3e-1560.53Show/hide
Query:  MKIQFSFLFAILLLLINTHKLEGGRIMKEENQKWSTVMLLQSLERAPVPPSARNGGTNIPVPVRPRAFAGKSSSAP
        MKIQF+F FAIL+LL N H L+  R MK++ +KWS +++ QSL+RAPVPPS R+G TNIPVP+  +AFAGKS+  P
Subjt:  MKIQFSFLFAILLLLINTHKLEGGRIMKEENQKWSTVMLLQSLERAPVPPSARNGGTNIPVPVRPRAFAGKSSSAP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCCAATTTTCTTTCCTTTTTGCCATTTTGCTTCTTCTTATCAACACTCATAAGCTTGAAGGTGGCAGAATAATGAAAGAAGAGAACCAAAAATGGTCAACGGT
GATGCTTCTCCAGTCATTGGAGAGGGCACCGGTTCCTCCCTCTGCAAGAAATGGTGGCACCAATATTCCAGTGCCGGTCCGGCCTAGGGCTTTCGCTGGAAAATCCAGTT
CGGCACCATTGCCGGTACAACCCTATCAAAATCATGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGATCCAATTTTCTTTCCTTTTTGCCATTTTGCTTCTTCTTATCAACACTCATAAGCTTGAAGGTGGCAGAATAATGAAAGAAGAGAACCAAAAATGGTCAACGGT
GATGCTTCTCCAGTCATTGGAGAGGGCACCGGTTCCTCCCTCTGCAAGAAATGGTGGCACCAATATTCCAGTGCCGGTCCGGCCTAGGGCTTTCGCTGGAAAATCCAGTT
CGGCACCATTGCCGGTACAACCCTATCAAAATCATGTTTAG
Protein sequenceShow/hide protein sequence
MKIQFSFLFAILLLLINTHKLEGGRIMKEENQKWSTVMLLQSLERAPVPPSARNGGTNIPVPVRPRAFAGKSSSAPLPVQPYQNHV